Package evaluation of PointSpreadFunctions on Julia 1.13.0-DEV.464 (abc56fde89*) started at 2025-05-01T20:41:10.443


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
┌ Warning: could not download https://pkg.julialang.org/registries
│   exception = RequestError: HTTP/2 301 (Connection timed out after 30005 milliseconds) while requesting https://pkg.julialang.org/registries
└ @ Pkg.Registry /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Registry/Registry.jl:77

Set-up completed after 7.57s


################################################################################
# Installation
#

Installing PointSpreadFunctions...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [e8810a93] + PointSpreadFunctions v0.4.3
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [621f4979] + AbstractFFTs v1.5.0
  [7f219486] + AbstractNFFTs v0.8.2
  [7d9f7c33] + Accessors v0.1.42
  [dce04be8] + ArgCheck v2.5.0
  [198e06fe] + BangBang v0.4.4
  [9718e550] + Baselet v0.1.1
  [26cce99e] + BasicInterpolators v0.7.1
  [d360d2e6] + ChainRulesCore v1.25.1
  [34da2185] + Compat v4.16.0
  [a33af91c] + CompositionsBase v0.1.2
  [187b0558] + ConstructionBase v1.5.8
  [6add18c4] + ContextVariablesX v0.1.3
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [244e2a9f] + DefineSingletons v0.1.2
  [ffbed154] + DocStringExtensions v0.9.4
  [7a1cc6ca] + FFTW v1.8.1
  [cc61a311] + FLoops v0.2.2
  [b9860ae5] + FLoopsBase v0.1.1
  [b18b359b] + FourierTools v0.4.8
  [613c443e] + IndexFunArrays v0.2.7
  [22cec73e] + InitialValues v0.3.1
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [b14d175d] + JuliaVariables v0.2.4
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [d8e11817] + MLStyle v0.4.17
  [1914dd2f] + MacroTools v0.5.16
  [c03570c3] + Memoize v0.4.4
  [128add7d] + MicroCollections v0.2.0
⌅ [98581153] + NDTools v0.7.1
  [efe261a4] + NFFT v0.13.7
  [71a1bf82] + NameResolution v0.1.5
  [6fe1bfb0] + OffsetArrays v1.17.0
  [bac558e1] + OrderedCollections v1.8.0
  [5432bcbf] + PaddedViews v0.5.12
  [e8810a93] + PointSpreadFunctions v0.4.3
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.4.3
  [8162dcfd] + PrettyPrint v0.2.0
  [1fd47b50] + QuadGK v2.11.2
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [efcf1570] + Setfield v1.1.2
  [1277b4bf] + ShiftedArrays v2.0.0
  [276daf66] + SpecialFunctions v2.5.1
  [171d559e] + SplittablesBase v0.1.15
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [28d57a85] + Transducers v0.4.84
  [e462d300] + ZernikePolynomials v1.0.0
  [f5851436] + FFTW_jll v3.3.11+0
  [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0
  [856f044c] + MKL_jll v2025.0.1+1
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [1317d2d5] + oneTBB_jll v2022.0.0+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.12.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.12.1+1
  [e37daf67] + LibGit2_jll v1.9.0+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2024.12.31
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.5+0
  [458c3c95] + OpenSSL_jll v3.0.16+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.12.0+0
  [8e850ede] + nghttp2_jll v1.65.0+0
  [3f19e933] + p7zip_jll v17.5.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 4.18s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 22.12s


################################################################################
# Testing
#

