Package evaluation of StructuralIdentifiability on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T11:23:06.423 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.57s ################################################################################ # Installation # Installing StructuralIdentifiability... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [220ca800] + StructuralIdentifiability v0.5.14 Updating `~/.julia/environments/v1.11/Manifest.toml` [c3fe647b] + AbstractAlgebra v0.44.11 [a9b6321e] + Atomix v1.1.1 [861a8166] + Combinatorics v1.0.2 [34da2185] + Compat v4.16.0 [864edb3b] + DataStructures v0.18.22 [e2ba6199] + ExprTools v0.1.10 [0b43b601] + Groebner v0.9.0 [18e54dd8] + IntegerMathUtils v0.1.2 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.0 [1914dd2f] + MacroTools v0.5.15 ⌅ [2edaba10] + Nemo v0.48.4 [bac558e1] + OrderedCollections v1.8.0 [3e851597] + ParamPunPam v0.5.2 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [27ebfcd6] + Primes v0.5.7 [92933f4c] + ProgressMeter v1.10.4 [fb686558] + RandomExtensions v0.4.4 [220ca800] + StructuralIdentifiability v0.5.14 [a759f4b9] + TimerOutputs v0.5.28 [013be700] + UnsafeAtomics v0.3.0 [e134572f] + FLINT_jll v300.200.100+0 [656ef2d0] + OpenBLAS32_jll v0.3.29+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [781609d7] + GMP_jll v6.3.0+0 [3a97d323] + MPFR_jll v4.2.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.65s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 220.27s ################################################################################ # Testing # Testing StructuralIdentifiability Status `/tmp/jl_mMtwV6/Project.toml` [c3fe647b] AbstractAlgebra v0.44.11 [4c88cf16] Aqua v0.8.11 [2a0fbf3d] CPUSummary v0.2.6 [861a8166] Combinatorics v1.0.2 [864edb3b] DataStructures v0.18.22 [0b43b601] Groebner v0.9.0 [c8e1da08] IterTools v1.10.0 [1914dd2f] MacroTools v0.5.15 ⌅ [2edaba10] Nemo v0.48.4 [3e851597] ParamPunPam v0.5.2 ⌅ [aea7be01] PrecompileTools v1.2.1 [27ebfcd6] Primes v0.5.7 [276daf66] SpecialFunctions v2.5.0 [220ca800] StructuralIdentifiability v0.5.14 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [a759f4b9] TimerOutputs v0.5.28 [ade2ca70] Dates v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [44cfe95a] Pkg v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_mMtwV6/Manifest.toml` [c3fe647b] AbstractAlgebra v0.44.11 [4c88cf16] Aqua v0.8.11 [a9b6321e] Atomix v1.1.1 [2a0fbf3d] CPUSummary v0.2.6 [861a8166] Combinatorics v1.0.2 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [adafc99b] CpuId v0.3.1 [864edb3b] DataStructures v0.18.22 [ab62b9b5] DeepDiffs v1.2.0 [ffbed154] DocStringExtensions v0.9.4 [e2ba6199] ExprTools v0.1.10 [0b43b601] Groebner v0.9.0 [615f187c] IfElse v0.1.1 [18e54dd8] IntegerMathUtils v0.1.2 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.15 ⌅ [2edaba10] Nemo v0.48.4 [bac558e1] OrderedCollections v1.8.0 [3e851597] ParamPunPam v0.5.2 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [27ebfcd6] Primes v0.5.7 [92933f4c] ProgressMeter v1.10.4 [fb686558] RandomExtensions v0.4.4 [276daf66] SpecialFunctions v2.5.0 [aedffcd0] Static v1.2.0 [220ca800] StructuralIdentifiability v0.5.14 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [a759f4b9] TimerOutputs v0.5.28 [013be700] UnsafeAtomics v0.3.0 [e134572f] FLINT_jll v300.200.100+0 [656ef2d0] OpenBLAS32_jll v0.3.29+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [781609d7] GMP_jll v6.3.0+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [3a97d323] MPFR_jll v4.2.1+0 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling TestExt... 3500.5 ms ✓ AbstractAlgebra → TestExt 1 dependency successfully precompiled in 4 seconds. 