Package evaluation of PrincipalMomentAnalysisApp on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T17:26:18.565


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.86s


################################################################################
# Installation
#

Installing PrincipalMomentAnalysisApp...
   Resolving package versions...
   Installed PlotlyJS ─ v0.18.15
   Installed WebIO ──── v0.8.21
    Updating `~/.julia/environments/v1.11/Project.toml`
  [e56c3062] + PrincipalMomentAnalysisApp v0.2.6
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [bf4720bc] + AssetRegistry v0.1.0
  [d1d4a3ce] + BitFlags v0.1.9
  [ad839575] + Blink v0.12.9
  [336ed68f] + CSV v0.10.15
  [944b1d66] + CodecZlib v0.7.8
  [35d6a980] + ColorSchemes v3.29.0
⌅ [3da002f7] + ColorTypes v0.11.5
⌃ [c3611d14] + ColorVectorSpace v0.10.0
⌅ [5ae59095] + Colors v0.12.11
  [34da2185] + Compat v4.16.0
  [f0e56b4a] + ConcurrentUtilities v2.5.0
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.7.0
  [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [8bb1440f] + DelimitedFiles v1.9.1
  [b4f34e82] + Distances v0.10.12
  [ffbed154] + DocStringExtensions v0.9.4
  [460bff9d] + ExceptionUnwrapping v0.1.11
  [48062228] + FilePathsBase v0.9.24
  [53c48c17] + FixedPointNumbers v0.8.5
  [de31a74c] + FunctionalCollections v0.5.0
  [cd3eb016] + HTTP v1.10.15
  [9fb69e20] + Hiccup v0.2.2
  [842dd82b] + InlineStrings v1.4.3
  [41ab1584] + InvertedIndices v1.3.1
  [c8e1da08] + IterTools v1.10.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [97c1335a] + JSExpr v0.5.4
  [682c06a0] + JSON v0.21.4
  [b964fa9f] + LaTeXStrings v1.4.0
  [50d2b5c4] + Lazy v0.15.1
  [e6f89c97] + LoggingExtras v1.1.0
  [1914dd2f] + MacroTools v0.5.15
  [739be429] + MbedTLS v1.1.9
  [e1d29d7a] + Missings v1.2.0
  [ffc61752] + Mustache v1.0.20
  [a975b10e] + Mux v1.0.2
  [b8a86587] + NearestNeighbors v0.4.21
  [510215fc] + Observables v0.5.5
  [4d8831e6] + OpenSSL v1.4.3
  [bac558e1] + OrderedCollections v1.8.0
  [d96e819e] + Parameters v0.12.3
  [69de0a69] + Parsers v2.8.1
  [fa939f87] + Pidfile v1.3.0
  [a03496cd] + PlotlyBase v0.8.20
  [f0f68f2c] + PlotlyJS v0.18.15
  [f2990250] + PlotlyKaleido v2.3.0
  [2dfb63ee] + PooledArrays v1.4.3
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [08abe8d2] + PrettyTables v2.4.0
  [6a3ba550] + PrincipalMomentAnalysis v0.2.2
  [e56c3062] + PrincipalMomentAnalysisApp v0.2.6
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [91c51154] + SentinelArrays v1.4.8
  [777ac1f9] + SimpleBufferStream v1.2.0
  [a2af1166] + SortingAlgorithms v1.2.1
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.0
  [892a3eda] + StringManipulation v0.4.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [62fd8b95] + TensorCore v0.1.1
  [3bb67fe8] + TranscodingStreams v0.11.3
  [5c2747f8] + URIs v1.5.2
  [3a884ed6] + UnPack v1.0.2
  [ea10d353] + WeakRefStrings v1.4.2
  [0f1e0344] + WebIO v0.8.21
  [104b5d7c] + WebSockets v1.6.0
  [cc8bc4a8] + Widgets v0.6.7
  [76eceee3] + WorkerUtilities v1.6.1
  [f7e6163d] + Kaleido_jll v0.2.1+0
  [458c3c95] + OpenSSL_jll v3.0.16+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.11.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.6.0+0
  [e37daf67] + LibGit2_jll v1.7.2+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.6+0
  [14a3606d] + MozillaCACerts_jll v2023.12.12
  [4536629a] + OpenBLAS_jll v0.3.27+1
  [bea87d4a] + SuiteSparse_jll v7.7.0+0
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.59.0+0
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`
