Package evaluation of RAGTools on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T13:23:39.550 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.75s ################################################################################ # Installation # Installing RAGTools... Resolving package versions... Installed HTML_Entities ─ v1.0.1 Updating `~/.julia/environments/v1.11/Project.toml` [16ddad29] + RAGTools v0.3.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [d1d4a3ce] + BitFlags v0.1.9 [944b1d66] + CodecZlib v0.7.8 [f0e56b4a] + ConcurrentUtilities v2.5.0 [124859b0] + DataDeps v0.7.13 [460bff9d] + ExceptionUnwrapping v0.1.11 [7693890a] + HTML_Entities v1.0.1 [cd3eb016] + HTTP v1.10.15 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.2 [8ef0a80b] + Languages v0.4.6 [e6f89c97] + LoggingExtras v1.1.0 [739be429] + MbedTLS v1.1.9 ⌅ [e9f21f70] + OpenAI v0.9.1 [4d8831e6] + OpenSSL v1.4.3 [69de0a69] + Parsers v2.8.1 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.4 ⌅ [670122d1] + PromptingTools v0.73.0 [16ddad29] + RAGTools v0.3.0 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [6c6a2e73] + Scratch v1.2.1 [777ac1f9] + SimpleBufferStream v1.2.0 [fb8f903a] + Snowball v0.1.1 [9700d1a9] + StrTables v1.0.1 [c1b9e933] + StreamCallbacks v0.6.1 [856f2bd8] + StructTypes v1.11.0 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.5.2 [796a5d58] + WordTokenizers v0.5.6 [458c3c95] + OpenSSL_jll v3.0.16+0 [88f46535] + Snowball_jll v2.2.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building HTML_Entities → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/c4144ed3bc5f67f595622ad03c0e39fa6c70ccc7/build.log` Installation completed after 6.76s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 137.18s ################################################################################ # Testing # Testing RAGTools Status `/tmp/jl_n4MQYW/Project.toml` [1520ce14] AbstractTrees v0.4.5 [4c88cf16] Aqua v0.8.11 [cd3eb016] HTTP v1.10.15 [0f8b85d8] JSON3 v1.14.2 [92933f4c] ProgressMeter v1.10.4 ⌅ [670122d1] PromptingTools v0.73.0 [16ddad29] RAGTools v0.3.0 [fb8f903a] Snowball v0.1.1 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.11.0 [8dfed614] Test v1.11.0 [4ec0a83e] Unicode v1.11.0 Status `/tmp/jl_n4MQYW/Manifest.toml` [1520ce14] AbstractTrees v0.4.5 [4c88cf16] Aqua v0.8.11 [d1d4a3ce] BitFlags v0.1.9 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.16.0 [f0e56b4a] ConcurrentUtilities v2.5.0 [124859b0] DataDeps v0.7.13 [460bff9d] ExceptionUnwrapping v0.1.11 [7693890a] HTML_Entities v1.0.1 [cd3eb016] HTTP v1.10.15 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.2 [8ef0a80b] Languages v0.4.6 [e6f89c97] LoggingExtras v1.1.0 [739be429] MbedTLS v1.1.9 ⌅ [e9f21f70] OpenAI v0.9.1 [4d8831e6] OpenSSL v1.4.3 [69de0a69] Parsers v2.8.1 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [92933f4c] ProgressMeter v1.10.4 ⌅ [670122d1] PromptingTools v0.73.0 [16ddad29] RAGTools v0.3.0 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [6c6a2e73] Scratch v1.2.1 [777ac1f9] SimpleBufferStream v1.2.0 [fb8f903a] Snowball v0.1.1 [9700d1a9] StrTables v1.0.1 [c1b9e933] StreamCallbacks v0.6.1 [856f2bd8] StructTypes v1.11.0 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.5.2 [796a5d58] WordTokenizers v0.5.6 [458c3c95] OpenSSL_jll v3.0.16+0 [88f46535] Snowball_jll v2.2.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: OPENAI_API_KEY variable not set! OpenAI models will not be available - set API key directly via `PromptingTools.OPENAI_API_KEY=`! └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:189 ┌ Warning: OPENAI_API_KEY variable not set! OpenAI models will not be available - set API key directly via `PromptingTools.OPENAI_API_KEY=`! └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:189 ┌ Warning: OPENAI_API_KEY variable not set! OpenAI models will not be available - set API key directly via `PromptingTools.OPENAI_API_KEY=`! └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:189 [ Info: Embedding 2 documents... [ Info: Done embedding. Total cost: $0.0 [ Info: Embedding 2 documents... [ Info: Truncate_dimension