Package evaluation of PortHamiltonianBenchmarkSystems on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T14:45:38.518 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.21s ################################################################################ # Installation # Installing PortHamiltonianBenchmarkSystems... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [a30e1a9a] + PortHamiltonianBenchmarkSystems v0.1.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [4c555306] + ArrayLayouts v1.11.1 ⌅ [8e7c35d0] + BlockArrays v0.16.43 [e1450e63] + BufferedStreams v1.2.2 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.16.0 [ffbed154] + DocStringExtensions v0.9.4 ⌅ [e30172f5] + Documenter v0.27.25 [1a297f60] + FillArrays v1.13.0 [f67ccb44] + HDF5 v0.17.2 [b5f81e59] + IOCapture v0.2.5 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [69de0a69] + Parsers v2.8.1 [a30e1a9a] + PortHamiltonianBenchmarkSystems v0.1.0 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [ae029012] + Requires v1.3.1 [3bb67fe8] + TranscodingStreams v0.11.3 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.0+0 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+2 [458c3c95] + OpenSSL_jll v3.0.16+0 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.13s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 26.64s ################################################################################ # Testing # Testing PortHamiltonianBenchmarkSystems Status `/tmp/jl_HSakF1/Project.toml` ⌅ [8e7c35d0] BlockArrays v0.16.43 ⌅ [e30172f5] Documenter v0.27.25 [c8e1da08] IterTools v1.10.0 [23992714] MAT v0.10.7 [a30e1a9a] PortHamiltonianBenchmarkSystems v0.1.0 [4af54fe1] LazyArtifacts v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [2f01184e] SparseArrays v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_HSakF1/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [4c555306] ArrayLayouts v1.11.1 ⌅ [8e7c35d0] BlockArrays v0.16.43 [e1450e63] BufferedStreams v1.2.2 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.16.0 [ffbed154] DocStringExtensions v0.9.4 ⌅ [e30172f5] Documenter v0.27.25 [1a297f60] FillArrays v1.13.0 [f67ccb44] HDF5 v0.17.2 [b5f81e59] IOCapture v0.2.5 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [23992714] MAT v0.10.7 [3da0fdf6] MPIPreferences v0.1.11 [69de0a69] Parsers v2.8.1 [a30e1a9a] PortHamiltonianBenchmarkSystems v0.1.0 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [ae029012] Requires v1.3.1 [3bb67fe8] TranscodingStreams v0.11.3 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.0+0 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+2 [458c3c95] OpenSSL_jll v3.0.16+0 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 143 running 1 of 1 signal (10): User defined signal 1 unknown function (ip: 0x7589fa779b6a) memmove at ./cmem.jl:28 [inlined] unsafe_copyto! at ./genericmemory.jl:121 [inlined] unsafe_copyto! at ./genericmemory.jl:139 [inlined] _growat! at ./array.jl:1168 insert! at ./array.jl:1746 [inlined] _insert! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/sparsematrix.jl:3218 [inlined] _setindex_scalar! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/sparsematrix.jl:3207 setindex! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/sparsematrix.jl:3180 [inlined] setindex! at ./subarray.jl:372 [inlined] transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:123 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transpose_f! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:114 adjoint! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:76 [inlined] copyto_unaliased! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:252 [inlined] copyto! at ./abstractarray.jl:1061 [inlined] copyto! at ./broadcast.jl:966 [inlined] copyto! at ./broadcast.jl:925 [inlined] materialize! at ./broadcast.jl:883 [inlined] materialize! at ./broadcast.jl:880 [inlined] construct_system at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/zcCOH/src/DampedWaveNet.jl:166 macro expansion at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/zcCOH/test/DampedWaveNetTests.jl:26 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] top-level scope at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/zcCOH/test/DampedWaveNetTests.jl:2 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_invoke at /source/src/gf.c:2955 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x7589f9300082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x7589f9300082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7589fa64e249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x7ed4a1764f82) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2142 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2082 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x7ed4a175d71d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1837 unknown function (ip: 0x7ed4a1751cea) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x7ed4a17519ed) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x7ed4a17513dd) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x7ed4a174d886) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7ed4a2a12249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x00007ed495400010 Total snapshots: 148. Utilization: 0% ╎148 @Base/client.jl:531; _start() ╎ 148 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 148 @Base/Base.jl:557; include(mod::Module, _path::String) ╎ 148 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _pat… ╎ 148 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mo… ╎ 148 @Base/boot.jl:430; eval ╎ ╎ 148 