Package evaluation of AtomicStructure on Julia 1.13.0-DEV.1234 (bbaa34b41d*) started at 2025-10-02T01:51:15.976 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.99s ################################################################################ # Installation # Installing AtomicStructure... Resolving package versions... Installed CompositionsBase ──────────── v0.1.2 Installed DiffResults ───────────────── v1.1.0 Installed MacroTools ────────────────── v0.5.16 Installed CommonSolve ───────────────── v0.2.4 Installed FillArrays ────────────────── v1.14.0 Installed ForwardDiff ───────────────── v0.10.39 Installed Formatting ────────────────── v0.4.3 Installed DataStructures ────────────── v0.19.1 Installed Adapt ─────────────────────── v4.4.0 Installed HalfIntegers ──────────────── v1.6.0 Installed ConstructionBase ──────────── v1.6.0 Installed AliasTables ───────────────── v1.1.3 Installed StatsBase ─────────────────── v0.34.6 Installed ArnoldiMethod ─────────────── v0.2.0 Installed Optim ─────────────────────── v1.11.0 Installed UnicodeFun ────────────────── v0.4.1 Installed OrderedCollections ────────── v1.8.1 Installed ArrayInterface ────────────── v7.10.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Compat ────────────────────── v4.18.1 Installed QuasiArrays ───────────────── v0.9.8 Installed Combinatorics ─────────────── v1.0.3 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed PositiveFactorizations ────── v0.2.4 Installed Statistics ────────────────── v1.11.1 Installed BlockBandedMatrices ───────── v0.12.10 Installed PrecompileTools ───────────── v1.3.3 Installed DataValueInterfaces ───────── v1.0.0 Installed LazyArrays ────────────────── v1.10.0 Installed StatsAPI ──────────────────── v1.7.1 Installed ProgressMeter ─────────────── v1.11.0 Installed DomainSets ────────────────── v0.6.7 Installed OffsetArrays ──────────────── v1.17.0 Installed StaticArraysCore ──────────── v1.4.3 Installed UnitfulAtomic ─────────────── v1.0.0 Installed CommonSubexpressions ──────── v0.3.1 Installed AngularMomentumAlgebra ────── v0.3.2 Installed EnergyExpressions ─────────── v0.1.4 Installed FastGaussQuadrature ───────── v0.5.1 Installed StaticArrays ──────────────── v1.9.15 Installed AtomicStructure ───────────── v0.1.8 Installed IrrationalConstants ───────── v0.2.4 Installed StringManipulation ────────── v0.4.1 Installed AbstractFFTs ──────────────── v1.5.0 Installed IntegerMathUtils ──────────── v0.1.3 Installed NaNMath ───────────────────── v1.1.3 Installed Infinities ────────────────── v0.1.11 Installed ContinuumArrays ───────────── v0.12.6 Installed Requires ──────────────────── v1.3.1 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed ArrayLayouts ──────────────── v1.11.2 Installed DiffRules ─────────────────── v1.15.1 Installed LogExpFunctions ───────────── v0.3.29 Installed Roots ─────────────────────── v2.2.10 Installed MatrixFactorizations ──────── v2.2.0 Installed PrettyTables ──────────────── v2.4.0 Installed FiniteDiff ────────────────── v2.23.1 Installed PtrArrays ─────────────────── v1.3.0 Installed Parameters ────────────────── v0.12.3 Installed Tables ────────────────────── v1.12.1 Installed Unitful ───────────────────── v1.25.0 Installed NLSolversBase ─────────────── v7.8.3 Installed InverseFunctions ──────────── v0.1.17 Installed SolverTraces ──────────────── v0.1.3 Installed SpecialFunctions ──────────── v2.5.1 Installed CoulombIntegrals ──────────── v0.1.5 Installed AtomicLevels ──────────────── v0.1.10 Installed BlockArrays ───────────────── v0.16.43 Installed BandedMatrices ────────────── v0.17.38 Installed Reexport ──────────────────── v1.2.2 Installed IntervalSets ──────────────── v0.7.11 Installed Setfield ──────────────────── v1.1.2 Installed Missings ──────────────────── v1.2.0 Installed JLLWrappers ───────────────── v1.7.1 Installed Preferences ───────────────── v1.5.0 Installed CompositeTypes ────────────── v0.1.4 Installed TableTraits ───────────────── v1.0.1 Installed IterativeSolvers ──────────── v0.9.4 Installed Crayons ───────────────────── v4.1.