16 already precompiled. Resolving package versions... Updating `/tmp/jl_mMtwV6/Project.toml` [961ee093] + ModelingToolkit v9.71.0 Updating `/tmp/jl_mMtwV6/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 [4c555306] + ArrayLayouts v1.11.1 [e2ed5e7c] + Bijections v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.5.0 [70df07ce] + BracketingNonlinearSolve v1.1.3 [00ebfdb7] + CSTParser v3.4.3 [d360d2e6] + ChainRulesCore v1.25.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 ⌅ [a80b9123] + CommonMark v0.8.16 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.5.8 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [2b5f629d] + DiffEqBase v6.167.2 [459566f4] + DiffEqCallbacks v4.4.0 [77a26b50] + DiffEqNoiseProcess v5.24.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.50 [8d63f2c5] + DispatchDoctor v0.4.19 [31c24e10] + Distributions v0.25.118 [5b8099bc] + DomainSets v0.7.15 [7c1d4256] + DynamicPolynomials v0.6.1 [06fc5a27] + DynamicQuantities v1.8.0 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.8 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.1.2 [1a297f60] + FillArrays v1.13.0 [64ca27bc] + FindFirstFunctions v1.4.1 [6a86dc24] + FiniteDiff v2.27.0 [1fa38f19] + Format v1.3.7 ⌅ [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [c27321d9] + Glob v1.3.1 [86223c79] + Graphs v1.12.1 [34004b35] + HypergeometricFunctions v0.3.28 [d25df0c9] + Inflate v0.1.5 [8197267c] + IntervalSets v0.7.10 [3587e190] + InverseFunctions v0.1.17 [82899510] + IteratorInterfaceExtensions v1.0.0 [ae98c720] + Jieko v0.2.1 ⌅ [98e50ef6] + JuliaFormatter v1.0.62 [ccbc3e58] + JumpProcesses v9.14.2 [ba0b0d4f] + Krylov v0.9.10 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.7 [10f19ff3] + LayoutPointers v0.1.17 [5078a376] + LazyArrays v2.6.1 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.3.0 [7ed4a6bd] + LinearSolve v3.7.2 [d8e11817] + MLStyle v0.4.17 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [961ee093] + ModelingToolkit v9.71.0 [2e0e35c7] + Moshi v0.3.5 [46d2c3a1] + MuladdMacro v0.2.4 [102ac46a] + MultivariatePolynomials v0.5.7 [d8a4904e] + MutableArithmetics v1.6.4 [d41bc354] + NLSolversBase v7.9.1 [77ba4419] + NaNMath v1.1.3 [8913a72c] + NonlinearSolve v4.5.1 [be0214bd] + NonlinearSolveBase v1.5.2 [5959db7a] + NonlinearSolveFirstOrder v1.3.1 [9a2c21bd] + NonlinearSolveQuasiNewton v1.2.1 [26075421] + NonlinearSolveSpectralMethods v1.1.1 [6fe1bfb0] + OffsetArrays v1.16.0 [429524aa] + Optim v1.12.0 [90014a1f] + PDMats v0.11.33 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.4 [f517fe37] + Polyester v0.7.16 [1d0040c9] + PolyesterWeave v0.2.2 [85a6dd25] + PositiveFactorizations v0.2.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.0 [e6cf234a] + RandomNumbers v1.6.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.31.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.1.1 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.13 [9dfe8606] + SCCNonlinearSolve v1.0.0 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.82.1 [19f34311] + SciMLJacobianOperators v0.1.2 [c0aeaf25] + SciMLOperators v0.3.13 [53ae85a6] + SciMLStructures v1.7.0 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.2.1 [699a6c99] + SimpleTraits v0.9.4 [a2af1166] + SortingAlgorithms v1.2.1 [0a514795] + SparseMatrixColorings v0.4.16 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.4.0 [7792a7ef] + StrideArraysCore v0.5.7 [2efcf032] + SymbolicIndexingInterface v0.3.38 [19f23fe9] + SymbolicLimits v0.2.2 [d1185830] + SymbolicUtils v3.25.1 [0c5d862f] + Symbolics v6.37.