     Testing PointSpreadFunctions
      Status `/tmp/jl_6WCd0d/Project.toml`
  [7a1cc6ca] FFTW v1.8.1
  [b18b359b] FourierTools v0.4.8
  [613c443e] IndexFunArrays v0.2.7
⌅ [98581153] NDTools v0.7.1
  [e8810a93] PointSpreadFunctions v0.4.3
  [1fd47b50] QuadGK v2.11.2
  [276daf66] SpecialFunctions v2.5.1
  [e462d300] ZernikePolynomials v1.0.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_6WCd0d/Manifest.toml`
  [621f4979] AbstractFFTs v1.5.0
  [7f219486] AbstractNFFTs v0.8.2
  [7d9f7c33] Accessors v0.1.42
  [dce04be8] ArgCheck v2.5.0
  [198e06fe] BangBang v0.4.4
  [9718e550] Baselet v0.1.1
  [26cce99e] BasicInterpolators v0.7.1
  [d360d2e6] ChainRulesCore v1.25.1
  [34da2185] Compat v4.16.0
  [a33af91c] CompositionsBase v0.1.2
  [187b0558] ConstructionBase v1.5.8
  [6add18c4] ContextVariablesX v0.1.3
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [244e2a9f] DefineSingletons v0.1.2
  [ffbed154] DocStringExtensions v0.9.4
  [7a1cc6ca] FFTW v1.8.1
  [cc61a311] FLoops v0.2.2
  [b9860ae5] FLoopsBase v0.1.1
  [b18b359b] FourierTools v0.4.8
  [613c443e] IndexFunArrays v0.2.7
  [22cec73e] InitialValues v0.3.1
  [3587e190] InverseFunctions v0.1.17
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [b14d175d] JuliaVariables v0.2.4
  [2ab3a3ac] LogExpFunctions v0.3.29
  [d8e11817] MLStyle v0.4.17
  [1914dd2f] MacroTools v0.5.16
  [c03570c3] Memoize v0.4.4
  [128add7d] MicroCollections v0.2.0
⌅ [98581153] NDTools v0.7.1
  [efe261a4] NFFT v0.13.7
  [71a1bf82] NameResolution v0.1.5
  [6fe1bfb0] OffsetArrays v1.17.0
  [bac558e1] OrderedCollections v1.8.0
  [5432bcbf] PaddedViews v0.5.12
  [e8810a93] PointSpreadFunctions v0.4.3
  [aea7be01] PrecompileTools v1.3.2
  [21216c6a] Preferences v1.4.3
  [8162dcfd] PrettyPrint v0.2.0
  [1fd47b50] QuadGK v2.11.2
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [efcf1570] Setfield v1.1.2
  [1277b4bf] ShiftedArrays v2.0.0
  [276daf66] SpecialFunctions v2.5.1
  [171d559e] SplittablesBase v0.1.15
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [28d57a85] Transducers v0.4.84
  [e462d300] ZernikePolynomials v1.0.0
  [f5851436] FFTW_jll v3.3.11+0
  [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0
  [856f044c] MKL_jll v2025.0.1+1
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [1317d2d5] oneTBB_jll v2022.0.0+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.12.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.12.1+1
  [e37daf67] LibGit2_jll v1.9.0+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2024.12.31
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.5+0
  [458c3c95] OpenSSL_jll v3.0.16+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.12.0+0
  [8e850ede] nghttp2_jll v1.65.0+0
  [3f19e933] p7zip_jll v17.5.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
 10.514217 seconds (8.43 M allocations: 511.950 MiB, 1.98% gc time, 95.86% compilation time)
 15.168486 seconds (7.19 M allocations: 1.086 GiB, 7.63% gc time, 64.65% compilation time)
  1.374927 seconds (910.37 k allocations: 113.695 MiB, 6.00% gc time, 77.39% compilation time)
  5.690975 seconds (3.97 M allocations: 404.381 MiB, 1.47% gc time, 86.90% compilation time)
 27.015178 seconds (15.17 M allocations: 2.136 GiB, 5.00% gc time, 82.09% compilation time)
  5.129365 seconds (51.01 k allocations: 1.033 GiB, 1.89% gc time, 2.26% compilation time)
 13.647628 seconds (6.06 M allocations: 665.627 MiB, 4.98% gc time, 56.19% compilation time)
  0.553138 seconds (238.49 k allocations: 77.638 MiB, 2.77% gc time, 63.09% compilation time)
  4.574421 seconds (311.97 k allocations: 745.555 MiB, 13.03% gc time, 6.70% compilation time)
  0.136971 seconds (172 allocations: 64.944 MiB)
  0.611026 seconds (8.15 k allocations: 192.626 MiB, 7.12% gc time)
  3.871193 seconds (49.93 k allocations: 1.342 GiB, 14.57% gc time)
  4.953759 seconds (3.32 k allocations: 1.030 GiB, 1.91% gc time)
  6.387612 seconds (60.88 k allocations: 342.831 MiB, 8.59% gc time, 0.70% compilation time)
  5.974964 seconds (4.72 M allocations: 450.972 MiB, 1.26% gc time, 89.56% compilation time)
  7.242815 seconds (481 allocations: 1.215 GiB, 7.35% gc time)
  0.639404 seconds (323 allocations: 196.398 MiB, 18.35% gc time)
  2.611592 seconds (8.30 k allocations: 578.237 MiB, 35.94% gc time)
 10.668311 seconds (50.54 k allocations: 4.046 GiB, 9.75% gc time)
