Package evaluation of T8code on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T10:10:57.696 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.26s ################################################################################ # Installation # Installing T8code... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [d0cc0030] + T8code v0.7.4 Updating `~/.julia/environments/v1.11/Manifest.toml` [fa961155] + CEnum v0.5.0 [ffbed154] + DocStringExtensions v0.9.4 [692b3bcd] + JLLWrappers v1.7.0 [da04e1cc] + MPI v0.20.22 [3da0fdf6] + MPIPreferences v0.1.11 [eebad327] + PkgVersion v0.3.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [d0cc0030] + T8code v0.7.4 [e33a78d0] + Hwloc_jll v2.12.0+0 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+2 [4ee9bed8] + t8code_jll v3.0.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [83775a58] + Zlib_jll v1.2.13+1 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.08s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 31.66s ################################################################################ # Testing # Testing T8code Status `/tmp/jl_8OpGEz/Project.toml` [4c88cf16] Aqua v0.8.11 [da04e1cc] MPI v0.20.22 [3da0fdf6] MPIPreferences v0.1.11 [d0cc0030] T8code v0.7.4 [8dfed614] Test v1.11.0 Status `/tmp/jl_8OpGEz/Manifest.toml` [4c88cf16] Aqua v0.8.11 [fa961155] CEnum v0.5.0 [34da2185] Compat v4.16.0 [ffbed154] DocStringExtensions v0.9.4 [692b3bcd] JLLWrappers v1.7.0 [da04e1cc] MPI v0.20.22 [3da0fdf6] MPIPreferences v0.1.11 [eebad327] PkgVersion v0.3.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [d0cc0030] T8code v0.7.4 [e33a78d0] Hwloc_jll v2.12.0+0 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+2 [4ee9bed8] t8code_jll v3.0.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [83775a58] Zlib_jll v1.2.13+1 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Info: Testing T8code.jl with │ MPIPreferences.binary = "MPICH_jll" └ MPIPreferences.abi = "MPICH" [ Info: Starting parallel tests ERROR: ERROR: LoadError: LoadError: ArgumentError: Package MPI [da04e1cc-30fd-572f-bb4f-1f8673147195] is required but does not seem to be installed: - Run `Pkg.instantiate()` to install all recorded dependencies. ArgumentError: Package MPI [da04e1cc-30fd-572f-bb4f-1f8673147195] is required but does not seem to be installed: - Run `Pkg.instantiate()` to install all recorded dependencies. Stacktrace: Stacktrace: [1] [1] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2515 [2] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [3] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [4] invoke_in_world @ ./essentials.jl:1086 [inlined] [5] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [6] macro expansion @ ./loading.jl:2314 [inlined] [7] macro expansion @ ./lock.jl:273 [inlined] [8] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [9] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [10] invoke_in_world @ ./essentials.jl:1086 [inlined] [11] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 in expression starting at /home/pkgeval/.julia/packages/T8code/KebPI/test/test_all.jl:1 _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2515 [2] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [3] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [4] invoke_in_world @ ./essentials.jl:1086 [inlined] [5] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [6] macro expansion @ ./loading.jl:2314 [inlined] [7] macro expansion @ ./lock.jl:273 [inlined] [8] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [9] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [10] invoke_in_world @ ./essentials.jl:1086 [inlined] [11] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 in expression starting at /home/pkgeval/.julia/packages/T8code/KebPI/test/test_all.jl:1 MPI: Error During Test at /home/pkgeval/.julia/packages/T8code/KebPI/test/runtests.jl:12 