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [ed4db957] + TaskLocalValues v0.1.2 [8ea1fca8] + TermInterface v2.0.0 [1c621080] + TestItems v1.0.0 [8290d209] + ThreadingUtilities v0.5.2 [0796e94c] + Tokenize v0.5.29 [410a4b4d] + Tricks v0.1.10 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.5.2 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.22.0 [a7c27f48] + Unityper v0.1.6 [897b6980] + WeakValueDicts v0.1.0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [9fa8497b] + Future v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [a63ad114] + Mmap v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [4607b0f0] + SuiteSparse Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Resolving package versions... Updating `/tmp/jl_mMtwV6/Project.toml` [0c5d862f] + Symbolics v6.37.1 No Changes to `/tmp/jl_mMtwV6/Manifest.toml` Precompiling ModelingToolkit... 4620.5 ms ✓ LazyArrays 1226.2 ms ✓ MaybeInplace 3079.1 ms ✓ SciMLOperators 2503.7 ms ✓ SymbolicIndexingInterface 949.2 ms ✓ TruncatedStacktraces 5179.0 ms ✓ Latexify 2755.1 ms ✓ DispatchDoctor 1006.1 ms ✓ oneTBB_jll 1393.2 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1297.9 ms ✓ ResettableStacks 4378.5 ms ✓ DomainSets 1328.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1302.9 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 2444.3 ms ✓ StaticArrayInterface 52001.7 ms ✓ JuliaFormatter 4420.2 ms ✓ StatsBase 3565.4 ms ✓ IntelOpenMP_jll 4222.2 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 8620.1 ms ✓ Graphs 1344.2 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 3963.2 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1823.9 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1071.1 ms ✓ FastPower → FastPowerForwardDiffExt 1155.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 2405.8 ms ✓ LazyArrays → LazyArraysStaticArraysExt 2014.4 ms ✓ LazyArrays → LazyArraysBlockArraysExt 1147.1 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 1003.2 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 1386.5 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 4359.0 ms ✓ RecursiveArrayTools 1803.5 ms ✓ Latexify → SparseArraysExt 10801.5 ms ✓ DynamicQuantities 875.2 ms ✓ DispatchDoctor → DispatchDoctorEnzymeCoreExt 1461.7 ms ✓ DispatchDoctor → DispatchDoctorChainRulesCoreExt 1451.6 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 953.7 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 955.8 ms ✓ CloseOpenIntervals 1598.4 ms ✓ LayoutPointers 10429.2 ms ✓ Distributions 3271.7 ms ✓ MKL_jll 61269.1 ms ✓ SymbolicUtils 2082.1 ms ✓ NLSolversBase 2395.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 10435.0 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 23036.4 ms ✓ SciMLBase 3160.1 ms ✓ DynamicQuantities → DynamicQuantitiesUnitfulExt 1421.2 ms ✓ DynamicQuantities → DynamicQuantitiesLinearAlgebraExt 1913.5 ms ✓ StrideArraysCore 3249.5 ms ✓ Distributions → DistributionsTestExt 3478.3 ms ✓ Distributions → DistributionsChainRulesCoreExt 4780.0 ms ✓ SymbolicLimits 4698.5 ms ✓ LineSearches 2778.3 ms ✓ SciMLBase → SciMLBaseMLStyleExt 2277.2 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 6947.4 ms ✓ SciMLJacobianOperators 2160.5 ms ✓ SCCNonlinearSolve 1617.3 ms ✓ Polyester 7467.7 ms ✓ Optim 25648.6 ms ✓ LinearSolve 128150.3 ms ✓ Symbolics 9525.1 ms ✓ LineSearch 15748.8 ms ✓ NonlinearSolveBase 1654.0 ms ✓ FastBroadcast 3706.7 ms ✓ LinearSolve → LinearSolveEnzymeExt 8257.0 ms ✓ LinearSolve → LinearSolveSparseArraysExt 9482.6 ms ✓ Symbolics → SymbolicsForwardDiffExt 8108.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceSymbolicsExt 51900.4 ms ✓ LineSearch → LineSearchLineSearchesExt 12908.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 39247.9 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 1953.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 1758.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 23192.7 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 6026.8 ms ✓ BracketingNonlinearSolve 9819.