Package evaluation of StateSpaceRoutines on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T15:16:40.154 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.49s ################################################################################ # Installation # Installing StateSpaceRoutines... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [261fd431] + StateSpaceRoutines v0.4.3 Updating `~/.julia/environments/v1.11/Manifest.toml` [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [a9b6321e] + Atomix v1.1.1 [d360d2e6] + ChainRulesCore v1.25.1 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [187b0558] + ConstructionBase v1.5.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [aaf54ef3] + DistributedArrays v0.6.7 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.4 [1a297f60] + FillArrays v1.13.0 [f6369f11] + ForwardDiff v1.0.1 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [18e54dd8] + IntegerMathUtils v0.1.2 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [63c18a36] + KernelAbstractions v0.9.34 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [872c559c] + NNlib v0.9.30 [77ba4419] + NaNMath v1.1.3 [3bd65402] + Optimisers v0.4.6 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.33 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 ⌅ [f2b01f46] + Roots v1.4.1 [7e506255] + ScopedValues v1.3.0 ⌅ [efcf1570] + Setfield v0.8.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [261fd431] + StateSpaceRoutines v0.4.3 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.4.0 [9f7883ad] + Tracker v0.2.38 [013be700] + UnsafeAtomics v0.3.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.57s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 24.04s ################################################################################ # Testing # Testing StateSpaceRoutines Status `/tmp/jl_j2ChVM/Project.toml` [6e4b80f9] BenchmarkTools v1.6.0 [aaf54ef3] DistributedArrays v0.6.7 [31c24e10] Distributions v0.25.118 [5789e2e9] FileIO v1.17.0 [f67ccb44] HDF5 v0.17.2 [4138dd39] JLD v0.13.5 [033835bb] JLD2 v0.5.12 [90014a1f] PDMats v0.11.33 ⌅ [f2b01f46] Roots v1.4.1 [261fd431] StateSpaceRoutines v0.4.3 [10745b16] Statistics v1.11.1 [9f7883ad] Tracker v0.2.38 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [1a1011a3] SharedArrays v1.11.0 [2f01184e] SparseArrays v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_j2ChVM/Manifest.toml` [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [a9b6321e] Atomix v1.1.1 [6e4b80f9] BenchmarkTools v1.6.0 [a74b3585] Blosc v0.7.3 [d360d2e6] ChainRulesCore v1.25.1 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.5.8 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [aaf54ef3] DistributedArrays v0.6.7 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [5789e2e9] FileIO v1.17.0 [1a297f60] FillArrays v1.13.0 [f6369f11] ForwardDiff v1.0.1 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [c8ec2601] H5Zblosc v0.1.2 [f67ccb44] HDF5 v0.17.2 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [18e54dd8] IntegerMathUtils v0.1.2 [92d709cd] IrrationalConstants v0.2.4 [4138dd39] JLD v0.13.5 [033835bb] JLD2 v0.5.12 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [63c18a36] KernelAbstractions v0.9.34 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.15 [e1d29d7a] Missings v1.2.0 [872c559c] NNlib v0.9.30 [77ba4419] NaNMath v1.1.3 [3bd65402] Optimisers v0.4.6 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.33 [69de0a69] Parsers v2.8.1 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [27ebfcd6] Primes v0.5.7 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 ⌅ [f2b01f46] Roots v1.4.1 [7e506255] ScopedValues v1.3.0 ⌅ [efcf1570] Setfield v0.8.2 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [261fd431] StateSpaceRoutines v0.4.3 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.4.0 [9f7883ad] Tracker v0.2.38 [3bb67fe8] TranscodingStreams v0.11.3 [013be700] UnsafeAtomics v0.3.0 [0b7ba130] Blosc_jll v1.21.7+0 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+2 [458c3c95] OpenSSL_jll v3.0.16+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling Tracker... 