Got exception outside of a @test failed process: Process(setenv(`/home/pkgeval/.julia/artifacts/05d8c79b270470018e9de8dd24ddb6d7954aff9d/bin/mpiexec -n 2 /opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes --pkgimages=existing -g1 --startup-file=no --threads=1 --check-bounds=yes --project=/home/pkgeval/.julia/packages/T8code/KebPI /home/pkgeval/.julia/packages/T8code/KebPI/test/test_all.jl`,["PYTHON=", "LANG=C.UTF-8", "PATH=/home/pkgeval/.julia/artifacts/c9b8f588306f556fe6a81910916832bbd3fa9eca/bin:/home/pkgeval/.julia/artifacts/05d8c79b270470018e9de8dd24ddb6d7954aff9d/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin", "OPENBLAS_MAIN_FREE=1", "JULIA_CPU_THREADS=1", "JULIA_NUM_PRECOMPILE_TASKS=1", "DISPLAY=:1", "JULIA_LOAD_PATH=@:/tmp/jl_8OpGEz", "UCX_MEMTYPE_CACHE=no", "PKGEVAL=true", "OPENBLAS_NUM_THREADS=1", "UCX_ERROR_SIGNALS=SIGILL,SIGBUS,SIGFPE", "LD_LIBRARY_PATH=/opt/julia/bin/../lib/julia:/home/pkgeval/.julia/artifacts/c9b8f588306f556fe6a81910916832bbd3fa9eca/lib:/home/pkgeval/.julia/artifacts/05d8c79b270470018e9de8dd24ddb6d7954aff9d/lib:/opt/julia/bin/../lib/julia:/opt/julia/bin/../lib", "CI=true", "JULIA_PKG_PRECOMPILE_AUTO=0", "JULIA_PKGEVAL=true", "JULIA_DEPOT_PATH=/home/pkgeval/.julia:/usr/local/share/julia:", "JULIA_NUM_THREADS=1", "R_HOME=*", "HOME=/home/pkgeval"]), ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:598 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:513 [3] run(::Cmd) @ Base ./process.jl:510 [4] macro expansion @ ~/.julia/packages/T8code/KebPI/test/runtests.jl:20 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [6] macro expansion @ ~/.julia/packages/T8code/KebPI/test/runtests.jl:16 [inlined] [7] macro expansion @ ./timing.jl:581 [inlined] [8] macro expansion @ ~/.julia/packages/T8code/KebPI/test/runtests.jl:12 [inlined] [9] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [10] macro expansion @ ~/.julia/packages/T8code/KebPI/test/runtests.jl:9 [inlined] [11] macro expansion @ ./timing.jl:581 [inlined] [12] top-level scope @ ~/.julia/packages/T8code/KebPI/test/runtests.jl:315 [13] include(fname::String) @ Main ./sysimg.jl:38 [14] top-level scope @ none:6 [15] eval @ ./boot.jl:430 [inlined] [16] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [17] _start() @ Base ./client.jl:531 17.457231 seconds (1.37 M allocations: 73.835 MiB, 23.99% compilation time) [ Info: Starting serial tests [libsc] This is libsc 0.0.0 [libsc] CPP /opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/usr/local/bin/mpicc -E [libsc] CPPFLAGS [libsc] CC /opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/usr/local/bin/mpicc [libsc] CFLAGS [libsc] LDFLAGS -Wl,-rpath -Wl,/workspace/destdir/lib -Wl,--enable-new-dtags -L/workspace/x86_64-linux-gnu-libgfortran5-cxx11-mpi+mpich/destdir/lib [libsc] LIBS /opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/usr/local/lib/libz.so m [t8] This is t8 3.0.1 [t8] CXX /opt/bin/x86_64-linux-gnu-libgfortran5-cxx11-mpi+mpich/x86_64-linux-gnu-g++ [t8] CXXFLAGS -O3 -DNDEBUG [t8] CC /opt/bin/x86_64-linux-gnu-libgfortran5-cxx11-mpi+mpich/x86_64-linux-gnu-gcc [t8] CFLAGS -O3 -DNDEBUG [t8] LDFLAGS [t8] LIBS P4EST::P4EST SC::SC MPI::MPI_C [t8] Constructed uniform forest with 1 global elements. [t8] Constructed uniform forest with 2 global elements. [t8] Incompatible file-type. t8code works with ASCII-type msh-files with the versions: [t8] 2.X [t8] 4.X [t8] Incompatible file-type. t8code works with ASCII-type msh-files with the versions: [t8] 2.X [t8] 4.X [t8] Constructed uniform forest with 1 global elements. [t8] Constructed uniform forest with 1 global elements. [t8] Constructed uniform forest with 1 global elements. [t8] Constructed uniform forest with 1 global elements. [t8] Constructed uniform forest with 1 global elements. [t8] Constructed uniform forest with 1 global elements. [t8] Constructed uniform forest with 2 