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 1982.4 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 4552.8 ms ✓ DiffEqBase 33758.1 ms ✓ SimpleNonlinearSolve 3270.7 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 3354.3 ms ✓ DiffEqBase → DiffEqBaseUnitfulExt 3923.1 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 4720.4 ms ✓ DiffEqBase → DiffEqBaseDistributionsExt 3238.2 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 9694.6 ms ✓ DiffEqCallbacks 3395.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseDiffEqBaseExt 3443.4 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveDiffEqBaseExt 2630.0 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 7539.3 ms ✓ JumpProcesses 50418.1 ms ✓ DiffEqNoiseProcess 45209.5 ms ✓ NonlinearSolveSpectralMethods 81821.1 ms ✓ NonlinearSolveQuasiNewton 51449.9 ms ✓ NonlinearSolveFirstOrder 3545.3 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 5440.1 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 76585.3 ms ✓ NonlinearSolve 402973.3 ms ✓ ModelingToolkit 35040.9 ms ✓ ModelingToolkit → MTKChainRulesCoreExt 97 dependencies successfully precompiled in 1507 seconds. 199 already precompiled. Precompiling GroebnerDynamicPolynomialsExt... 10026.5 ms ✓ Groebner → GroebnerDynamicPolynomialsExt 1 dependency successfully precompiled in 11 seconds. 43 already precompiled. Precompiling SymbolicsNemoExt... Info Given SymbolicsNemoExt was explicitly requested, output will be shown live  [ Info: Assuming ((1//128)*(√((5120//1)*(a^4)) - (80//1)*(a^2))) != 0 [ Info: Assuming ((1//128)*(√((5120//1)*(a^4)) - (80//1)*(a^2))) != 0 113595.6 ms ✓ Symbolics → SymbolicsNemoExt 1 dependency successfully precompiled in 115 seconds. 155 already precompiled. 1 dependency had output during precompilation: ┌ Symbolics → SymbolicsNemoExt │ [Output was shown above] └ Precompiling SymbolicsGroebnerExt... 16581.6 ms ✓ Symbolics → SymbolicsGroebnerExt 1 dependency successfully precompiled in 18 seconds. 160 already precompiled. Precompiling MTKDeepDiffsExt... 31504.6 ms ✓ ModelingToolkit → MTKDeepDiffsExt 1 dependency successfully precompiled in 34 seconds. 297 already precompiled. Precompiling ModelingToolkitSIExt... 50094.4 ms ✓ StructuralIdentifiability → ModelingToolkitSIExt 1 dependency successfully precompiled in 53 seconds. 314 already precompiled. [ Info: Testing started [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: a [ Info: Inputs: [ Info: Outputs: y ┌ Warning: New variable c, treating as a scalar parameter └ @ StructuralIdentifiability ~/.julia/packages/StructuralIdentifiability/r7Tss/src/pb_representation.jl:94 [ Info: Summary of the model: [ Info: State variables: x1, x2, x3 [ Info: Parameters: a [ Info: Inputs: u [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: a [ Info: Parameters: b [ Info: Inputs: c [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: a, b [ Info: Parameters: k1, k2 [ Info: Inputs: c [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x, y [ Info: Parameters: a, b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x, y [ Info: Parameters: a, b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x, y [ Info: Parameters: a, b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x, y [ Info: Parameters: a, b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a [ Info: Inputs: u [ Info: Outputs: y 2.300995 seconds (895.37 k allocations: 45.149 MiB, 99.57% compilation time) 0.001931 seconds (7.10 k allocations: 309.891 KiB) 0.002116 seconds (10.79 k allocations: 484.461 KiB) 0.002061 seconds (10.78 k allocations: 481.336 KiB) 0.002613 seconds (14.55 k allocations: 637.047 KiB) 0.001546 seconds (7.96 k allocations: 361.945 KiB) 0.001112 seconds (7.48 k allocations: 302.016 KiB) 15.277413 seconds (5.77 M allocations: 292.784 MiB, 0.55% gc time, 99.81% compilation time) [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: [ Info: Inputs: u [ Info: Outputs: y 0.395187 seconds (99.00 k allocations: 5.119 MiB, 98.47% compilation