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed LineSearches ──────────────── v7.4.0 Installed LRUCache ──────────────────── v1.6.2 Installed Primes ────────────────────── v0.5.7 Installed SortingAlgorithms ─────────── v1.2.2 Installed Format ────────────────────── v1.3.7 Installed WignerSymbols ─────────────── v2.0.0 Installed UnPack ────────────────────── v1.0.2 Installed DocStringExtensions ───────── v0.9.5 Installed Accessors ─────────────────── v0.1.42 Installed RationalRoots ─────────────── v0.2.1 Installed InfiniteArrays ────────────── v0.12.15 Installed CompactBases ──────────────── v0.3.14 Installing 1 artifacts Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.13/Project.toml` [e24b7630] + AtomicStructure v0.1.8 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [0bb1b1ac] + AngularMomentumAlgebra v0.3.2 ⌅ [ec485272] + ArnoldiMethod v0.2.0 ⌃ [4fba245c] + ArrayInterface v7.10.0 [4c555306] + ArrayLayouts v1.11.2 ⌃ [10933b4c] + AtomicLevels v0.1.10 [e24b7630] + AtomicStructure v0.1.8 ⌅ [aae01518] + BandedMatrices v0.17.38 ⌅ [8e7c35d0] + BlockArrays v0.16.43 ⌅ [ffab5731] + BlockBandedMatrices v0.12.10 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [2c0377a8] + CompactBases v0.3.14 [34da2185] + Compat v4.18.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 ⌅ [7ae1f121] + ContinuumArrays v0.12.6 [42e5845a] + CoulombIntegrals v0.1.5 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.1 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 ⌅ [5b8099bc] + DomainSets v0.6.7 [f4b57a2e] + EnergyExpressions v0.1.4 ⌅ [442a2c76] + FastGaussQuadrature v0.5.1 [1a297f60] + FillArrays v1.14.0 ⌃ [6a86dc24] + FiniteDiff v2.23.1 [1fa38f19] + Format v1.3.7 [59287772] + Formatting v0.4.3 ⌅ [f6369f11] + ForwardDiff v0.10.39 [f0d1745a] + HalfIntegers v1.6.0 ⌅ [4858937d] + InfiniteArrays v0.12.15 [e1ba4f0e] + Infinities v0.1.11 [18e54dd8] + IntegerMathUtils v0.1.3 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 ⌅ [5078a376] + LazyArrays v1.10.0 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 ⌅ [a3b82374] + MatrixFactorizations v2.2.0 [e1d29d7a] + Missings v1.2.0 ⌃ [d41bc354] + NLSolversBase v7.8.3 [77ba4419] + NaNMath v1.1.3 [6fe1bfb0] + OffsetArrays v1.17.0 ⌃ [429524aa] + Optim v1.11.0 [bac558e1] + OrderedCollections v1.8.1 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 ⌅ [c4ea9172] + QuasiArrays v0.9.8 [308eb6b3] + RationalRoots v0.2.1 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [f2b01f46] + Roots v2.2.10 [efcf1570] + Setfield v1.1.2 [619b3e1a] + SolverTraces v0.1.3 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.25.0 [a7773ee8] + UnitfulAtomic v1.0.0 [9f57e263] + WignerSymbols v2.0.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 10.51s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4697.4 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: Optim Failed to precompile Optim [429524aa-4258-5aef-a3af-852621145aeb] to "/home/pkgeval/.julia/compiled/v1.13/Optim/jl_Dna4at" (ProcessExited(1)). ERROR: LoadError: syntax: misplaced "global" declaration Stacktrace: [1] top-level scope @ ~/.julia/packages/Optim/HvjCd/src/Optim.jl:223 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3072 [4] top-level scope @ stdin:5 [5] eval(m::Module, e::Any) @ Core ./boot.jl:489 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2918 [7] include_string @ ./loading.jl:2928 [inlined] [8] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [9] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Optim/HvjCd/src/Optim.jl:1 in expression starting at stdin:5 AtomicStructure Failed to precompile AtomicStructure [e24b7630-0518-11e9-1346-1188d3abce50] to "/home/pkgeval/.julia/compiled/v1.13/AtomicStructure/jl_5mzRHU" (ProcessExited(1)). ERROR: LoadError: syntax: misplaced "global" declaration Stacktrace: [1] top-level scope @ ~/.julia/packages/Optim/HvjCd/src/Optim.jl:223 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3072 [4] top-level scope @ stdin:5 [5] eval(m::Module, e::Any) @ Core ./boot.jl:489 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2918 [7] include_string @ ./loading.jl:2928 [inlined] [8] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [9] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Optim/HvjCd/src/Optim.