Package evaluation of SIAN on Julia 1.13.0-DEV.1155 (b3f8bb4e33*) started at 2025-09-18T00:30:53.433 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.1s ################################################################################ # Installation # Installing SIAN... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [cf7bdac0] + SIAN v1.7.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.18.0 ⌅ [c3fe647b] + AbstractAlgebra v0.44.13 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.20.0 [4c555306] + ArrayLayouts v1.11.2 [a9b6321e] + Atomix v1.1.2 [e2ed5e7c] + Bijections v0.2.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.7.2 [70df07ce] + BracketingNonlinearSolve v1.4.0 [2a0fbf3d] + CPUSummary v0.2.7 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 ⌅ [861a8166] + Combinatorics v1.0.2 [a80b9123] + CommonMark v0.9.1 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [2b5f629d] + DiffEqBase v6.190.2 [459566f4] + DiffEqCallbacks v4.9.0 [77a26b50] + DiffEqNoiseProcess v5.24.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.7 [8d63f2c5] + DispatchDoctor v0.4.26 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [5b8099bc] + DomainSets v0.7.16 [7c1d4256] + DynamicPolynomials v0.6.3 [06fc5a27] + DynamicQuantities v1.10.0 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.13 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.1.3 [1a297f60] + FillArrays v1.14.0 [64ca27bc] + FindFirstFunctions v1.4.2 [6a86dc24] + FiniteDiff v2.28.1 [1fa38f19] + Format v1.3.7 [f6369f11] + ForwardDiff v1.2.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [c27321d9] + Glob v1.3.1 [86223c79] + Graphs v1.13.1 [0b43b601] + Groebner v0.9.5 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [3263718b] + ImplicitDiscreteSolve v1.2.0 [d25df0c9] + Inflate v0.1.5 [18e54dd8] + IntegerMathUtils v0.1.3 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [98e50ef6] + JuliaFormatter v2.1.6 ⌅ [70703baa] + JuliaSyntax v0.4.10 [ccbc3e58] + JumpProcesses v9.19.1 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [10f19ff3] + LayoutPointers v0.1.17 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [961ee093] + ModelingToolkit v10.22.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 ⌃ [102ac46a] + MultivariatePolynomials v0.5.9 [d8a4904e] + MutableArithmetics v1.6.5 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 ⌅ [2edaba10] + Nemo v0.49.5 [be0214bd] + NonlinearSolveBase v1.16.0 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [bbf590c4] + OrdinaryDiffEqCore v1.34.0 [90014a1f] + PDMats v0.11.35 [3e851597] + ParamPunPam v0.5.3 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.6 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [85a6dd25] + PositiveFactorizations v0.2.4 [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [27ebfcd6] + Primes v0.5.7 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.1 [fb686558] + RandomExtensions v0.4.4 [e6cf234a] + RandomNumbers v1.6.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.37.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.1.1 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [9dfe8606] + SCCNonlinearSolve v1.5.0 [cf7bdac0] + SIAN v1.7.0 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.120.0 [19f34311] + SciMLJacobianOperators v0.1.11 [c0aeaf25] + SciMLOperators v1.7.2 [431bcebd] + SciMLPublic v1.0.0 [53ae85a6] + SciMLStructures v1.7.0 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.8.0 [699a6c99] + SimpleTraits v0.9.5 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [7792a7ef] + StrideArraysCore v0.5.8 [220ca800] + StructuralIdentifiability v0.5.16 [2efcf032] + SymbolicIndexingInterface v0.3.44 [19f23fe9] + SymbolicLimits v0.2.3 [d1185830] + SymbolicUtils v3.32.0 [0c5d862f] + Symbolics v6.55.0 [ed4db957] + TaskLocalValues v0.1.3 [8ea1fca8] + TermInterface v2.0.0 [1c621080] + TestItems v1.0.0 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [410a4b4d] + Tricks v0.1.12 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.25.0 [a7c27f48] + Unityper v0.1.6 [013be700] + UnsafeAtomics v0.3.0 ⌅ [e134572f] + FLINT_jll v300.200.201+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [aacddb02] + JpegTurbo_jll v3.1.3+0 [656ef2d0] + OpenBLAS32_jll v0.3.29+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [781609d7] + GMP_jll v6.3.0+2 [3a97d323] + MPFR_jll v4.2.2+0 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 7.67s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 2358.94s ################################################################################ # Testing # Testing SIAN Status `/tmp/jl_zgH8an/Project.toml` [0b43b601] Groebner v0.9.5 [1914dd2f] MacroTools v0.5.16 [961ee093] ModelingToolkit v10.22.0 ⌅ [2edaba10] Nemo v0.49.5 [bac558e1] OrderedCollections v1.8.1 [cf7bdac0] SIAN v1.7.0 [276daf66] SpecialFunctions v2.5.1 [220ca800] StructuralIdentifiability v0.5.16 [d1185830] SymbolicUtils v3.32.0 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_zgH8an/Manifest.toml` [47edcb42] ADTypes v1.18.0 ⌅ [c3fe647b] AbstractAlgebra v0.44.13 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.20.0 [4c555306] ArrayLayouts v1.11.2 [a9b6321e] Atomix v1.1.2 [e2ed5e7c] Bijections v0.2.2 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] BlockArrays v1.7.2 [70df07ce] BracketingNonlinearSolve v1.4.0 [2a0fbf3d] CPUSummary v0.2.7 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 ⌅ [861a8166] Combinatorics v1.0.2 [a80b9123] CommonMark v0.9.1 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.0 [b152e2b5] CompositeTypes v0.1.4 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [ab62b9b5] DeepDiffs v1.2.0 [2b5f629d] DiffEqBase v6.190.2 [459566f4] DiffEqCallbacks v4.9.0 [77a26b50] DiffEqNoiseProcess v5.24.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.7 [8d63f2c5] DispatchDoctor v0.4.26 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [5b8099bc] DomainSets v0.7.16 [7c1d4256] DynamicPolynomials v0.6.3 [06fc5a27] DynamicQuantities v1.10.0 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.13 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.1.3 [1a297f60] FillArrays v1.14.0 [64ca27bc] FindFirstFunctions v1.4.2 [6a86dc24] FiniteDiff v2.28.1 [1fa38f19] Format v1.3.7 [f6369f11] ForwardDiff v1.2.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [c27321d9] Glob v1.3.1 [86223c79] Graphs v1.13.1 [0b43b601] Groebner v0.9.5 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [3263718b] ImplicitDiscreteSolve v1.2.0 [d25df0c9] Inflate v0.1.5 [18e54dd8] IntegerMathUtils v0.1.3 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [ae98c720] Jieko v0.2.1 [98e50ef6] JuliaFormatter v2.1.6 ⌅ [70703baa] JuliaSyntax v0.4.10 [ccbc3e58] JumpProcesses v9.19.1 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [10f19ff3] LayoutPointers v0.1.17 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 [961ee093] ModelingToolkit v10.22.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 ⌃ [102ac46a] MultivariatePolynomials v0.5.9 [d8a4904e] MutableArithmetics v1.6.5 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 ⌅ [2edaba10] Nemo v0.49.5 [be0214bd] NonlinearSolveBase v1.16.0 [6fe1bfb0] OffsetArrays v1.17.0 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 [bbf590c4] OrdinaryDiffEqCore v1.34.0 [90014a1f] PDMats v0.11.35 [3e851597] ParamPunPam v0.5.3 [d96e819e] Parameters v0.12.3 [e409e4f3] PoissonRandom v0.4.6 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [85a6dd25] PositiveFactorizations v0.2.4 [d236fae5] PreallocationTools v0.4.34 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [27ebfcd6] Primes v0.5.7 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [fb686558] RandomExtensions v0.4.4 [e6cf234a] RandomNumbers v1.6.0 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.37.1 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [ae5879a3] ResettableStacks v1.1.1 [79098fc4] Rmath v0.8.