time) [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: [ Info: Inputs: u [ Info: Outputs: y 0.012996 seconds (9.83 k allocations: 540.125 KiB, 90.72% compilation time) [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a, b [ Info: Inputs: u [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2, x3 [ Info: Parameters: a [ Info: Inputs: u [ Info: Outputs: y1, y2 IOEQS: Dict{QQMPolyRingElem, QQMPolyRingElem}(y1(t)_2 => -y1(t)_0 + y1(t)_2, y2(t)_1 => -a*y2(t)_0 + a*u(t)_0 + y2(t)_1 - u(t)_1) [ Info: Summary of the model: [ Info: State variables: x0, x1 [ Info: Parameters: a01, a12, a21 [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x0, x1 [ Info: Parameters: a, b, c, d [ Info: Inputs: u [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: S, I, W, R [ Info: Parameters: a, bi, bw, gam, k, mu, xi [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2, x3, x4 [ Info: Parameters: alpha, b, beta, c, delta, gama, sigma [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: a1, a2, a21 [ Info: Inputs: [ Info: Outputs: y1 [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: a1, a2, a21 [ Info: Inputs: u [ Info: Outputs: y1 [ Info: Summary of the model: [ Info: State variables: x1, x2, x3 [ Info: Parameters: a01, a12, a13, a21, a31 [ Info: Inputs: u [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: S, E, In [ Info: Parameters: N, a, b, nu [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Assessing local identifiability [ Info: Assessing global identifiability [ Info: Computing IO-equations [ Info: Computed IO-equations in 0.003468676 seconds [ Info: Computing Wronskians [ Info: Computed Wronskians in 6.196028486 seconds [ Info: Dimensions of the Wronskians [3] [ Info: Ranks of the Wronskians computed in 0.086042691 seconds [ Info: Global identifiability assessed in 7.416460668 seconds [ Info: Assessing local identifiability [ Info: Assessing global identifiability [ Info: Functions to check involve states [ Info: Computing IO-equations [ Info: Computed IO-equations in 0.003343398 seconds [ Info: No parameters, so Wronskian computation is not needed [ Info: Global identifiability assessed in 0.815969249 seconds [ Info: Assessing local identifiability [ Info: Assessing global identifiability [ Info: Global identifiability assessed in 5.135e-5 seconds [ Info: Assessing local identifiability [ Info: Assessing global identifiability [ Info: Functions to check involve states [ Info: Computing IO-equations [ Info: Computed IO-equations in 0.041401816 seconds [ Info: Computing Wronskians [ Info: Computed Wronskians in 0.376475087 seconds [ Info: Dimensions of the Wronskians [5] [ Info: Ranks of the Wronskians computed in 4.2339e-5 seconds [ Info: Simplifying generating set. Simplification level: standard ⌜ # Computing specializations.. Time: 0:00:14 ✓ # Computing specializations.. Time: 0:00:16 [ Info: Computing normal forms of degree 2 in 4 variables [ Info: Used 4 specializations in 15.720574911 seconds, found 3 relations ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 31 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm22BlockFrequencyInfoImplINS_17MachineBasicBlockEE15initializeLoopsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm22BlockFrequencyInfoImplINS_17MachineBasicBlockEE9calculateERKNS_15MachineFunctionERKNS_28MachineBranchProbabilityInfoERKNS_15MachineLoopInfoE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm25MachineBlockFrequencyInfo9calculateERKNS_15MachineFunctionERKNS_28MachineBranchProbabilityInfoERKNS_15MachineLoopInfoE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm25MachineBlockFrequencyInfo20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) operator() at /source/src/jitlayers.cpp:1388 _ZN4llvm3orc14IRCompileLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6detail18UniqueFunctionBaseIvJSt10unique_ptrINS_3orc4TaskESt14default_deleteIS4_EEEE8CallImplIPFvS7_EEEvPvRS7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) addModule at /source/src/jitlayers.cpp:1875 jl_add_to_ee at /source/src/jitlayers.cpp:2306 _jl_compile_codeinst at /source/src/jitlayers.cpp:277 jl_generate_fptr_impl at /source/src/jitlayers.cpp:536 jl_compile_method_internal at /source/src/gf.c:2536 [inlined] jl_compile_method_internal at /source/src/gf.c:2423 _jl_invoke at /source/src/gf.c:2940 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #simplified_generating_set#468 at ./none:0 simplified_generating_set at ./none:0 unknown function (ip: 0x78ce6a304c36) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #initial_identifiable_functions#477 at ./none:0 initial_identifiable_functions at ./none:0 [inlined] #check_identifiability#488 at ./none:0 check_identifiability at ./none:0 [inlined] #assess_global_identifiability#499 at ./none:0 assess_global_identifiability at ./none:0 [inlined] macro expansion at ./timing.jl:421 [inlined] #_assess_identifiability#722 at /home/pkgeval/.julia/packages/StructuralIdentifiability/r7Tss/src/StructuralIdentifiability.jl:168 _assess_identifiability at /home/pkgeval/.julia/packages/StructuralIdentifiability/r7Tss/src/StructuralIdentifiability.jl:134 [inlined] #718 at /home/pkgeval/.julia/packages/StructuralIdentifiability/r7Tss/src/StructuralIdentifiability.jl:115 with_logstate at ./logging/logging.jl:522 with_logger at ./logging/logging.jl:632 [inlined] #assess_identifiability#717 at /home/pkgeval/.julia/packages/StructuralIdentifiability/r7Tss/src/StructuralIdentifiability.jl:113 assess_identifiability at /home/pkgeval/.julia/packages/StructuralIdentifiability/r7Tss/src/StructuralIdentifiability.jl:104 unknown function (ip: 0x78ce6a4f4ee6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_body at /source/src/interpreter.c:562 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x78ce88b00082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 macro expansion at /home/pkgeval/.julia/packages/StructuralIdentifiability/r7Tss/test/runtests.jl:161 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] macro expansion at /home/pkgeval/.julia/packages/StructuralIdentifiability/r7Tss/test/runtests.jl:159 [inlined] macro expansion at ./timing.jl:581 [inlined] top-level scope at /home/pkgeval/.julia/packages/StructuralIdentifiability/r7Tss/test/runtests.jl:158 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_invoke at /source/src/gf.c:2955 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x78ce88b00082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 [ Info: Computing 5 Groebner bases for degrees (3, 3) for block orderings jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x78ce89e1f249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x716789163222) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2142 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2082 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x71678915b7ed) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1837 unknown function (ip: 0x71678914fdaa) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x71678914faad) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x71678914f49d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x71678914b946) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x71678a3e6249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000071677ce00010 Total snapshots: 21. Utilization: 0% ╎21 @Base/client.jl:531; _start() ╎ 21 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 21 @Base/Base.jl:557; include(mod::Module, _path::String) ╎ 21 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path:… ╎ 21 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod:… ╎ 21 @Base/boot.jl:430; eval ╎ ╎ 21 