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 148 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 148 @Pkg/src/API.jl:147; test ╎ ╎ 148 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 148 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 148 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec… ╎ ╎ ╎ 148 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 148 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 148 …rc/Operations.jl:2007; test ╎ ╎ ╎ 148 …rc/Operations.jl:2063; test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 148 …c/Operations.jl:1837; kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 148 …c/Operations.jl:1845; #sandbox#115 ╎ ╎ ╎ ╎ 148 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 148 @Base/file.jl:815; mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 148 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 148 …Operations.jl:1898; (::Pkg.Operations.var"#116#12… ╎ ╎ ╎ ╎ ╎ 148 …Operations.jl:1789; with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 148 …Operations.jl:1931; (::Pkg.Operations.var"#118#… ╎ ╎ ╎ ╎ ╎ 148 @Base/env.jl:265; withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 148 …perations.jl:2082; (::Pkg.Operations.var"#131… ╎ ╎ ╎ ╎ ╎ ╎ 148 …erations.jl:2142; subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 148 …/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 148 …/process.jl:694; wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 148 …ondition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 148 …ondition.jl:130; wait(c::Base.GenericCon… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 148 …ase/task.jl:1021; wait() 147╎ ╎ ╎ ╎ ╎ ╎ ╎ 148 …ase/task.jl:1012; poptask(W::Base.Intr… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 [143] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/zcCOH/test/DampedWaveNetTests.jl:1 unknown function (ip: 0x7589fa779b65) memmove at ./cmem.jl:28 [inlined] unsafe_copyto! at ./genericmemory.jl:121 [inlined] unsafe_copyto! at ./genericmemory.jl:139 [inlined] _growat! at ./array.jl:1168 insert! at ./array.jl:1746 [inlined] _insert! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/sparsematrix.jl:3218 [inlined] _setindex_scalar! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/sparsematrix.jl:3206 setindex! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/sparsematrix.jl:3180 [inlined] setindex! at ./subarray.jl:372 [inlined] transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:123 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:129 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:134 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:130 transposeblock! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:133 transpose_f! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:114 adjoint! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:76 [inlined] copyto_unaliased! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/transpose.jl:252 [inlined] copyto! at ./abstractarray.jl:1061 [inlined] copyto! at ./broadcast.jl:966 [inlined] copyto! at ./broadcast.jl:925 [inlined] materialize! at ./broadcast.jl:883 [inlined] materialize! at ./broadcast.jl:880 [inlined] construct_system at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/zcCOH/src/DampedWaveNet.jl:166 macro expansion at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/zcCOH/test/DampedWaveNetTests.jl:26 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] top-level scope at /home/pkgeval/.julia/packages/PortHamiltonianBenchmarkSystems/zcCOH/test/DampedWaveNetTests.jl:2 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_invoke at /source/src/gf.c:2955 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 poptask at ./task.jl:1012 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 wait at ./task.jl:1021 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x7589f9300082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] #wait#731 at ./condition.jl:130 eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 profile_printing_listener at ./Base.jl:577 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x7589f9300082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 #1190 at ./Base.jl:617 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 jfptr_YY.1190_76096.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) Allocations: 13230852 (Pool: 13228237; Big: 2615); GC: 17 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") _start at ./client.jl:531 error at ./error.jl:35 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #schedule#761 at ./task.jl:884 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7589fa64e249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) Allocations: 61966796 (Pool: 61964942; Big: 1854); GC: 42 schedule at ./task.jl:876 [inlined] uv_writecb_task at ./stream.jl:1200 jfptr_uv_writecb_task_67080.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jlcapi_uv_writecb_task_67543.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 uv_write at ./stream.jl:1081 unsafe_write at ./stream.jl:1154 write at ./strings/io.jl:248 [inlined] print at ./strings/io.jl:250 jfptr_print_48429.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 showerror at ./errorshow.jl:152 unknown function (ip: 0x7ed4a1771596) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _atexit at ./initdefs.jl:462 jfptr__atexit_69596.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] ijl_atexit_hook at /source/src/init.c:271 jl_exit_thread0_cb at /source/src/signals-unix.c:517 PkgEval terminated after 2723.96s: test duration exceeded the time limit