    Building WebIO ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0eef0765186f7452e52236fa42ca8c9b3c11c6e3/build.log`
    Building PlotlyJS → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/e415b25fdec06e57590a7d5ac8e0cf662fa317e2/build.log`

Installation completed after 23.99s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 423.32s


################################################################################
# Testing
#

     Testing PrincipalMomentAnalysisApp
      Status `/tmp/jl_enXUZx/Project.toml`
  [ad839575] Blink v0.12.9
  [336ed68f] CSV v0.10.15
⌅ [5ae59095] Colors v0.12.11
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.22
  [c8e1da08] IterTools v1.10.0
  [97c1335a] JSExpr v0.5.4
  [f0f68f2c] PlotlyJS v0.18.15
  [6a3ba550] PrincipalMomentAnalysis v0.2.2
  [e56c3062] PrincipalMomentAnalysisApp v0.2.6
  [10745b16] Statistics v1.11.1
  [37e2e46d] LinearAlgebra v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_enXUZx/Manifest.toml`
  [bf4720bc] AssetRegistry v0.1.0
  [d1d4a3ce] BitFlags v0.1.9
  [ad839575] Blink v0.12.9
  [336ed68f] CSV v0.10.15
  [944b1d66] CodecZlib v0.7.8
  [35d6a980] ColorSchemes v3.29.0
⌅ [3da002f7] ColorTypes v0.11.5
⌃ [c3611d14] ColorVectorSpace v0.10.0
⌅ [5ae59095] Colors v0.12.11
  [34da2185] Compat v4.16.0
  [f0e56b4a] ConcurrentUtilities v2.5.0
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [8bb1440f] DelimitedFiles v1.9.1
  [b4f34e82] Distances v0.10.12
  [ffbed154] DocStringExtensions v0.9.4
  [460bff9d] ExceptionUnwrapping v0.1.11
  [48062228] FilePathsBase v0.9.24
  [53c48c17] FixedPointNumbers v0.8.5
  [de31a74c] FunctionalCollections v0.5.0
  [cd3eb016] HTTP v1.10.15
  [9fb69e20] Hiccup v0.2.2
  [842dd82b] InlineStrings v1.4.3
  [41ab1584] InvertedIndices v1.3.1
  [c8e1da08] IterTools v1.10.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [97c1335a] JSExpr v0.5.4
  [682c06a0] JSON v0.21.4
  [b964fa9f] LaTeXStrings v1.4.0
  [50d2b5c4] Lazy v0.15.1
  [e6f89c97] LoggingExtras v1.1.0
  [1914dd2f] MacroTools v0.5.15
  [739be429] MbedTLS v1.1.9
  [e1d29d7a] Missings v1.2.0
  [ffc61752] Mustache v1.0.20
  [a975b10e] Mux v1.0.2
  [b8a86587] NearestNeighbors v0.4.21
  [510215fc] Observables v0.5.5
  [4d8831e6] OpenSSL v1.4.3
  [bac558e1] OrderedCollections v1.8.0
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.1
  [fa939f87] Pidfile v1.3.0
  [a03496cd] PlotlyBase v0.8.20
  [f0f68f2c] PlotlyJS v0.18.15
  [f2990250] PlotlyKaleido v2.3.0
  [2dfb63ee] PooledArrays v1.4.3
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [08abe8d2] PrettyTables v2.4.0
  [6a3ba550] PrincipalMomentAnalysis v0.2.2
  [e56c3062] PrincipalMomentAnalysisApp v0.2.6
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [91c51154] SentinelArrays v1.4.8
  [777ac1f9] SimpleBufferStream v1.2.0
  [a2af1166] SortingAlgorithms v1.2.1
  [90137ffa] StaticArrays v1.9.13
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
  [892a3eda] StringManipulation v0.4.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [62fd8b95] TensorCore v0.1.1
  [3bb67fe8] TranscodingStreams v0.11.3
  [5c2747f8] URIs v1.5.2
  [3a884ed6] UnPack v1.0.2
  [ea10d353] WeakRefStrings v1.4.2
  [0f1e0344] WebIO v0.8.21
  [104b5d7c] WebSockets v1.6.0
  [cc8bc4a8] Widgets v0.6.7
  [76eceee3] WorkerUtilities v1.6.1
  [f7e6163d] Kaleido_jll v0.2.1+0
  [458c3c95] OpenSSL_jll v3.0.16+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [bea87d4a] SuiteSparse_jll v7.7.0+0
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
[ Info: [Processing] Got message: exit Any[]
[ Info: [Processing] Exiting thread.
