Package evaluation of Pingouin on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T15:14:50.148 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.35s ################################################################################ # Installation # Installing Pingouin... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [61ac1d4c] + Pingouin v0.2.3 Updating `~/.julia/environments/v1.11/Manifest.toml` [7d9f7c33] + Accessors v0.1.42 [66dad0bd] + AliasTables v1.1.3 ⌅ [336ed68f] + CSV v0.8.5 [d360d2e6] + ChainRulesCore v1.25.1 [861a8166] + Combinatorics v1.0.2 [38540f10] + CommonSolve v0.2.4 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌃ [a93c6f00] + DataFrames v1.4.4 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.4 [1a297f60] + FillArrays v1.13.0 [34004b35] + HypergeometricFunctions v0.3.28 ⌅ [09f84164] + HypothesisTests v0.10.13 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 ⌅ [92d709cd] + IrrationalConstants v0.1.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.33 ⌅ [69de0a69] + Parsers v1.1.2 [61ac1d4c] + Pingouin v0.2.3 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 ⌅ [79098fc4] + Rmath v0.7.1 [f2b01f46] + Roots v2.2.7 [91c51154] + SentinelArrays v1.4.8 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] + SortingAlgorithms v1.2.1 ⌅ [276daf66] + SpecialFunctions v1.8.8 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 ⌅ [2913bbd2] + StatsBase v0.33.21 ⌅ [4c63d2b9] + StatsFuns v0.9.18 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] + Rmath_jll v0.4.3+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 4.24s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 169.3s ################################################################################ # Testing # Testing Pingouin ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1920 Status `/tmp/jl_uk3Pdu/Project.toml` ⌃ [a93c6f00] DataFrames v1.4.4 [61ac1d4c] Pingouin v0.2.3 [8dfed614] Test v1.11.0 Status `/tmp/jl_uk3Pdu/Manifest.toml` [7d9f7c33] Accessors v0.1.42 [66dad0bd] AliasTables v1.1.3 ⌅ [336ed68f] CSV v0.8.5 [d360d2e6] ChainRulesCore v1.25.1 [861a8166] Combinatorics v1.0.2 [38540f10] CommonSolve v0.2.4 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.5.8 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌃ [a93c6f00] DataFrames v1.4.4 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [1a297f60] FillArrays v1.13.0 [34004b35] HypergeometricFunctions v0.3.28 ⌅ [09f84164] HypothesisTests v0.10.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 ⌅ [92d709cd] IrrationalConstants v0.1.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [b964fa9f] LaTeXStrings v1.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.15 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.33 ⌅ [69de0a69] Parsers v1.1.2 [61ac1d4c] Pingouin v0.2.3 [2dfb63ee] PooledArrays v1.4.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 ⌅ [79098fc4] Rmath v0.7.1 [f2b01f46] Roots v2.2.7 [91c51154] SentinelArrays v1.4.8 [66db9d55] SnoopPrecompile v1.0.3 [a2af1166] SortingAlgorithms v1.2.1 ⌅ [276daf66] SpecialFunctions v1.8.8 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 ⌅ [2913bbd2] StatsBase v0.33.21 ⌅ [4c63d2b9] StatsFuns v0.9.18 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] Rmath_jll v0.4.3+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.7.0+0 [8e850b90] libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling Pingouin... Info Given Pingouin was explicitly requested, output will be shown live  WARNING: Method definition anderson(Array{var"#s34", N} where N where var"#s34"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:131 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:140. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 8160.1 ms ? Pingouin WARNING: Method definition anderson(Array{var"#s34", N} where N where var"#s34"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:131 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:140. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Method definition anderson(Array{var"#s34", N} where N where var"#s34"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:131 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:140. WARNING: Method definition anderson(Array{Array{T, 1}, 1} where T<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:147 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:157. WARNING: Method definition _check_eftype(String) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:7 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition compute_effsize(Array{var"#s242", N} where N where var"#s242"<:Number, Array{var"#s241", N} where N where var"#s241"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:148 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.compute_effsize), Array{var"#s240", N} where N where var"#s240"<:Number, Array{var"#s239", N} where N where var"#s239"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:148 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition convert_effsize(Float64, String, String) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:308 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.convert_effsize), Float64, String, String) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:308 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: Replacing docs for `Pingouin.convert_effsize :: Tuple{Float64, String, String}` in module `Pingouin` └ @ Base.Docs docs/Docs.jl:243 WARNING: Method definition compute_effsize_from_t(Float64) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:412 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.compute_effsize_from_t), Float64) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:412 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: Replacing docs for `Pingouin.compute_effsize_from_t :: Tuple{Float64}` in module `Pingouin` └ @ Base.Docs docs/Docs.jl:243 WARNING: Method definition compute_esci() in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:537 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.compute_esci)) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:537 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: Replacing docs for `Pingouin.compute_esci :: Tuple{}` in module `Pingouin` └ @ Base.Docs docs/Docs.jl:243 WARNING: Method definition compute_bootci(Array{var"#s196", N} where N where var"#s196"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:683 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.compute_bootci), Array{var"#s195", N} where N where var"#s195"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:683 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition harrelldavis(Array{T, 1} where T<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/nonparametric.jl:580 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/nonparametric.jl:594. WARNING: Method definition harrelldavis(Array{T, 2} where T<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/nonparametric.jl:602 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/nonparametric.jl:624. Precompiling DistributionsTestExt... 3825.3 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 5 seconds. 55 already precompiled. Test Summary: | Pass Total Time Normality | 4 4 50.0s Test Summary: | Pass Total Time Homoscedasticity | 3 3 5.7s Test Summary: | Pass Total Time Sphericity | 2 2 21.5s Test Summary: | Pass Total Time Effsize | 2 2 5.9s Test Summary: | Pass Total Time Harrell-Davis | 6 6 27.5s Test Summary: | Pass Total Time Bayes_Factor_Binomial_Test | 1 1 3.8s Test Summary: | Pass Total Time Bayes_Factor_Pearson_Correlation | 2 2 5.2s Testing Pingouin tests passed Testing completed after 172.53s PkgEval succeeded after 374.49s