set to 0. Skipping truncation [ Info: Done embedding. Total cost: $0.0 [ Info: Embedding 2 documents... [ Info: Done embedding. Total cost: $0.0 [ Info: Embedding 2 documents... [ Info: Done embedding. Total cost: $0.0 [ Info: Done processing DocumentTermMatrix. [ Info: Done processing DocumentTermMatrix. [ Info: Done processing DocumentTermMatrix. [ Info: Done processing DocumentTermMatrix. [ Info: Done processing DocumentTermMatrix. [ Info: Done processing DocumentTermMatrix. [ Info: Done processing DocumentTermMatrix. [ Info: Extracting metadata from 1 documents... [ Info: Done extracting the tags. Total cost: $0.0 ┌ Warning: Model `mock-emb` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 ┌ Warning: Model `mock-meta` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 build_index: Error During Test at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/preparation.jl:285 Got exception outside of a @test ArgumentError: api_key cannot be empty Stacktrace: [1] auth_header(::OpenAI.OpenAIProvider, api_key::String) @ OpenAI ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:40 [2] auth_header @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:19 [inlined] [3] _request(api::String, provider::PromptingTools.CustomProvider, api_key::String; method::String, query::Nothing, http_kwargs::@NamedTuple{retry_non_idempotent::Bool, retries::Int64, readtimeout::Int64}, streamcallback::Nothing, additional_headers::Vector{Pair{String, String}}, kwargs::@Kwargs{model::String, input::SubArray{SubString{String}, 1, Vector{SubString{String}}, Tuple{UnitRange{Int64}}, true}}) @ OpenAI ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:158 [4] _request (repeats 2 times) @ ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:140 [inlined] [5] #openai_request#15 @ ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:219 [inlined] [6] openai_request @ ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:213 [inlined] [7] #create_embeddings#300 @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:470 [inlined] [8] create_embeddings @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:465 [inlined] [9] #create_embeddings#291 @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:342 [inlined] [10] create_embeddings @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:333 [inlined] [11] macro expansion @ ./timing.jl:421 [inlined] [12] aiembed(prompt_schema::PromptingTools.CustomOpenAISchema, doc_or_docs::SubArray{SubString{String}, 1, Vector{SubString{String}}, Tuple{UnitRange{Int64}}, true}, postprocess::typeof(normalize); verbose::Bool, api_key::String, model::String, http_kwargs::@NamedTuple{retry_non_idempotent::Bool, retries::Int64, readtimeout::Int64}, api_kwargs::@NamedTuple{url::String}, kwargs::@Kwargs{}) @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai.jl:458 [13] aiembed(doc_or_docs::SubArray{SubString{String}, 1, Vector{SubString{String}}, Tuple{UnitRange{Int64}}, true}, args::Function; model::String, kwargs::@Kwargs{verbose::Bool, api_kwargs::@NamedTuple{url::String}}) @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/llm_interface.jl:516 [14] aiembed @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_interface.jl:513 [inlined] [15] (::RAGTools.var"#118#119"{Bool, String, Base.Threads.Atomic{Float64}, @Kwargs{api_kwargs::@NamedTuple{url::String}}, ProgressMeter.Progress})(docs_chunk::SubArray{SubString{String}, 1, Vector{SubString{String}}, Tuple{UnitRange{Int64}}, true}) @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/preparation.jl:278 [16] (::Base.var"#1160#1165"{RAGTools.var"#118#119"{Bool, String, Base.Threads.Atomic{Float64}, @Kwargs{api_kwargs::@NamedTuple{url::String}}, ProgressMeter.Progress}})(r::Base.RefValue{Any}, args::Tuple{SubArray{SubString{String}, 1, Vector{SubString{String}}, Tuple{UnitRange{Int64}}, true}}) @ Base ./asyncmap.jl:94 [17] (::Base.var"#1176#1177"{Base.var"#1160#1165"{RAGTools.var"#118#119"{Bool, String, Base.Threads.Atomic{Float64}, @Kwargs{api_kwargs::@NamedTuple{url::String}}, ProgressMeter.Progress}}, Channel{Any}, Nothing})() @ Base ./asyncmap.jl:228 Stacktrace: [1] (::Base.var"#1170#1172")(x::Task) @ Base ./asyncmap.jl:171 [2] foreach(f::Base.var"#1170#1172", itr::Vector{Any}) @ Base ./abstractarray.jl:3187 [3] maptwice(wrapped_f::Function, chnl::Channel{Any}, worker_tasks::Vector{Any}, c::Base.Iterators.PartitionIterator{Vector{SubString{String}}}) @ Base ./asyncmap.jl:171 [4] wrap_n_exec_twice @ ./asyncmap.jl:147 [inlined] [5] async_usemap(f::RAGTools.var"#118#119"{Bool, String, Base.Threads.Atomic{Float64}, @Kwargs{api_kwargs::@NamedTuple{url::String}}, ProgressMeter.Progress}, c::Base.Iterators.PartitionIterator{Vector{SubString{String}}}; ntasks::Int64, batch_size::Nothing) @ Base ./asyncmap.jl:97 [6] async_usemap @ ./asyncmap.jl:78 [inlined] [7] #asyncmap#1154 @ ./asyncmap.jl:75 [inlined] [8] asyncmap @ ./asyncmap.jl:74 [inlined] [9] get_embeddings(embedder::BatchEmbedder, docs::Vector{SubString{String}}; verbose::Bool, model::String, truncate_dimension::Nothing, cost_tracker::Base.Threads.Atomic{Float64}, target_batch_size_length::Int64, ntasks::Int64, kwargs::@Kwargs{api_kwargs::@NamedTuple{url::String}}) @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/preparation.jl:276 [10] get_embeddings @ ~/.julia/packages/RAGTools/5MMaT/src/preparation.jl:258 [inlined] [11] build_index(indexer::SimpleIndexer, files_or_docs::Vector{String}; verbose::Int64, extras::Nothing, index_id::Symbol, chunker::FileChunker, chunker_kwargs::@NamedTuple{max_length::Int64}, embedder::BatchEmbedder, embedder_kwargs::@NamedTuple{model::String}, tagger::NoTagger, tagger_kwargs::@NamedTuple{model::String}, api_kwargs::@NamedTuple{url::String}, cost_tracker::Base.Threads.Atomic{Float64}) @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/preparation.jl:681 [12] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/preparation.jl:342 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [14] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/preparation.jl:287 [15] include(fname::String) @ Main ./sysimg.jl:38 [16] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:19 [inlined] [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [18] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:17 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [20] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:13 [21] include(fname::String) @ Main ./sysimg.jl:38 [22] top-level scope @ none:6 [23] eval @ ./boot.jl:430 [inlined] [24] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [25] _start() @ Base ./client.jl:531 ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Tokens: 3 in 0.0 seconds [ Info: Tokens: 3 in 0.0 seconds [ Info: Tokens: 3 in 0.0 seconds ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Tokens: 3 in 0.0 seconds ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Tokens: 3 in 0.0 seconds ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Tokens: 3 in 0.0 seconds ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Ranking chunks in positions 1 to 2 [ Info: Tokens: 3 in 0.0 seconds [ Info: Ranking chunks in positions 1 to 3 [ Info: Tokens: 3 in 0.0 seconds [ Info: Ranking chunks in positions 2 to 4 [ Info: Tokens: 3 in 0.0 seconds ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Ranking chunks in positions 1 to 3 [ Info: Tokens: 3 in 0.0 seconds ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Ranking chunks in positions 1 to 3 [ Info: Tokens: 3 in 0.0 seconds ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Ranking chunks in positions 1 to 3 [ Info: Tokens: 3 in 0.0 seconds ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Round 1 of 1 of ranking process. [ Info: Final ranking done. Tokens: 3, Cost: 0.0, Time: 0.0s [ Info: Round 1 of 1 of ranking process. [ Info: Final ranking done. Tokens: 3, Cost: 0.0, Time: 0.0s [ Info: Round 1 of 1 of ranking process. [ Info: Final ranking done. Tokens: 3, Cost: 0.0, Time: 0.0s [ Info: Round 1 of 1 of ranking process. [ Info: Final ranking done. Tokens: 3, Cost: 0.0, Time: 0.0s ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Round 1 of 1 of ranking process. [ Info: Final ranking done. Tokens: 3, Cost: 0.0, Time: 0.0s ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Round 1 of 1 of ranking process. [ Info: Final ranking done. Tokens: 3, Cost: 0.0, Time: 0.0s ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Round 1 of 1 of ranking process. [ Info: Final ranking done. Tokens: 3, Cost: 0.0, Time: 0.0s ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Tokens: 3 in 0.0 seconds [ Info: Tokens: 3 in 0.0 seconds ┌ Warning: BM25: `max_score` is zero, so scores are not normalized. Returning unnormalized scores (all zero). └ @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/bm25.jl:188 ┌ Warning: BM25: `max_score` is zero, so scores are not normalized. Returning unnormalized scores (all zero). └ @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/bm25.jl:188 ┌ Warning: Model `mock-emb` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 ┌ Warning: Model `mock-meta` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 retrieve: Error During Test at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/retrieval.jl:773 Got exception outside of a @test ArgumentError: api_key cannot be empty Stacktrace: [1] auth_header(::OpenAI.OpenAIProvider, api_key::String) @ OpenAI ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:40 [2] auth_header @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:19 [inlined] [3] _request(api::String, provider::PromptingTools.CustomProvider, api_key::String; method::String, query::Nothing, http_kwargs::@NamedTuple{retry_non_idempotent::Bool, retries::Int64, readtimeout::Int64}, streamcallback::Nothing, additional_headers::Vector{Pair{String, String}}, kwargs::@Kwargs{model::String, input::SubArray{String, 1, Vector{String}, Tuple{UnitRange{Int64}}, true}}) @ OpenAI ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:158 [4] _request (repeats 2 times) @ ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:140 [inlined] [5] #openai_request#15 @ ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:219 [inlined] [6] openai_request @ ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:213 [inlined] [7] #create_embeddings#300 @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:470 [inlined] [8] create_embeddings @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:465 [inlined] [9] #create_embeddings#291 @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:342 [inlined] [10] create_embeddings @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:333 [inlined] [11] macro expansion @ ./timing.jl:421 [inlined] [12] aiembed(prompt_schema::PromptingTools.CustomOpenAISchema, doc_or_docs::SubArray{String, 1, Vector{String}, Tuple{UnitRange{Int64}}, true}, postprocess::typeof(normalize); verbose::Bool, api_key::String, model::String, http_kwargs::@NamedTuple{retry_non_idempotent::Bool, retries::Int64, readtimeout::Int64}, api_kwargs::@NamedTuple{url::String}, kwargs::@Kwargs{}) @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai.jl:458 [13] aiembed(doc_or_docs::SubArray{String, 1, Vector{String}, Tuple{UnitRange{Int64}}, true}, args::Function; model::String, kwargs::@Kwargs{verbose::Bool, api_kwargs::@NamedTuple{url::String}}) @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/llm_interface.jl:516 [14] aiembed @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_interface.jl:513 [inlined] [15] (::RAGTools.var"#118#119"{Bool, String, Base.Threads.Atomic{Float64}, @Kwargs{api_kwargs::@NamedTuple{url::String}}, ProgressMeter.Progress})(docs_chunk::SubArray{String, 1, Vector{String}, Tuple{UnitRange{Int64}}, true}) @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/preparation.jl:278 [16] (::Base.var"#1160#1165"{RAGTools.var"#118#119"{Bool, String, Base.Threads.Atomic{Float64}, @Kwargs{api_kwargs::@NamedTuple{url::String}}, ProgressMeter.Progress}})(r::Base.RefValue{Any}, args::Tuple{SubArray{String, 1, Vector{String}, Tuple{UnitRange{Int64}}, true}}) @ Base ./asyncmap.jl:94 [17] (::Base.var"#1176#1177"{Base.var"#1160#1165"{RAGTools.var"#118#119"{Bool, String, Base.Threads.Atomic{Float64}, @Kwargs{api_kwargs::@NamedTuple{url::String}}, ProgressMeter.Progress}}, Channel{Any}, Nothing})() @ Base ./asyncmap.jl:228 Stacktrace: [1] (::Base.var"#1170#1172")(x::Task) @ Base ./asyncmap.jl:171 [2] foreach(f::Base.var"#1170#1172", itr::Vector{Any}) @ Base ./abstractarray.jl:3187 [3] maptwice(wrapped_f::Function, chnl::Channel{Any}, worker_tasks::Vector{Any}, c::Base.Iterators.PartitionIterator{Vector{String}}) @ Base ./asyncmap.jl:171 [4] wrap_n_exec_twice @ ./asyncmap.jl:147 [inlined] [5] async_usemap(f::RAGTools.var"#118#119"{Bool, String, Base.Threads.Atomic{Float64}, @Kwargs{api_kwargs::@NamedTuple{url::String}}, ProgressMeter.Progress}, c::Base.Iterators.PartitionIterator{Vector{String}}; ntasks::Int64, batch_size::Nothing) @ Base ./asyncmap.jl:97 [6] async_usemap @ ./asyncmap.jl:78 [inlined] [7] #asyncmap#1154 @ ./asyncmap.jl:75 [inlined] [8] asyncmap @ ./asyncmap.jl:74 [inlined] [9] get_embeddings(embedder::BatchEmbedder, docs::Vector{String}; verbose::Bool, model::String, truncate_dimension::Nothing, cost_tracker::Base.Threads.Atomic{Float64}, target_batch_size_length::Int64, ntasks::Int64, kwargs::@Kwargs{api_kwargs::@NamedTuple{url::String}}) @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/preparation.jl:276 [10] get_embeddings @ ~/.julia/packages/RAGTools/5MMaT/src/preparation.jl:258 [inlined] [11] retrieve(retriever::SimpleRetriever, index::ChunkEmbeddingsIndex{String, Matrix{Float32}, Nothing, Nothing}, question::String; verbose::Int64, top_k::Int64, top_n::Int64, api_kwargs::@NamedTuple{url::String}, rephraser::NoRephraser, rephraser_kwargs::@NamedTuple{model::String}, embedder::BatchEmbedder, embedder_kwargs::@NamedTuple{model::String}, processor::NoProcessor, processor_kwargs::@NamedTuple{}, finder::CosineSimilarity, finder_kwargs::@NamedTuple{}, tagger::NoTagger, tagger_kwargs::@NamedTuple{model::String}, filter::NoTagFilter, filter_kwargs::@NamedTuple{}, reranker::NoReranker, reranker_kwargs::@NamedTuple{}, cost_tracker::Base.Threads.Atomic{Float64}, kwargs::@Kwargs{}) @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/retrieval.jl:1186 [12] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/retrieval.jl:840 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [14] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/retrieval.jl:775 [15] include(fname::String) @ Main ./sysimg.jl:38 [16] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:21 [inlined] [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [18] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:17 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [20] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:13 [21] include(fname::String) @ Main ./sysimg.jl:38 [22] top-level scope @ none:6 [23] eval @ ./boot.jl:430 [inlined] [24] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [25] _start() @ Base ./client.jl:531 ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Done generating the answer. Cost: $0.0 ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 [ Info: Done refining the answer. Cost: $0.0 ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 ┌ Warning: Model `mock-emb` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 ┌ Warning: Model `mock-meta` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 airag: Error During Test at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/generation.jl:213 Got exception outside of a @test ArgumentError: api_key cannot be empty Stacktrace: [1] auth_header(::OpenAI.OpenAIProvider, api_key::String) @ OpenAI ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:40 [2] auth_header @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:19 [inlined] [3] _request(api::String, provider::PromptingTools.CustomProvider, api_key::String; method::String, query::Nothing, http_kwargs::@NamedTuple{retry_non_idempotent::Bool, retries::Int64, readtimeout::Int64}, streamcallback::Nothing, additional_headers::Vector{Pair{String, String}}, kwargs::@Kwargs{model::String, input::Vector{String}}) @ OpenAI ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:158 [4] _request (repeats 2 times) @ ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:140 [inlined] [5] #openai_request#15 @ ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:219 [inlined] [6] openai_request @ ~/.julia/packages/OpenAI/eRtbq/src/OpenAI.jl:213 [inlined] [7] #create_embeddings#300 @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:470 [inlined] [8] create_embeddings @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:465 [inlined] [9] #create_embeddings#291 @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:342 [inlined] [10] create_embeddings @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai_schema_defs.jl:333 [inlined] [11] macro expansion @ ./timing.jl:421 [inlined] [12] aiembed(prompt_schema::PromptingTools.CustomOpenAISchema, doc_or_docs::Vector{String}, postprocess::typeof(identity); verbose::Bool, api_key::String, model::String, http_kwargs::@NamedTuple{retry_non_idempotent::Bool, retries::Int64, readtimeout::Int64}, api_kwargs::@NamedTuple{url::String}, kwargs::@Kwargs{}) @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai.jl:458 [13] aiembed @ ~/.julia/packages/PromptingTools/wvgCI/src/llm_openai.jl:445 [inlined] [14] aiembed(::Vector{String}; model::String, kwargs::@Kwargs{api_kwargs::@NamedTuple{url::String}}) @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/llm_interface.jl:516 [15] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/generation.jl:270 [inlined] [16] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [17] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/generation.jl:215 [18] include(fname::String) @ Main ./sysimg.jl:38 [19] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:22 [inlined] [20] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [21] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:17 [inlined] [22] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [23] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:13 [24] include(fname::String) @ Main ./sysimg.jl:38 [25] top-level scope @ none:6 [26] eval @ ./boot.jl:430 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [28] _start() @ Base ./client.jl:531 WARNING: Method definition (::Type{Main.Random123Annotater})() in module Main at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/annotation.jl:127 overwritten at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/annotation.jl:184. WARNING: Method definition (::Type{Main.Random123Annotater})() in module Main at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/annotation.jl:184 overwritten at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/annotation.jl:271. WARNING: Method definition (::Type{Main.Random123AnnotatedNode})() in module Main at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/annotation.jl:52 overwritten at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/annotation.jl:272. WARNING: Method definition (::Type{Main.Random123Annotater})() in module Main at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/annotation.jl:271 overwritten at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/annotation.jl:353. ┌ Warning: Model `mock-emb` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 ┌ Warning: Model `mock-meta` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 ┌ Warning: Model `mock-gen` already registered! It will be overwritten. └ @ PromptingTools ~/.julia/packages/PromptingTools/wvgCI/src/user_preferences.jl:367 ┌ Warning: ArgumentError("api_key cannot be empty") └ @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/evaluation.jl:123 ┌ Warning: ArgumentError("api_key cannot be empty") └ @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/evaluation.jl:123 ┌ Warning: ArgumentError("api_key cannot be empty") └ @ RAGTools ~/.julia/packages/RAGTools/5MMaT/src/evaluation.jl:123 [ Info: Q&A Sets built! (cost: $0.0) build_qa_evals: Test Failed at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/evaluation.jl:177 Expression: length(qa_evals) == length(chunks(index)) Evaluated: 0 == 3 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined] [2] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/evaluation.jl:177 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [4] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/evaluation.jl:79 build_qa_evals: Test Failed at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/evaluation.jl:179 Expression: all(getproperty.