[ Info: [Processing] Got message: setvalue Any["samplesimplexmethod", "SA"]
[ Info: [Processing] Got message: setvalue Any["loadrowsassamples", "true"]
[ Info: [Processing] Got message: setvalue Any["logtransform", "false"]
[ Info: [Processing] Got message: setvalue Any["logtransformoffset", "1"]
[ Info: [Processing] Got message: setvalue Any["normalizemethod", "Mean=0"]
[ Info: [Processing] Got message: setvalue Any["dimreductionmethod", "PMA"]
[ Info: [Processing] Got message: setvalue Any["knearestneighbors", "0"]
[ Info: [Processing] Got message: setvalue Any["distnearestneighbors", "0"]
[ Info: [Processing] Got message: setvalue Any["xaxis", "1"]
[ Info: [Processing] Got message: setvalue Any["yaxis", "2"]
[ Info: [Processing] Got message: setvalue Any["zaxis", "3"]
[ Info: [Processing] Got message: setvalue Any["plotwidth", "1024"]
[ Info: [Processing] Got message: setvalue Any["plotheight", "768"]
[ Info: [Processing] Got message: setvalue Any["showpoints", "true"]
[ Info: [Processing] Got message: setvalue Any["showlines", "true"]
[ Info: [Processing] Got message: setvalue Any["showtriangles", "false"]
[ Info: [Processing] Got message: setvalue Any["markersize", "4"]
[ Info: [Processing] Got message: setvalue Any["linewidth", "1"]
[ Info: [Processing] Got message: setvalue Any["triangleopacity", "0.05"]
[ Info: [Processing] Got message: setvalue Any["colorby", "Auto"]
[ Info: [Processing] Got message: setvalue Any["exportmode", "Variables"]
[ Info: [Processing] Got message: setvalue Any["exportsingledim", "1"]
[ Info: [Processing] Got message: setvalue Any["exportsinglesort", "Abs"]
[ Info: [Processing] Got message: setvalue Any["exportmultipledim", "3"]
[ Info: [Processing] Got message: exit Any[]
[ Info: [Processing] Got message: setvalue Any["samplesimplexmethod", "SA"]
[ Info: [Processing] Got message: setvalue Any["loadrowsassamples", "true"]
[ Info: [Processing] Got message: setvalue Any["logtransform", "false"]
[ Info: [Processing] Got message: setvalue Any["logtransformoffset", "1"]
[ Info: [Processing] Got message: setvalue Any["normalizemethod", "Mean=0"]
[ Info: [Processing] Got message: setvalue Any["dimreductionmethod", "PMA"]
[ Info: [Processing] Got message: setvalue Any["knearestneighbors", "0"]
[ Info: [Processing] Got message: setvalue Any["distnearestneighbors", "0"]
[ Info: [Processing] Got message: setvalue Any["xaxis", "1"]
[ Info: [Processing] Got message: setvalue Any["yaxis", "2"]
[ Info: [Processing] Got message: setvalue Any["zaxis", "3"]
[ Info: [Processing] Got message: setvalue Any["plotwidth", "1024"]
[ Info: [Processing] Got message: setvalue Any["plotheight", "768"]
[ Info: [Processing] Got message: setvalue Any["showpoints", "true"]
[ Info: [Processing] Got message: setvalue Any["showlines", "true"]
[ Info: [Processing] Got message: setvalue Any["showtriangles", "false"]
[ Info: [Processing] Got message: setvalue Any["markersize", "4"]
[ Info: [Processing] Got message: setvalue Any["linewidth", "1"]
[ Info: [Processing] Got message: setvalue Any["triangleopacity", "0.05"]
[ Info: [Processing] Got message: setvalue Any["colorby", "Auto"]
[ Info: [Processing] Got message: setvalue Any["exportmode", "Variables"]
[ Info: [Processing] Got message: setvalue Any["exportsingledim", "1"]
[ Info: [Processing] Got message: setvalue Any["exportsinglesort", "Abs"]
[ Info: [Processing] Got message: setvalue Any["exportmultipledim", "3"]
[ Info: [Processing] Got message: setvalue Any["samplefilepath", "/home/pkgeval/.julia/packages/PrincipalMomentAnalysisApp/ZYABW/test/data/data.tsv"]
[ Info: [Processing] Got message: setvalue Any["lastsampleannot", "Time"]
[ Info: [Processing] Got message: loadsample Any[]
[ Info: loadsample waiting for 0 jobs to finish.