 15.263767 seconds (3.48 k allocations: 3.115 GiB, 3.81% gc time)
 10.401722 seconds (2.93 M allocations: 1.085 GiB, 8.48% gc time, 26.54% compilation time)
  5.429820 seconds (3.09 M allocations: 362.173 MiB, 0.91% gc time, 89.18% compilation time)
  7.175395 seconds (481 allocations: 1.209 GiB, 7.53% gc time)
  1.077522 seconds (323 allocations: 195.019 MiB, 53.83% gc time)
  1.580857 seconds (8.30 k allocations: 575.511 MiB, 0.57% gc time)
 10.577522 seconds (50.54 k allocations: 4.010 GiB, 9.49% gc time)
 14.333013 seconds (3.48 k allocations: 3.094 GiB, 1.26% gc time)
  8.285396 seconds (1.16 M allocations: 659.396 MiB, 10.48% gc time, 15.21% compilation time)
  0.750820 seconds (111.16 k allocations: 200.771 MiB, 1.47% gc time, 22.42% compilation time)
  7.046519 seconds (481 allocations: 1.209 GiB, 8.62% gc time)
  0.621318 seconds (323 allocations: 195.023 MiB, 18.35% gc time)
  1.943607 seconds (8.30 k allocations: 575.514 MiB, 22.69% gc time)
 10.256033 seconds (50.54 k allocations: 4.010 GiB, 10.46% gc time)
 14.653445 seconds (3.48 k allocations: 3.094 GiB, 1.49% gc time)
  8.064432 seconds (824.60 k allocations: 641.019 MiB, 11.30% gc time, 11.12% compilation time)
  8.045433 seconds (4.87 M allocations: 459.294 MiB, 1.15% gc time, 92.65% compilation time)
 12.907213 seconds (2.59 M allocations: 2.088 GiB, 5.38% gc time, 34.79% compilation time)
  3.173560 seconds (1.53 M allocations: 471.348 MiB, 24.21% gc time, 52.18% compilation time)
  4.333680 seconds (1.77 M allocations: 1.120 GiB, 2.77% gc time, 57.85% compilation time)
 11.480343 seconds (400.89 k allocations: 4.430 GiB, 10.04% gc time, 3.61% compilation time)
 13.236912 seconds (3.48 k allocations: 3.121 GiB, 2.44% gc time)
  1.565614 seconds (755.79 k allocations: 219.389 MiB, 51.31% gc time, 19.95% compilation time)
  6.231197 seconds (2.53 M allocations: 2.009 GiB, 4.21% gc time)
  1.082105 seconds (573.76 k allocations: 402.214 MiB, 37.49% gc time)
  2.289250 seconds (1.14 M allocations: 1.052 GiB, 21.20% gc time)
  9.178424 seconds (15.55 M allocations: 4.761 GiB, 9.98% gc time)
 13.950839 seconds (9.18 M allocations: 3.328 GiB, 1.89% gc time)
  1.312623 seconds (168.73 k allocations: 205.509 MiB, 59.36% gc time, 11.83% compilation time)
  5.805619 seconds (481 allocations: 1.951 GiB, 5.05% gc time)
  1.052033 seconds (323 allocations: 388.964 MiB, 40.67% gc time)
  1.661258 seconds (8.30 k allocations: 1.027 GiB, 25.23% gc time)
  7.490004 seconds (50.86 k allocations: 4.412 GiB, 10.56% gc time)
 12.904880 seconds (3.48 k allocations: 3.121 GiB, 1.70% gc time)
  1.262065 seconds (145.07 k allocations: 204.301 MiB, 59.80% gc time, 11.19% compilation time)
  5.680571 seconds (481 allocations: 1.951 GiB, 5.50% gc time)
  1.036819 seconds (323 allocations: 388.964 MiB, 40.70% gc time)
  1.660018 seconds (8.30 k allocations: 1.027 GiB, 24.26% gc time)
  7.392667 seconds (50.86 k allocations: 4.412 GiB, 11.27% gc time)
 14.585188 seconds (3.48 k allocations: 3.121 GiB, 1.90% gc time)
Test Summary:         | Pass  Total     Time
Compare various aPSFs |   46     46  6m56.7s
Test Summary:   | Pass  Total  Time
vectorial pupil |    9      9  0.2s
 34.724615 seconds (34.24 M allocations: 2.032 GiB, 3.66% gc time, 96.03% compilation time)
  1.500406 seconds (24.21 k allocations: 276.558 MiB, 2.55% gc time)
 14.184961 seconds (78.39 k allocations: 1.965 GiB, 5.12% gc time, 0.76% compilation time)
Test Summary: | Pass  Total     Time
confocal PSF  |    4      4  1m01.8s
Test Summary:  | Pass  Total  Time
lightsheet PSF |    6      6  3.4s
  5.469044 seconds (2.46 M allocations: 1.345 GiB, 11.50% gc time, 42.04% compilation time)
  1.892699 seconds (24.21 k allocations: 276.557 MiB, 27.56% gc time)
Test Summary: | Pass  Total  Time
ISM PSF       |    1      1  7.4s
  3.151547 seconds (215.93 k allocations: 406.148 MiB, 0.63% gc time, 26.68% compilation time)
  2.370635 seconds (15.71 k allocations: 387.567 MiB, 2.35% gc time)
Test Summary:  | Pass  Total  Time
Two-Photon PSF |    1      1  5.6s
 14.372892 seconds (668.25 k allocations: 1.355 GiB, 4.74% gc time, 6.97% compilation time)
Test Summary: | Pass  Total   Time
4Pi PSF       |    1      1  14.8s
Test Summary: | Pass  Total  Time
2D vs. 3D     |    7      7  3.7s
     Testing PointSpreadFunctions tests passed 

Testing completed after 529.11s

PkgEval succeeded after 697.84s