Package evaluation of ProteinSecondaryStructures on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T08:34:51.180 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.52s ################################################################################ # Installation # Installing ProteinSecondaryStructures... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [c298f58b] + ProteinSecondaryStructures v2.0.3 Updating `~/.julia/environments/v1.11/Manifest.toml` [692b3bcd] + JLLWrappers v1.7.0 [21216c6a] + Preferences v1.4.3 [c298f58b] + ProteinSecondaryStructures v2.0.3 [1c621080] + TestItems v1.0.0 [74334e00] + DSSP_jll v4.4.0+1 [850473c1] + STRIDE_jll v1.0.0+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [de0858da] + Printf v1.11.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [83775a58] + Zlib_jll v1.2.13+1 Installation completed after 4.09s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 20.59s ################################################################################ # Testing # Testing ProteinSecondaryStructures Status `/tmp/jl_iPNM1d/Project.toml` ⌅ [4c88cf16] Aqua v0.6.7 [c298f58b] ProteinSecondaryStructures v2.0.3 [f8b46487] TestItemRunner v1.1.0 [1c621080] TestItems v1.0.0 [74334e00] DSSP_jll v4.4.0+1 [850473c1] STRIDE_jll v1.0.0+0 [8dfed614] Test v1.11.0 Status `/tmp/jl_iPNM1d/Manifest.toml` ⌅ [4c88cf16] Aqua v0.6.7 [34da2185] Compat v4.16.0 [692b3bcd] JLLWrappers v1.7.0 [21216c6a] Preferences v1.4.3 [c298f58b] ProteinSecondaryStructures v2.0.3 [f8b46487] TestItemRunner v1.1.0 [1c621080] TestItems v1.0.0 [74334e00] DSSP_jll v4.4.0+1 [850473c1] STRIDE_jll v1.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [83775a58] Zlib_jll v1.2.13+1 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Skipping Base.active_repl Skipping Base.active_repl_backend Skipping Base.cwstring IGNORED /tmp/jl_RMdKtA3Ejg.pdb A (less than 5 residues) No valid chain in /tmp/jl_RMdKtA3Ejg.pdb Test Summary: | Pass Total Time Package | 29 29 37.7s Testing ProteinSecondaryStructures tests passed Testing completed after 99.31s PkgEval succeeded after 138.91s