[ Info: Spawning loadsample (3@133)
[ Info: Running loadsample (3@133) with 2 parameter(s) in thread 1.
[ Info: Finished running loadsample[33.3s] (3@133) in thread 1.
[ Info: [Processing] Got message: setvalue Any["samplesimplexmethod", "SA"]
[ Info: [Processing] Got message: setvalue Any["sampleannot", "Group"]
[ Info: [Processing] Got message: dimreduction Any[]
[ Info: normalizesample waiting for 0 jobs to finish.
[ Info: setupsimplices waiting for 1 jobs to finish.
[ Info: dimreduction waiting for 2 jobs to finish.
[ Info: Spawning normalizesample (8@135)
[ Info: Running normalizesample (8@135) with 5 parameter(s) in thread 1.
[ Info: Finished running normalizesample[1.9s] (8@135) in thread 1.
[ Info: Spawning setupsimplices (14@138)
[ Info: Running setupsimplices (14@138) with 6 parameter(s) in thread 1.
[ Info: Finished running setupsimplices[2.5s] (14@138) in thread 1.
[ Info: Spawning dimreduction (16@138)
[ Info: Running dimreduction (16@138) with 3 parameter(s) in thread 1.
[ Info: Finished running dimreduction[17.7s] (16@138) in thread 1.
[ Info: [Processing] Got message: setvalue Any["samplesimplexmethod", "Time"]
[ Info: [Processing] Got message: setvalue Any["sampleannot", "Group"]
[ Info: [Processing] Got message: setvalue Any["timeannot", "Time"]
[ Info: [Processing] Got message: dimreduction Any[]
[ Info: setupsimplices waiting for 0 jobs to finish.
[ Info: dimreduction waiting for 1 jobs to finish.
[ Info: Spawning setupsimplices (14@143)
[ Info: Running setupsimplices (14@143) with 6 parameter(s) in thread 1.
[ Info: Finished running setupsimplices[8.1s] (14@143) in thread 1.
[ Info: Spawning dimreduction (16@143)
[ Info: Running dimreduction (16@143) with 3 parameter(s) in thread 1.
[ Info: Finished running dimreduction[0.0s] (16@143) in thread 1.
[ Info: [Processing] Got message: setvalue Any["samplesimplexmethod", "NN"]
[ Info: [Processing] Got message: setvalue Any["knearestneighbors", "2"]
[ Info: [Processing] Got message: setvalue Any["distnearestneighbors", "0.5"]
[ Info: [Processing] Got message: dimreduction Any[]
[ Info: setupsimplices waiting for 0 jobs to finish.
[ Info: dimreduction waiting for 1 jobs to finish.
[ Info: Spawning setupsimplices (14@149)
[ Info: Running setupsimplices (14@149) with 6 parameter(s) in thread 1.
[ Info: Finished running setupsimplices[11.1s] (14@149) in thread 1.
[ Info: Spawning dimreduction (16@149)
[ Info: Running dimreduction (16@149) with 3 parameter(s) in thread 1.
[ Info: Finished running dimreduction[0.7s] (16@149) in thread 1.
[ Info: [Processing] Got message: setvalue Any["samplesimplexmethod", "NNSA"]
[ Info: [Processing] Got message: setvalue Any["sampleannot", "Group"]
[ Info: [Processing] Got message: setvalue Any["knearestneighbors", "2"]
[ Info: [Processing] Got message: setvalue Any["distnearestneighbors", "0.5"]
[ Info: [Processing] Got message: dimreduction Any[]
[ Info: setupsimplices waiting for 0 jobs to finish.
[ Info: dimreduction waiting for 1 jobs to finish.
[ Info: Spawning setupsimplices (14@151)
[ Info: Running setupsimplices (14@151) with 6 parameter(s) in thread 1.