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.15 [9dfe8606] SCCNonlinearSolve v1.5.0 [cf7bdac0] SIAN v1.7.0 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.120.0 [19f34311] SciMLJacobianOperators v0.1.11 [c0aeaf25] SciMLOperators v1.7.2 [431bcebd] SciMLPublic v1.0.0 [53ae85a6] SciMLStructures v1.7.0 [efcf1570] Setfield v1.1.2 [727e6d20] SimpleNonlinearSolve v2.8.0 [699a6c99] SimpleTraits v0.9.5 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [4c63d2b9] StatsFuns v1.5.0 [7792a7ef] StrideArraysCore v0.5.8 [220ca800] StructuralIdentifiability v0.5.16 [2efcf032] SymbolicIndexingInterface v0.3.44 [19f23fe9] SymbolicLimits v0.2.3 [d1185830] SymbolicUtils v3.32.0 [0c5d862f] Symbolics v6.55.0 [ed4db957] TaskLocalValues v0.1.3 [8ea1fca8] TermInterface v2.0.0 [1c621080] TestItems v1.0.0 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [410a4b4d] Tricks v0.1.12 [781d530d] TruncatedStacktraces v1.4.0 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.25.0 [a7c27f48] Unityper v0.1.6 [013be700] UnsafeAtomics v0.3.0 ⌅ [e134572f] FLINT_jll v300.200.201+0 [61579ee1] Ghostscript_jll v9.55.1+0 [aacddb02] JpegTurbo_jll v3.1.3+0 [656ef2d0] OpenBLAS32_jll v0.3.29+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [3a97d323] MPFR_jll v4.2.2+0 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... [ Info: Testing started generate_weights: [ Info: Summary of the model: [ Info: State variables: [x1, x2] [ Info: Parameter: [a, b, c, d] [ Info: Inputs: [] [ Info: Outputs: [y1] [ Info: Summary of the model: [ Info: State variables: [s, i, w, r] [ Info: Parameter: [mu, bi, bw, al, g, dz, k] [ Info: Inputs: [] [ Info: Outputs: [y1, y2] [ Info: Summary of the model: [ Info: State variables: [S, In, R, aux] [ Info: Parameter: [b, g] [ Info: Inputs: [] [ Info: Outputs: [y1, y2] [ Info: Summary of the model: [ Info: State variables: [x1, x2, x3, x4, x5] [ Info: Parameter: [k2, k4, k3] [ Info: Inputs: [] [ Info: Outputs: [y1, y2, y3] [ Info: Lotka-Volterra [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [a, c, d, x1] [ Info: Not identifiable parameters: [b, x2] [ Info: Cholera [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [mu, bi, bw, al, g, dz, k, s, r, w, i] [ Info: Not identifiable parameters: [] [ Info: SIR_R₀ [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [b, g, In, aux, S] [ Info: Not identifiable parameters: [R] [ Info: Lipolysis [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [k2, k4, k3, x1, x4, x2, x3, x5] [ Info: Not identifiable parameters: [] io_tests: [ Info: Summary of the model: [ Info: State variables: [x1, x2] [ Info: Parameter: [a, b, c, d] [ Info: Inputs: [] [ Info: Outputs: [y1] [ Info: Summary of the model: [ Info: State variables: [x1] [ Info: Parameter: [a] [ Info: Inputs: [] [ Info: Outputs: [y1, y2] [ Info: Summary of the model: [ Info: State variables: [S, E, In, N] [ Info: Parameter: [b, nu, a] [ Info: Inputs: [] [ Info: Outputs: [y1, y2] [ Info: Summary of the model: [ Info: State variables: [xA, xB, xC, eA, eC] [ Info: Parameter: [k1, k2, eB] [ Info: Inputs: [] [ Info: Outputs: [y1, y2, y3, y4] [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [a, c, d, x1] [ Info: Not identifiable parameters: [b, x2] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [c, x1, d, a] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [b, x2] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [a, c, d, x1] [ Info: Not identifiable parameters: [b, x2] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [c, x1, d, a] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [b, x2] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [a, c, d, x1, x2] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [c, x1, x2, d, a] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [a, c, d, x1, x2] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [c, x1, x2, d, a] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [a, x1] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [x1] [ Info: Locally but not globally identifiable parameters: [a] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [a, x1] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [x1] [ Info: Locally but not globally identifiable parameters: [a] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [x1] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [x1] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [x1] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [x1] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [b, nu, a, E, In, N, S] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [b, In, N] [ Info: Locally but not globally identifiable parameters: [a, E, nu, S] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [b, nu, a, E, In, N, S] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [b, In, N] [ Info: Locally but not globally identifiable parameters: [a, E, nu, S] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [b, nu, E, In, N] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [b, E, In, nu, N] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [b, nu, E, In, N] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [b, E, In, nu, N] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [k1, k2, eB, xA, xC, xB, eA, eC] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [xC, eA, eC] [ Info: Locally but not globally identifiable parameters: [xA, k1, k2, xB, eB] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [k1, k2, eB, xA, xC, xB, eA, eC] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 735 running 1 of 1 signal (10): User defined signal 1 _ZNK4llvm10DataLayout22getIndexTypeSizeInBitsEPNS_4TypeE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm23ObjectSizeOffsetVisitor11computeImplEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm23ObjectSizeOffsetVisitor7computeEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13getObjectSizeEPKNS_5ValueERmRKNS_10DataLayoutEPKNS_17TargetLibraryInfoENS_14ObjectSizeOptsE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18DSEState11isOverwriteEPKN4llvm11InstructionES4_RKNS1_14MemoryLocationES7_RlS8_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18DSEState15getDomMemoryDefEPN4llvm9MemoryDefEPNS1_12MemoryAccessERKNS1_14MemoryLocationEPKNS1_5ValueERjSC_bSC_b at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_1L19eliminateDeadStoresERN4llvm8FunctionERNS0_9AAResultsERNS0_9MemorySSAERNS0_13DominatorTreeERNS0_17PostDominatorTreeERKNS0_17TargetLibraryInfoERKNS0_8LoopInfoE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm7DSEPass3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:791 operator() at /source/src/jitlayers.cpp:1513 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1474 [inlined] operator() at /source/src/jitlayers.cpp:1649 [inlined] addModule at /source/src/jitlayers.cpp:2106 jl_compile_codeinst_now at /source/src/jitlayers.cpp:682 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:876 jl_compile_method_internal at /source/src/gf.c:3644 _jl_invoke at /source/src/gf.c:4104 [inlined] ijl_apply_generic at /source/src/gf.c:4309 _groebner_guess_lucky_prime at /home/pkgeval/.julia/packages/Groebner/k40dp/src/groebner/groebner.jl:179 _groebner_learn_and_apply at /home/pkgeval/.julia/packages/Groebner/k40dp/src/groebner/groebner.jl:214 _groebner2 at /home/pkgeval/.julia/packages/Groebner/k40dp/src/groebner/groebner.jl:138 [inlined] groebner2 at /home/pkgeval/.julia/packages/Groebner/k40dp/src/groebner/groebner.jl:80 unknown function (ip: 0x720a94b19381) at (unknown file) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 __groebner1 at /home/pkgeval/.julia/packages/Groebner/k40dp/src/groebner/groebner.jl:57 unknown function (ip: 0x720aa614f48c) at (unknown file) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 _groebner1 at /home/pkgeval/.julia/packages/Groebner/k40dp/src/groebner/groebner.jl:34 unknown function (ip: 0x720aa614b000) at (unknown file) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 groebner0 at /home/pkgeval/.julia/packages/Groebner/k40dp/src/groebner/groebner.jl:10 #groebner#172 at /home/pkgeval/.julia/packages/Groebner/k40dp/src/interface.jl:111 [inlined] groebner at /home/pkgeval/.julia/packages/Groebner/k40dp/src/interface.jl:109 unknown function (ip: 0x720aa613d002) at (unknown file) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 #identifiability_ode#64 at /home/pkgeval/.julia/packages/SIAN/6RU2P/src/SIAN.jl:267 identifiability_ode