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Optim [429524aa-4258-5aef-a3af-852621145aeb] to "/home/pkgeval/.julia/compiled/v1.13/Optim/jl_KgPVgU" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, loadable_exts::Nothing) @ Base ./loading.jl:3357 [3] kwcall(::@NamedTuple{loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3237 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2698 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#234 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3928 [11] maybe_cachefile_lock @ ./loading.jl:3925 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2673 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2511 [14] macro expansion @ ./loading.jl:2439 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2403 [17] require @ ./loading.jl:2379 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/AtomicStructure/DDEEr/src/SCF/SCF.jl:10 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [23] top-level scope @ ~/.julia/packages/AtomicStructure/DDEEr/src/AtomicStructure.jl:35 [24] include(mod::Module, _path::String) @ Base ./Base.jl:309 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3072 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2918 [29] include_string @ ./loading.jl:2928 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [31] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/AtomicStructure/DDEEr/src/SCF/SCF.jl:1 in expression starting at /home/pkgeval/.julia/packages/AtomicStructure/DDEEr/src/AtomicStructure.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 542.46s ################################################################################ # Testing # Testing AtomicStructure Status `/tmp/jl_r2y7td/Project.toml` [0bb1b1ac] AngularMomentumAlgebra v0.3.2 ⌅ [ec485272] ArnoldiMethod v0.2.0 [4c555306] ArrayLayouts v1.11.2 ⌃ [10933b4c] AtomicLevels v0.1.10 [e24b7630] AtomicStructure v0.1.8 ⌅ [aae01518] BandedMatrices v0.17.38 ⌅ [ffab5731] BlockBandedMatrices v0.12.10 [2c0377a8] CompactBases v0.3.14 [34da2185] Compat v4.18.1 ⌅ [7ae1f121] ContinuumArrays v0.12.6 [42e5845a] CoulombIntegrals v0.1.5 [a8cc5b0e] Crayons v4.1.1 [f4b57a2e] EnergyExpressions v0.1.4 [1a297f60] FillArrays v1.14.0 [59287772] Formatting v0.4.3 [f0d1745a] HalfIntegers v1.6.0 [8197267c] IntervalSets v0.7.11 [42fd0dbc] IterativeSolvers v0.9.4 ⌅ [5078a376] LazyArrays v1.10.0 [d3d80556] LineSearches v7.4.0 ⌃ [429524aa] Optim v1.11.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [92933f4c] ProgressMeter v1.11.0 ⌅ [c4ea9172] QuasiArrays v0.9.8 [f2b01f46] Roots v2.2.10 [619b3e1a] SolverTraces v0.1.3 [1cfade01] UnicodeFun v0.4.1 [1986cc42] Unitful v1.25.0 [a7773ee8] UnitfulAtomic v1.0.0 [9f57e263] WignerSymbols v2.0.0 [37e2e46d] LinearAlgebra v1.13.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_r2y7td/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [0bb1b1ac] AngularMomentumAlgebra v0.3.2 ⌅ [ec485272] ArnoldiMethod v0.2.0 ⌃ [4fba245c] ArrayInterface v7.10.0 [4c555306] ArrayLayouts v1.11.2 ⌃ [10933b4c] AtomicLevels v0.1.10 [e24b7630] AtomicStructure v0.1.8 ⌅ [aae01518] BandedMatrices v0.17.38 ⌅ [8e7c35d0] BlockArrays v0.16.43 ⌅ [ffab5731] BlockBandedMatrices v0.12.10 [861a8166] Combinatorics v1.0.3 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [2c0377a8] CompactBases v0.3.14 [34da2185] Compat v4.18.1 [b152e2b5] CompositeTypes v0.1.4 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 ⌅ [7ae1f121] ContinuumArrays v0.12.6 [42e5845a] CoulombIntegrals v0.1.5 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.1 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [ffbed154] DocStringExtensions v0.9.5 ⌅ [5b8099bc] DomainSets v0.6.7 [f4b57a2e] EnergyExpressions v0.1.4 ⌅ [442a2c76] FastGaussQuadrature v0.5.1 [1a297f60] FillArrays v1.14.0 ⌃ [6a86dc24] FiniteDiff v2.23.1 [1fa38f19] Format v1.3.7 [59287772] Formatting v0.4.3 ⌅ [f6369f11] ForwardDiff v0.10.39 [f0d1745a] HalfIntegers v1.6.0 ⌅ [4858937d] InfiniteArrays v0.12.15 [e1ba4f0e] Infinities v0.1.11 [18e54dd8] IntegerMathUtils v0.1.3 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [42fd0dbc] IterativeSolvers v0.9.