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeo… ╎ ╎ 21 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 21 @Pkg/src/API.jl:147; test ╎ ╎ 21 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 21 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::t… ╎ ╎ ╎ 21 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec};… ╎ ╎ ╎ 21 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io… ╎ ╎ ╎ 21 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vect… ╎ ╎ ╎ 21 …src/Operations.jl:2007; test ╎ ╎ ╎ 21 …src/Operations.jl:2063; test(ctx::Pkg.Types.Context, pkgs… ╎ ╎ ╎ ╎ 21 …rc/Operations.jl:1837; kwcall(::@NamedTuple{preferences:… ╎ ╎ ╎ ╎ 21 …rc/Operations.jl:1845; #sandbox#115 ╎ ╎ ╎ ╎ 21 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 21 @Base/file.jl:815; mktempdir(fn::Function, parent::Str… ╎ ╎ ╎ ╎ 21 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#… ╎ ╎ ╎ ╎ ╎ 21 …/Operations.jl:1898; (::Pkg.Operations.var"#116#121… ╎ ╎ ╎ ╎ ╎ 21 …/Operations.jl:1789; with_temp_env(fn::Pkg.Operati… ╎ ╎ ╎ ╎ ╎ 21 …Operations.jl:1931; (::Pkg.Operations.var"#118#12… ╎ ╎ ╎ ╎ ╎ 21 @Base/env.jl:265; withenv(::Pkg.Operations.var"#1… ╎ ╎ ╎ ╎ ╎ 21 …Operations.jl:2082; (::Pkg.Operations.var"#131#… ╎ ╎ ╎ ╎ ╎ ╎ 21 …perations.jl:2142; subprocess_handler(cmd::Cmd… ╎ ╎ ╎ ╎ ╎ ╎ 21 …e/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 21 …e/process.jl:694; wait(x::Base.Process, sync… ╎ ╎ ╎ ╎ ╎ ╎ 21 …ondition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 21 …ondition.jl:130; wait(c::Base.GenericCondi… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 …ase/task.jl:1021; wait() 20╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 …ase/task.jl:1012; poptask(W::Base.Intrus… [31] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/StructuralIdentifiability/r7Tss/test/identifiability.jl:1 _ZN4llvm19getUnderlyingObjectEPKNS_5ValueEj at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13BasicAAResult10aliasCheckEPKNS_5ValueENS_12LocationSizeES3_S4_RNS_11AAQueryInfoEPKNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13BasicAAResult5aliasERKNS_14MemoryLocationES3_RNS_11AAQueryInfoEPKNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm9AAResults5aliasERKNS_14MemoryLocationES3_RNS_11AAQueryInfoEPKNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm23MemoryDependenceResults30getSimplePointerDependencyFromERKNS_14MemoryLocationEbNS_14ilist_iteratorINS_12ilist_detail12node_optionsINS_11InstructionELb1ELb0EvEELb0ELb0EEEPNS_10BasicBlockEPS7_PjRNS_14BatchAAResultsE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm23MemoryDependenceResults24getPointerDependencyFromERKNS_14MemoryLocationEbNS_14ilist_iteratorINS_12ilist_detail12node_optionsINS_11InstructionELb1ELb0EvEELb0ELb0EEEPNS_10BasicBlockEPS7_PjRNS_14BatchAAResultsE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm23MemoryDependenceResults23getNonLocalInfoForBlockEPNS_11InstructionERKNS_14MemoryLocationEbPNS_10BasicBlockEPSt6vectorINS_16NonLocalDepEntryESaIS9_EEjRNS_14BatchAAResultsE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm23MemoryDependenceResults27getNonLocalPointerDepFromBBEPNS_11InstructionERKNS_12PHITransAddrERKNS_14MemoryLocationEbPNS_10BasicBlockERNS_15SmallVectorImplINS_17NonLocalDepResultEEERNS_8DenseMapISA_PNS_5ValueENS_12DenseMapInfoISA_vEENS_6detail12DenseMapPairISA_SH_EEEEbb at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm23MemoryDependenceResults28getNonLocalPointerDependencyEPNS_11InstructionERNS_15SmallVectorImplINS_17NonLocalDepResultEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm7GVNPass19processNonLocalLoadEPNS_8LoadInstE.part.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm7GVNPass18processInstructionEPNS_11InstructionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) PkgEval terminated after 2723.56s: test duration exceeded the time limit