[ Info: Finished running setupsimplices[2.0s] (14@151) in thread 1.
[ Info: Spawning dimreduction (16@151)
[ Info: Running dimreduction (16@151) with 3 parameter(s) in thread 1.
[ Info: Finished running dimreduction[0.0s] (16@151) in thread 1.
[ Info: [Processing] Got message: setvalue Any["exportsingledim", "1"]
[ Info: [Processing] Got message: setvalue Any["exportsinglesort", "Abs"]
[ Info: [Processing] Got message: setvalue Any["exportmode", "Samples"]
[ Info: [Processing] Got message: setvalue Any["exportsinglepath", "/tmp/jl_bYGOqF/PMA1_Samples_Abs.tsv"]
[ Info: [Processing] Got message: exportsingle Any[]
[ Info: exportsingle waiting for 0 jobs to finish.
[ Info: Spawning exportsingle (37@160)
[ Info: Running exportsingle (37@160) with 5 parameter(s) in thread 1.
[ Info: Finished running exportsingle[3.5s] (37@160) in thread 1.
[ Info: [Processing] Got message: setvalue Any["exportsingledim", "3"]
[ Info: [Processing] Got message: setvalue Any["exportsinglesort", "Descending"]
[ Info: [Processing] Got message: setvalue Any["exportmode", "Variables"]
[ Info: [Processing] Got message: setvalue Any["exportsinglepath", "/tmp/jl_bYGOqF/PMA3_Variables_Descending.tsv"]
[ Info: [Processing] Got message: exportsingle Any[]
[ Info: exportsingle waiting for 0 jobs to finish.
[ Info: Spawning exportsingle (37@168)
[ Info: Running exportsingle (37@168) with 5 parameter(s) in thread 1.
[ Info: Finished running exportsingle[1.2s] (37@168) in thread 1.
[ Info: [Processing] Got message: setvalue Any["exportsingledim", "7"]
[ Info: [Processing] Got message: setvalue Any["exportsinglesort", "Ascending"]
[ Info: [Processing] Got message: setvalue Any["exportmode", "Samples"]
[ Info: [Processing] Got message: setvalue Any["exportsinglepath", "/tmp/jl_bYGOqF/PMA7_Samples_Ascending.tsv"]
[ Info: [Processing] Got message: exportsingle Any[]
[ Info: exportsingle waiting for 0 jobs to finish.
[ Info: Spawning exportsingle (37@176)
[ Info: Running exportsingle (37@176) with 5 parameter(s) in thread 1.
[ Info: Finished running exportsingle[0.8s] (37@176) in thread 1.
[ Info: [Processing] Got message: setvalue Any["exportsingledim", "10"]
[ Info: [Processing] Got message: setvalue Any["exportsinglesort", "Original"]
[ Info: [Processing] Got message: setvalue Any["exportmode", "Variables"]
[ Info: [Processing] Got message: setvalue Any["exportsinglepath", "/tmp/jl_bYGOqF/PMA10_Variables_Original.tsv"]
[ Info: [Processing] Got message: exportsingle Any[]
[ Info: exportsingle waiting for 0 jobs to finish.
[ Info: Spawning exportsingle (37@184)
[ Info: Running exportsingle (37@184) with 5 parameter(s) in thread 1.
[ Info: Finished running exportsingle[0.2s] (37@184) in thread 1.
[ Info: [Processing] Got message: setvalue Any["exportmultipledim", "4"]
[ Info: [Processing] Got message: setvalue Any["exportmode", "Samples"]
[ Info: [Processing] Got message: setvalue Any["exportmultiplepath", "/tmp/jl_bYGOqF/PMA4_Samples.csv"]
[ Info: [Processing] Got message: exportmultiple Any[]
[ Info: exportmultiple waiting for 0 jobs to finish.
[ Info: Spawning exportmultiple (41@190)
[ Info: Running exportmultiple (41@190) with 4 parameter(s) in thread 1.
[ Info: Finished running exportmultiple[0.3s] (41@190) in thread 1.
[ Info: [Processing] Got message: setvalue Any["exportmultipledim", "5"]
[ Info: [Processing] Got message: setvalue Any["exportmode", "Variables"]
[ Info: [Processing] Got message: setvalue Any["exportmultiplepath", "/tmp/jl_bYGOqF/PMA5_Variables.csv"]
[ Info: [Processing] Got message: exportmultiple Any[]
[ Info: exportmultiple waiting for 0 jobs to finish.