(qa_evals, :context) == ["a", "b", "c"]) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined] [2] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/evaluation.jl:179 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [4] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/evaluation.jl:79 build_qa_evals: Error During Test at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/evaluation.jl:77 Got exception outside of a @test BoundsError: attempt to access 0-element Vector{QAEvalItem} at index [1] Stacktrace: [1] throw_boundserror(A::Vector{QAEvalItem}, I::Tuple{Int64}) @ Base ./essentials.jl:14 [2] getindex(A::Vector{QAEvalItem}, i::Int64) @ Base ./essentials.jl:916 [3] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/evaluation.jl:197 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [5] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/evaluation.jl:79 [6] include(fname::String) @ Main ./sysimg.jl:38 [7] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:24 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [9] macro expansion @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:17 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [11] top-level scope @ ~/.julia/packages/RAGTools/5MMaT/test/runtests.jl:13 [12] include(fname::String) @ Main ./sysimg.jl:38 [13] top-level scope @ none:6 [14] eval @ ./boot.jl:430 [inlined] [15] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [16] _start() @ Base ./client.jl:531 Test Summary: | Pass Fail Error Total Time RAGTools.jl | 1041 2 4 1047 7m47.3s Code quality (Aqua.jl) | 11 11 2m20.7s Core | 1030 2 4 1036 5m26.6s _check_aiextract_capability | 2 2 0.2s vcat_labeled_matrices | 29 29 16.5s hcat_labeled_matrices | 10 10 4.8s hcat_truncate | 26 26 14.5s tokenize | 9 9 0.2s trigrams | 8 8 0.1s trigrams_hashed | 8 8 0.9s token_with_boundaries | 8 8 0.1s text_to_trigrams | 7 7 0.5s text_to_trigrams_hashed | 7 7 0.6s split_into_code_and_sentences | 9 9 0.3s getpropertynested | 8 8 0.8s setpropertynested | 5 5 2.3s merge_kwargs_nested | 6 6 1.4s pack_bits,unpack_bits | 15 15 0.3s preprocess_tokens | 11 11 1.0s reciprocal_rank_fusion | 43 43 3.5s score_to_unit_scale | 6 6 1.4s ChunkEmbeddingsIndex | 30 30 3.8s ChunkKeywordsIndex | 23 23 9.5s DocumentTermMatrix | 55 55 11.8s MultiIndex | 15 15 1.6s CandidateChunks | 26 26 4.0s MultiCandidateChunks | 22 22 3.8s SubChunkIndex | 99 99 14.7s getindex-CandidateChunks | 38 38 6.4s getindex-MultiCandidateChunks | 23 23 0.3s RAGResult | 15 15 14.4s load_text | 5 5 0.1s get_chunks | 6 6 1.2s get_embeddings | 13 13 14.2s get_keywords | 19 19 2.2s tags_extract | 9 9 0.3s get_tags | 5 5 24.5s build_tags | 15 15 2.2s build_index | 1 1 7.9s RankGPTResult | 19 19 0.6s create_permutation_instruction | 20 20 0.4s extract_ranking | 10 10 0.9s receive_permutation! | 10 10 0.5s permutation_step! | 6 6 4.3s rank_sliding_window! | 9 9 0.5s rank_gpt | 11 11 0.3s rephrase | 4 4 1.7s hamming_distance | 21 21 1.5s bm25 | 28 28 4.3s find_closest | 28 28 25.5s find_closest-MultiIndex | 30 30 5.3s find_tags | 34 34 13.2s reciprocal_rank_fusion | 22 22 4.3s rerank | 9 9 0.9s retrieve | 1 1 13.0s build_context! | 7 7 1.5s answer! | 3 3 1.7s refine! | 5 5 1.8s postprocess! | 2 2 0.0s generate! | 6 6 2.2s airag | 1 1 1.0s AnnotatedNode | 19 19 0.4s AnnotatedNode-pprint | 3 3 0.3s set_node_style! | 15 15 0.3s align_node_styles! | 7 7 0.3s trigram_support! | 11 11 0.6s add_node_metadata! | 10 10 0.6s annotate_support | 19 19 0.7s print_html | 6 6 2.0s QAEvalItem | 2 2 0.1s Base.show,JSON3.write | 6 6 42.1s score_retrieval_hit,score_retrieval_rank | 8 8 2.0s build_qa_evals | 5 2 1 8 14.0s ERROR: LoadError: Some tests did not pass: 1041 passed, 2 failed, 4 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/RAGTools/5MMaT/test/runtests.jl:12 Testing failed after 513.43s ERROR: LoadError: Package RAGTools errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2124 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 679.33s: package tests unexpectedly errored