13614.4 ms ✓ NNlib 2349.3 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 27416.2 ms ✓ NNlib → NNlibForwardDiffExt 2279.6 ms ✓ NNlib → NNlibSpecialFunctionsExt 52250.8 ms ✓ Tracker 5 dependencies successfully precompiled in 99 seconds. 51 already precompiled. Precompiling SparseArraysExt... 2057.1 ms ✓ KernelAbstractions → SparseArraysExt 1 dependency successfully precompiled in 2 seconds. 27 already precompiled. Precompiling TrackerPDMatsExt... 3103.9 ms ✓ Tracker → TrackerPDMatsExt 1 dependency successfully precompiled in 4 seconds. 65 already precompiled. Precompiling DistributedArrays... 1918.8 ms ✓ DistributedArrays 1 dependency successfully precompiled in 2 seconds. 8 already precompiled. Precompiling HDF5... 913.6 ms ✓ MicrosoftMPI_jll 1026.8 ms ✓ libaec_jll 3297.4 ms ✓ OpenMPI_jll 3333.3 ms ✓ MPICH_jll 3216.1 ms ✓ MPItrampoline_jll 3888.7 ms ✓ HDF5_jll 13329.2 ms ✓ HDF5 7 dependencies successfully precompiled in 29 seconds. 34 already precompiled. Precompiling JLD2... 54861.8 ms ✓ JLD2 1 dependency successfully precompiled in 56 seconds. 31 already precompiled. Test Summary: | Pass Total Time kalman_filter.jl | 26 26 1m53.5s Test Summary: | Pass Total Time chand_recursion.jl | 12 12 3.0s Precompiling JLD... 1099.5 ms ✓ Lz4_jll 1222.5 ms ✓ Blosc_jll 1152.7 ms ✓ Blosc 4486.9 ms ✓ H5Zblosc 6701.6 ms ✓ JLD 5 dependencies successfully precompiled in 15 seconds. 43 already precompiled. WARNING: using JLD.@load in module Main conflicts with an existing identifier. ┌ Warning: the following fields are present in type PDMat{Float64, Matrix{Float64}} saved in the file but not present in the type in the workspace: │ │ dim, │ │ Data in these fields will not be accessible └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:237 ┌ Warning: `MvNormal(σ::AbstractVector{<:Real})` is deprecated, use `MvNormal(LinearAlgebra.Diagonal(map(abs2, σ)))` instead. │ caller = ip:0x0 └ @ Core :-1 Mutation Tests: Test Failed at /home/pkgeval/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:72 Expression: s_t_nontemp[1] ≈ (test_file_outputs["s_t_nontemp_mutation"])[1] Evaluated: -4.848189271926299 ≈ -4.984343110376641 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined] [2] macro expansion @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:72 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [4] top-level scope @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:72 Mutation Tests: Test Failed at /home/pkgeval/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:73 Expression: ϵ_t[1] ≈ (test_file_outputs["eps_t_mutation"])[1] Evaluated: 0.1822008815715733 ≈ 0.1950520731790098 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined] [2] macro expansion @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:73 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [4] top-level scope @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:72 TPF tests: Test Failed at /home/pkgeval/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:82 Expression: out_no_parallel[1] ≈ out_parallel_one_worker[1] Evaluated: -305.4609810721637 ≈ -306.57976186068674 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined] [2] macro expansion @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:82 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [4] top-level scope @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:82 Test Summary: | Pass Fail Total Time tempered_particle_filter.jl | 8 3 11 2m40.9s Corection and Auxiliary Tests | 5 5 0.0s Selection Tests | 3 3 0.0s Mutation Tests | 2 2 3.6s TPF tests | 1 1 0.0s ERROR: LoadError: Some tests did not pass: 8 passed, 3 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/StateSpaceRoutines/MzGQi/test/runtests.jl:13 Testing failed after 491.54s ERROR: LoadError: Package StateSpaceRoutines errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2124 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 552.76s: package has test failures