at /home/pkgeval/.julia/packages/SIAN/6RU2P/src/SIAN.jl:47 unknown function (ip: 0x720aa612dfa9) at (unknown file) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 macro expansion at /home/pkgeval/.julia/packages/SIAN/6RU2P/test/io_tests.jl:110 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1952 [inlined] top-level scope at /home/pkgeval/.julia/packages/SIAN/6RU2P/test/io_tests.jl:2 _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_invoke at /source/src/gf.c:4119 jl_toplevel_eval_flex at /source/src/toplevel.c:761 jl_toplevel_eval_flex at /source/src/toplevel.c:712 ijl_toplevel_eval at /source/src/toplevel.c:784 ijl_toplevel_eval_in at /source/src/toplevel.c:829 eval at ./boot.jl:489 include_string at ./loading.jl:2915 _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 _include at ./loading.jl:2975 include at ./Base.jl:308 unknown function (ip: 0x720ade134676) at (unknown file) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:772 jl_toplevel_eval_flex at /source/src/toplevel.c:712 ijl_toplevel_eval at /source/src/toplevel.c:784 ijl_toplevel_eval_in at /source/src/toplevel.c:829 eval at ./boot.jl:489 include_string at ./loading.jl:2915 _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 _include at ./loading.jl:2975 include at ./Base.jl:309 IncludeInto at ./Base.jl:310 jfptr_IncludeInto_57963.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:772 jl_toplevel_eval_flex at /source/src/toplevel.c:712 ijl_toplevel_eval at /source/src/toplevel.c:784 ijl_toplevel_eval_in at /source/src/toplevel.c:829 eval at ./boot.jl:489 exec_options at ./client.jl:296 _start at ./client.jl:563 jfptr__start_38327.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x720af811f249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== [ Info: Remainder computation [ Info: === Summary === ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1200 wait_forever at ./task.jl:1137 jfptr_wait_forever_74138.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000073f51a22f490 Total snapshots: 421. Utilization: 0% ╎421 @Base/task.jl:1137 wait_forever() 420╎ 421 @Base/task.jl:1200 wait() [ Info: Globally identifiable parameters: [xC, eA, eC] [ Info: Locally but not globally identifiable parameters: [xA, k1, k2, xB, eB] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [k2, xA, xC, xB, eA, eC] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [xA, xC, k2, xB, eA, eC] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [] [ Info: =============== [ Info: Solving the problem [ Info: Constructing the maximal system [ Info: Truncating [ Info: Assessing local identifiability [ Info: Locally identifiable parameters: [k2, xA, xC, xB, eA, eC] [ Info: Not identifiable parameters: [] [ Info: Randomizing [ Info: GB computation [ Info: Remainder computation [ Info: === Summary === [ Info: Globally identifiable parameters: [xA, xC, k2, xB, eA, eC] [ Info: Locally but not globally identifiable parameters: [] [ Info: Not identifiable parameters: [] [ Info: =============== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 mtk_compatOverhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000720ade1fc010 Total snapshots: 1. Utilization: 100% ╎1 @Base/client.jl:563 _start() ╎ 1 @Base/client.jl:296 exec_options(opts::Base.JLOptions) ╎ 1 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ 1 @Base/Base.jl:310 (::Base.IncludeInto)(fname::String) ╎ 1 @Base/Base.jl:309 include(mapexpr::Function, mod::Module, _path::Strin… ╎ 1 @Base/loading.jl:2975 _include(mapexpr::Function, mod::Module, _path:… ╎ ╎ 1 @Base/loading.jl:2915 include_string(mapexpr::typeof(identity), mod:… ╎ ╎ 1 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 1 @Base/Base.jl:308 include(mod::Module, _path::String) ╎ ╎ 1 @Base/loading.jl:2975 _include(mapexpr::Function, mod::Module, _p… ╎ ╎ 1 @Base/loading.jl:2915 include_string(mapexpr::typeof(identity), … ╎ ╎ ╎ 1 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ ╎ 1 @SIAN/…st/io_tests.jl:2 top-level scope ╎ ╎ ╎ 1 @Test/src/Test.jl:1952 macro expansion ╎ ╎ ╎ 1 @SIAN/…/io_tests.jl:110 