global elements. [t8] Constructed uniform forest with 4 global elements. [t8] Constructed uniform forest with 8 global elements. [t8] Constructed uniform forest with 16 global elements. [t8] Constructed uniform forest with 1 global elements. [t8] Constructed uniform forest with 4 global elements. [t8] Constructed uniform forest with 16 global elements. [t8] Constructed uniform forest with 64 global elements. [t8] Constructed uniform forest with 256 global elements. [t8] Constructed uniform forest with 2 global elements. [t8] Constructed uniform forest with 8 global elements. [t8] Constructed uniform forest with 32 global elements. [t8] Constructed uniform forest with 128 global elements. [t8] Constructed uniform forest with 512 global elements. [t8] Constructed uniform forest with 1 global elements. [t8] Constructed uniform forest with 8 global elements. [t8] Constructed uniform forest with 64 global elements. [t8] Constructed uniform forest with 512 global elements. [t8] Constructed uniform forest with 4096 global elements. [t8] Constructed uniform forest with 6 global elements. [t8] Constructed uniform forest with 48 global elements. [t8] Constructed uniform forest with 384 global elements. [t8] Constructed uniform forest with 3072 global elements. [t8] Constructed uniform forest with 24576 global elements. [t8] Constructed uniform forest with 2 global elements. [t8] Constructed uniform forest with 16 global elements. [t8] Constructed uniform forest with 128 global elements. [t8] Constructed uniform forest with 1024 global elements. [t8] Constructed uniform forest with 8192 global elements. [t8] Constructed uniform forest with 3 global elements. [t8] Into t8_forest_adapt from 3 total elements [t8] Done t8_forest_adapt with 30 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Constructed uniform forest with 30 global elements. [t8] Into t8_forest_adapt from 3 total elements [t8] Done t8_forest_adapt with 30 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Into t8_forest_adapt from 30 total elements [t8] Done t8_forest_adapt with 276 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Constructed uniform forest with 276 global elements. [t8] Into t8_forest_adapt from 3 total elements [t8] Done t8_forest_adapt with 30 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Into t8_forest_adapt from 30 total elements [t8] Done t8_forest_adapt with 276 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Into t8_forest_adapt from 276 total elements [t8] Done t8_forest_adapt with 2424 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Constructed uniform forest with 2424 global elements. [t8] Into t8_forest_adapt from 3 total elements [t8] Done t8_forest_adapt with 30 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Into t8_forest_adapt from 30 total elements [t8] Done t8_forest_adapt with 276 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Into t8_forest_adapt from 276 total elements [t8] Done t8_forest_adapt with 2424 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Into t8_forest_adapt from 2424 total elements [t8] Done t8_forest_adapt with 20688 total elements [t8] Enter forest partition. [t8] Done forest partition. [t8] Constructed uniform forest with 20688 global elements. [ Info: Finished serial tests 6.281042 seconds (2.76 M allocations: 114.726 MiB, 1.08% gc time, 91.91% compilation time) Test Summary: | Pass Error Total Time T8code.jl tests | 66717 1 66718 1m15.3s Aqua.jl | 11 11 51.4s MPI | 1 1 2 17.5s serial | 66705 66705 6.3s ERROR: LoadError: Some tests did not pass: 66717 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/T8code/KebPI/test/runtests.jl:8 Testing failed after 96.09s ERROR: LoadError: Package T8code errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2124 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 154.72s: package tests unexpectedly errored