[ Info: Spawning exportmultiple (41@196)
[ Info: Running exportmultiple (41@196) with 4 parameter(s) in thread 1.
[ Info: Finished running exportmultiple[0.3s] (41@196) in thread 1.
[ Info: [Processing] Got message: exit Any[]
[ Info: [Processing] Got message: setvalue Any["samplesimplexmethod", "SA"]
[ Info: [Processing] Got message: setvalue Any["loadrowsassamples", "true"]
[ Info: [Processing] Got message: setvalue Any["logtransform", "false"]
[ Info: [Processing] Got message: setvalue Any["logtransformoffset", "1"]
[ Info: [Processing] Got message: setvalue Any["normalizemethod", "Mean=0"]
[ Info: [Processing] Got message: setvalue Any["dimreductionmethod", "PMA"]
[ Info: [Processing] Got message: setvalue Any["knearestneighbors", "0"]
[ Info: [Processing] Got message: setvalue Any["distnearestneighbors", "0"]
[ Info: [Processing] Got message: setvalue Any["xaxis", "1"]
[ Info: [Processing] Got message: setvalue Any["yaxis", "2"]
[ Info: [Processing] Got message: setvalue Any["zaxis", "3"]
[ Info: [Processing] Got message: setvalue Any["plotwidth", "1024"]
[ Info: [Processing] Got message: setvalue Any["plotheight", "768"]
[ Info: [Processing] Got message: setvalue Any["showpoints", "true"]
[ Info: [Processing] Got message: setvalue Any["showlines", "true"]
[ Info: [Processing] Got message: setvalue Any["showtriangles", "false"]
[ Info: [Processing] Got message: setvalue Any["markersize", "4"]
[ Info: [Processing] Got message: setvalue Any["linewidth", "1"]
[ Info: [Processing] Got message: setvalue Any["triangleopacity", "0.05"]
[ Info: [Processing] Got message: setvalue Any["colorby", "Auto"]
[ Info: [Processing] Got message: setvalue Any["exportmode", "Variables"]
[ Info: [Processing] Got message: setvalue Any["exportsingledim", "1"]
[ Info: [Processing] Got message: setvalue Any["exportsinglesort", "Abs"]
[ Info: [Processing] Got message: setvalue Any["exportmultipledim", "3"]
[ Info: [Processing] Got message: setvalue Any["samplefilepath", "/home/pkgeval/.julia/packages/PrincipalMomentAnalysisApp/ZYABW/test/data/data_missing.tsv"]
[ Info: [Processing] Got message: setvalue Any["lastsampleannot", "Time"]
[ Info: [Processing] Got message: setvalue Any["normalizemethod", "None"]
[ Info: [Processing] Got message: normalize Any[]
[ Info: loadsample waiting for 0 jobs to finish.
[ Info: normalizesample waiting for 1 jobs to finish.
[ Info: Spawning loadsample (3@133)
[ Info: Running loadsample (3@133) with 2 parameter(s) in thread 1.
[ Info: Finished running loadsample[0.3s] (3@133) in thread 1.
[ Info: Spawning normalizesample (8@137)
[ Info: Running normalizesample (8@137) with 5 parameter(s) in thread 1.
[ Info: Reconstructing missing values (taking the mean over all nonmissing samples)
[ Info: Finished running normalizesample[3.1s] (8@137) in thread 1.
[ Info: [Processing] Got message: setvalue Any["logtransform", "true"]
[ Info: [Processing] Got message: setvalue Any["logtransformoffset", "0.57"]
[ Info: [Processing] Got message: normalize Any[]
[ Info: normalizesample waiting for 0 jobs to finish.
[ Info: Spawning normalizesample (8@141)
[ Info: Running normalizesample (8@141) with 5 parameter(s) in thread 1.
[ Info: Reconstructing missing values (taking the mean over all nonmissing samples)
[ Info: Finished running normalizesample[0.8s] (8@141) in thread 1.
Test Summary:              | Pass  Total     Time
PrincipalMomentAnalysisApp |   83     83  2m50.0s
     Testing PrincipalMomentAnalysisApp tests passed 

Testing completed after 203.36s

PkgEval succeeded after 807.12s