macro expansion ╎ ╎ ╎ 1 @SIAN/src/SIAN.jl:47 kwcall(::@NamedTuple{weighted_ordering… ╎ ╎ ╎ ╎ 1 @SIAN/src/SIAN.jl:267 identifiability_ode(ode::ODE{QQMPoly… ╎ ╎ ╎ ╎ 1 @Groebner/…face.jl:109 groebner(polynomials::Vector{QQMPo… ╎ ╎ ╎ ╎ 1 @Groebner/…face.jl:111 #groebner#172 ╎ ╎ ╎ ╎ 1 @Groebner/…bner.jl:10 groebner0(polynomials::Vector{QQM… ╎ ╎ ╎ ╎ 1 @Groebner/…ner.jl:34 _groebner1(ring::Groebner.PolyRin… ╎ ╎ ╎ ╎ ╎ 1 @Groebner/…ner.jl:57 __groebner1(ring::Groebner.PolyR… ╎ ╎ ╎ ╎ ╎ 1 @Groebner/…er.jl:80 groebner2(ring::Groebner.PolyRin… ╎ ╎ ╎ ╎ ╎ 1 @Groebner/…er.jl:138 _groebner2 ╎ ╎ ╎ ╎ ╎ 1 @Groebner/…r.jl:214 _groebner_learn_and_apply(ring… ╎ ╎ ╎ ╎ ╎ 1 @Groebner/…r.jl:179 _groebner_guess_lucky_prime(s… : [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1200 wait_forever at ./task.jl:1137 jfptr_wait_forever_74138.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 27557794 (Pool: 27557133; Big: 661); GC: 25 [735] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/SIAN/6RU2P/test/mtk_compat.jl:1 _ZN4llvm15InstCombinePassC1ENS_18InstCombineOptionsE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) buildEarlySimplificationPipeline at /source/src/pipeline.cpp:371 buildPipeline at /source/src/pipeline.cpp:626 createMPM at /source/src/pipeline.cpp:740 [inlined] run at /source/src/pipeline.cpp:789 operator() at /source/src/jitlayers.cpp:1513 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1474 [inlined] operator() at /source/src/jitlayers.cpp:1649 [inlined] addModule at /source/src/jitlayers.cpp:2106 jl_compile_codeinst_now at /source/src/jitlayers.cpp:682 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:876 jl_compile_method_internal at /source/src/gf.c:3644 _jl_invoke at /source/src/gf.c:4104 [inlined] ijl_apply_generic at /source/src/gf.c:4309 _parse_vars at /home/pkgeval/.julia/packages/Symbolics/lJiB2/src/variable.jl:156 _parse_vars at /home/pkgeval/.julia/packages/Symbolics/lJiB2/src/variable.jl:107 unknown function (ip: 0x720a949c233d) at (unknown file) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 @variables at /home/pkgeval/.julia/packages/Symbolics/lJiB2/src/variable.jl:538 _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_invoke at /source/src/gf.c:4119 jl_invoke_julia_macro at /source/src/ast.c:1042 jl_expand_macros at /source/src/ast.c:1104 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1116 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1116 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1153 jl_expand_macros at /source/src/ast.c:1116 jl_fl_lower at /source/src/ast.c:1182 fl_lower at ./flfrontend.jl:24 jfptr_fl_lower_69326.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] ijl_lower at /source/src/ast.c:1246 jl_toplevel_eval_flex at /source/src/toplevel.c:709 ijl_toplevel_eval at /source/src/toplevel.c:784 ijl_toplevel_eval_in at /source/src/toplevel.c:829 eval at ./boot.jl:489 include_string at ./loading.jl:2915 _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 _include at ./loading.jl:2975 include at ./Base.jl:308 unknown function (ip: 0x720ade134676) at (unknown file) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:772 jl_toplevel_eval_flex at /source/src/toplevel.c:712 ijl_toplevel_eval at /source/src/toplevel.c:784 ijl_toplevel_eval_in at /source/src/toplevel.c:829 eval at ./boot.jl:489 include_string at ./loading.jl:2915 _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 _include at ./loading.jl:2975 include at ./Base.jl:309 IncludeInto at ./Base.jl:310 jfptr_IncludeInto_57963.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:772 jl_toplevel_eval_flex at /source/src/toplevel.c:712 ijl_toplevel_eval at /source/src/toplevel.c:784 ijl_toplevel_eval_in at /source/src/toplevel.c:829 eval at ./boot.jl:489 exec_options at ./client.jl:296 _start at ./client.jl:563 jfptr__start_38327.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x720af811f249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 96668475 (Pool: 96667396; Big: 1079); GC: 33 PkgEval terminated after 2722.6s: test duration exceeded the time limit