Package evaluation of RegressionDynamicCausalModeling on Julia 1.13.0-DEV.1155 (b3f8bb4e33*) started at 2025-09-17T22:24:28.746 ################################################################################ # Set-up # Set-up completed after 0.23s ################################################################################ # Installation # Installing RegressionDynamicCausalModeling... Resolving package versions... Installed Rmath_jll ─────────────────────── v0.5.1+0 Installed libaec_jll ────────────────────── v1.1.4+0 Installed MKL_jll ───────────────────────── v2025.2.0+0 Installed oneTBB_jll ────────────────────── v2022.0.0+0 Installed MPICH_jll ─────────────────────── v4.3.1+0 Installed FillArrays ────────────────────── v1.14.0 Installed HypergeometricFunctions ───────── v0.3.28 Installed DataStructures ────────────────── v0.19.1 Installed MicrosoftMPI_jll ──────────────── v10.1.4+3 Installed CodecZlib ─────────────────────── v0.7.8 Installed OrderedCollections ────────────── v1.8.1 Installed Compat ────────────────────────── v4.18.0 Installed AliasTables ───────────────────── v1.1.3 Installed RegressionDynamicCausalModeling ─ v0.1.4 Installed StatsBase ─────────────────────── v0.34.6 Installed TranscodingStreams ────────────── v0.11.3 Installed DataAPI ───────────────────────── v1.16.0 Installed IntelOpenMP_jll ───────────────── v2025.2.0+0 Installed StatsAPI ──────────────────────── v1.7.1 Installed IrrationalConstants ───────────── v0.2.4 Installed Statistics ────────────────────── v1.11.1 Installed ProgressMeter ─────────────────── v1.11.0 Installed AbstractFFTs ──────────────────── v1.5.0 Installed Xorg_libpciaccess_jll ─────────── v0.18.1+0 Installed PrecompileTools ───────────────── v1.3.3 Installed OpenSpecFun_jll ───────────────── v0.5.6+0 Installed Requires ──────────────────────── v1.3.1 Installed LogExpFunctions ───────────────── v0.3.29 Installed QuadGK ────────────────────────── v2.11.2 Installed BufferedStreams ───────────────── v1.2.2 Installed OpenMPI_jll ───────────────────── v5.0.8+0 Installed HDF5_jll ──────────────────────── v1.14.6+0 Installed Hwloc_jll ─────────────────────── v2.12.2+0 Installed Rmath ─────────────────────────── v0.8.0 Installed StatsFuns ─────────────────────── v1.5.0 Installed PtrArrays ─────────────────────── v1.3.0 Installed Distributions ─────────────────── v0.25.120 Installed XML2_jll ──────────────────────── v2.13.8+0 Installed Reexport ──────────────────────── v1.2.2 Installed Scratch ───────────────────────── v1.3.0 Installed Missings ──────────────────────── v1.2.0 Installed Preferences ───────────────────── v1.5.0 Installed SpecialFunctions ──────────────── v2.5.1 Installed FFTW ──────────────────────────── v1.10.0 Installed FFTW_jll ──────────────────────── v3.3.11+0 Installed JLLWrappers ───────────────────── v1.7.1 Installed Libiconv_jll ──────────────────── v1.18.0+0 Installed PDMats ────────────────────────── v0.11.35 Installed MPIPreferences ────────────────── v0.1.11 Installed MPItrampoline_jll ─────────────── v5.5.4+0 Installed SortingAlgorithms ─────────────── v1.2.2 Installed DocStringExtensions ───────────── v0.9.5 Installed MAT ───────────────────────────── v0.10.7 Installed HDF5 ──────────────────────────── v0.17.2 Installing 12 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact libaec 49.6 KiB Installed artifact Rmath 121.9 KiB Installed artifact XML2 2.5 MiB Installed artifact oneTBB 435.6 KiB Installed artifact FFTW 2.2 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact rDCMdata 2.2 MiB Installed artifact MPICH 3.3 MiB Installed artifact HDF5 5.7 MiB Installed artifact Hwloc 3.5 MiB Updating `~/.julia/environments/v1.13/Project.toml` [4fb452e6] + RegressionDynamicCausalModeling v0.1.4 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [66dad0bd] + AliasTables v1.1.3 [e1450e63] + BufferedStreams v1.2.2 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [7a1cc6ca] + FFTW v1.10.0 [1a297f60] + FillArrays v1.14.0 [f67ccb44] + HDF5 v0.17.2 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [4fb452e6] + RegressionDynamicCausalModeling v0.1.4 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [6c6a2e73] + Scratch v1.3.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [3bb67fe8] + TranscodingStreams v0.11.3 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.8+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.2+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.67.0+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building RegressionDynamicCausalModeling → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/cfcaa1acb988d8e175767e4665e32042b1998f2d/build.log` Installation completed after 27.39s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 983.9 ms ✓ Reexport 1181.4 ms ✓ Statistics 890.4 ms ✓ DataAPI 2266.4 ms ✓ IrrationalConstants 850.6 ms ✓ StatsAPI 1227.7 ms ✓ Requires 1319.1 ms ✓ OrderedCollections 1150.8 ms ✓ DocStringExtensions 1044.6 ms ✓ AbstractFFTs 2253.1 ms ✓ FillArrays 1065.3 ms ✓ BufferedStreams 858.1 ms ✓ PtrArrays 1387.1 ms ✓ TranscodingStreams 1283.6 ms ✓ SuiteSparse 1960.7 ms ✓ ProgressMeter 983.0 ms ✓ Scratch 1239.7 ms ✓ Compat 1185.7 ms ✓ Preferences 1414.8 ms ✓ Statistics → SparseArraysExt 1049.5 ms ✓ Missings 3759.6 ms ✓ DataStructures 1517.5 ms ✓ LogExpFunctions 1669.4 ms ✓ FillArrays → FillArraysSparseArraysExt 1477.9 ms ✓ FillArrays → FillArraysStatisticsExt 1239.5 ms ✓ AliasTables 1320.7 ms ✓ CodecZlib 2368.3 ms ✓ PDMats 906.9 ms ✓ Compat → CompatLinearAlgebraExt 1323.8 ms ✓ JLLWrappers 1653.3 ms ✓ MPIPreferences 1051.3 ms ✓ PrecompileTools 1132.9 ms ✓ SortingAlgorithms 2385.1 ms ✓ QuadGK 1521.4 ms ✓ FillArrays → FillArraysPDMatsExt 1542.9 ms ✓ libaec_jll 5481.1 ms ✓ IntelOpenMP_jll 1545.6 ms ✓ Xorg_libpciaccess_jll 1652.5 ms ✓ Libiconv_jll 1507.3 ms ✓ oneTBB_jll 1518.1 ms ✓ FFTW_jll 1512.7 ms ✓ Rmath_jll 1229.7 ms ✓ MicrosoftMPI_jll 1435.5 ms ✓ OpenSpecFun_jll 5661.6 ms ✓ MPItrampoline_jll 5042.5 ms ✓ StatsBase 1628.0 ms ✓ XML2_jll 11226.4 ms ✓ MKL_jll 1618.3 ms ✓ Rmath 5371.4 ms ✓ SpecialFunctions 1501.5 ms ✓ Hwloc_jll 6916.9 ms ✓ FFTW 2631.4 ms ✓ HypergeometricFunctions 5428.7 ms ✓ MPICH_jll 5629.7 ms ✓ OpenMPI_jll 3270.6 ms ✓ StatsFuns 6230.6 ms ✓ HDF5_jll 11320.6 ms ✓ Distributions 16284.7 ms ✓ HDF5 9384.1 ms ✓ MAT ✗ RegressionDynamicCausalModeling 59 dependencies successfully precompiled in 178 seconds. 34 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP └ ERROR: LoadError: The following 1 direct dependency failed to precompile: RegressionDynamicCausalModeling Failed to precompile RegressionDynamicCausalModeling [4fb452e6-e726-4794-90dc-adda47b23488] to "/home/pkgeval/.julia/compiled/v1.13/RegressionDynamicCausalModeling/jl_XCmj7Z" (ProcessExited(1)). ERROR: LoadError: TypeError: in ccall function name, expected Symbol, got a value of type Expr Stacktrace: [1] top-level scope @ ~/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/utils/dcm_euler_integration.jl:132 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [3] top-level scope @ ~/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/RegressionDynamicCausalModeling.jl:52 [4] include(mod::Module, _path::String) @ Base ./Base.jl:308 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3069 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2915 [9] include_string @ ./loading.jl:2925 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [11] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/utils/dcm_euler_integration.jl:132 in expression starting at /home/pkgeval/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/RegressionDynamicCausalModeling.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 185.39s ################################################################################ # Loading # Loading RegressionDynamicCausalModeling... Precompiling packages... Info Given RegressionDynamicCausalModeling was explicitly requested, output will be shown live  ERROR: LoadError: TypeError: in ccall function name, expected Symbol, got a value of type Expr Stacktrace:  [1] top-level scope  @ ~/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/utils/dcm_euler_integration.jl:132  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:309  [3] top-level scope  @ ~/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/RegressionDynamicCausalModeling.jl:52  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:308  [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3069  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2915  [9] include_string  @ ./loading.jl:2925 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:328  [11] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/utils/dcm_euler_integration.jl:132 in expression starting at /home/pkgeval/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/RegressionDynamicCausalModeling.jl:1 in expression starting at stdin:5 ✗ RegressionDynamicCausalModeling 0 dependencies successfully precompiled in 13 seconds. 93 already precompiled. ERROR: The following 1 direct dependency failed to precompile: RegressionDynamicCausalModeling Failed to precompile RegressionDynamicCausalModeling [4fb452e6-e726-4794-90dc-adda47b23488] to "/home/pkgeval/.julia/compiled/v1.13/RegressionDynamicCausalModeling/jl_r1yIRW" (ProcessExited(1)). ERROR: LoadError: TypeError: in ccall function name, expected Symbol, got a value of type Expr Stacktrace: [1] top-level scope @ ~/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/utils/dcm_euler_integration.jl:132 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [3] top-level scope @ ~/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/RegressionDynamicCausalModeling.jl:52 [4] include(mod::Module, _path::String) @ Base ./Base.jl:308 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3069 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2915 [9] include_string @ ./loading.jl:2925 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [11] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/utils/dcm_euler_integration.jl:132 in expression starting at /home/pkgeval/.julia/packages/RegressionDynamicCausalModeling/EgHu2/src/RegressionDynamicCausalModeling.jl:1 in expression starting at stdin: Loading failed after 15.05s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using RegressionDynamicCausalModeling'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:308 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:330 [7] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 254.5s: package fails to precompile