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 ⌅ [5078a376] LazyArrays v1.10.0 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 ⌅ [a3b82374] MatrixFactorizations v2.2.0 [e1d29d7a] Missings v1.2.0 ⌃ [d41bc354] NLSolversBase v7.8.3 [77ba4419] NaNMath v1.1.3 [6fe1bfb0] OffsetArrays v1.17.0 ⌃ [429524aa] Optim v1.11.0 [bac558e1] OrderedCollections v1.8.1 [d96e819e] Parameters v0.12.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [27ebfcd6] Primes v0.5.7 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 ⌅ [c4ea9172] QuasiArrays v0.9.8 [308eb6b3] RationalRoots v0.2.1 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [f2b01f46] Roots v2.2.10 [efcf1570] Setfield v1.1.2 [619b3e1a] SolverTraces v0.1.3 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.5.1 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3a884ed6] UnPack v1.0.2 [1cfade01] UnicodeFun v0.4.1 [1986cc42] Unitful v1.25.0 [a7773ee8] UnitfulAtomic v1.0.0 [9f57e263] WignerSymbols v2.0.0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ERROR: LoadError: The following 2 direct dependencies failed to precompile: Optim Failed to precompile Optim [429524aa-4258-5aef-a3af-852621145aeb] to "/home/pkgeval/.julia/compiled/v1.13/Optim/jl_589Mjg" (ProcessExited(1)). ERROR: LoadError: syntax: misplaced "global" declaration Stacktrace: [1] top-level scope @ ~/.julia/packages/Optim/HvjCd/src/Optim.jl:223 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3072 [4] top-level scope @ stdin:5 [5] eval(m::Module, e::Any) @ Core ./boot.jl:489 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2918 [7] include_string @ ./loading.jl:2928 [inlined] [8] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [9] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Optim/HvjCd/src/Optim.jl:1 in expression starting at stdin:5 AtomicStructure Failed to precompile AtomicStructure [e24b7630-0518-11e9-1346-1188d3abce50] to "/home/pkgeval/.julia/compiled/v1.13/AtomicStructure/jl_BgJyXg" (ProcessExited(1)). ERROR: LoadError: syntax: misplaced "global" declaration Stacktrace: [1] top-level scope @ ~/.julia/packages/Optim/HvjCd/src/Optim.jl:223 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3072 [4] top-level scope @ stdin:5 [5] eval(m::Module, e::Any) @ Core ./boot.jl:489 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2918 [7] include_string @ ./loading.jl:2928 [inlined] [8] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [9] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Optim/HvjCd/src/Optim.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Optim [429524aa-4258-5aef-a3af-852621145aeb] to "/home/pkgeval/.julia/compiled/v1.13/Optim/jl_ZIkVsH" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, loadable_exts::Nothing) @ Base ./loading.jl:3357 [3] kwcall(::@NamedTuple{loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3237 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2698 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#234 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3928 [11] maybe_cachefile_lock @ ./loading.jl:3925 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2673 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2511 [14] macro expansion @ ./loading.jl:2439 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2403 [17] require @ ./loading.jl:2379 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/AtomicStructure/DDEEr/src/SCF/SCF.jl:10 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [23] top-level scope @ ~/.julia/packages/AtomicStructure/DDEEr/src/AtomicStructure.jl:35 [24] include(mod::Module, _path::String) @ Base ./Base.jl:309 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3072 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2918 [29] include_string @ ./loading.jl:2928 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [31] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/AtomicStructure/DDEEr/src/SCF/SCF.jl:1 in expression starting at /home/pkgeval/.julia/packages/AtomicStructure/DDEEr/src/AtomicStructure.jl:1 in expression starting at stdin:5 in expression starting at /home/pkgeval/.julia/packages/AtomicStructure/DDEEr/test/runtests.jl:1 Testing failed after 51.23s ERROR: LoadError: Package AtomicStructure errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 639.7s: package has syntax issues