Package evaluation of PencilArrays on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T17:40:41.237


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.67s


################################################################################
# Installation
#

Installing PencilArrays...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [0e08944d] + PencilArrays v0.19.6
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [79e6a3ab] + Adapt v4.3.0
  [4fba245c] + ArrayInterface v7.18.0
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.16.0
  [ffbed154] + DocStringExtensions v0.9.4
  [e2ba6199] + ExprTools v0.1.10
  [615f187c] + IfElse v0.1.1
  [692b3bcd] + JLLWrappers v1.7.0
  [0f8b85d8] + JSON3 v1.14.2
  [da04e1cc] + MPI v0.20.22
  [3da0fdf6] + MPIPreferences v0.1.11
  [6fe1bfb0] + OffsetArrays v1.16.0
  [65ce6f38] + PackageExtensionCompat v1.0.2
  [69de0a69] + Parsers v2.8.1
  [0e08944d] + PencilArrays v0.19.6
  [eebad327] + PkgVersion v0.3.3
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [aedffcd0] + Static v1.2.0
  [0d7ed370] + StaticArrayInterface v1.8.0
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
  [15972242] + StaticPermutations v0.3.0
  [5e0ebb24] + Strided v2.3.0
  [4db3bf67] + StridedViews v0.4.1
  [856f2bd8] + StructTypes v1.11.0
  [a759f4b9] + TimerOutputs v0.5.28
  [9d95972d] + TupleTools v1.6.0
  [81def892] + VersionParsing v1.3.0
  [e33a78d0] + Hwloc_jll v2.12.0+0
  [7cb0a576] + MPICH_jll v4.3.0+1
  [f1f71cc9] + MPItrampoline_jll v5.5.3+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
  [fe0851c0] + OpenMPI_jll v5.0.7+2
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.6.0+0
  [e37daf67] + LibGit2_jll v1.7.2+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.6+0
  [14a3606d] + MozillaCACerts_jll v2023.12.12
  [4536629a] + OpenBLAS_jll v0.3.27+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.59.0+0
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 6.69s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 230.55s


################################################################################
# Testing
#

     Testing PencilArrays
      Status `/tmp/jl_FF0sQR/Project.toml`
  [79e6a3ab] Adapt v4.3.0
  [6e4b80f9] BenchmarkTools v1.6.0
  [34da2185] Compat v4.16.0
  [2b5f629d] DiffEqBase v6.167.2
⌅ [0c68f7d7] GPUArrays v10.3.1
  [f67ccb44] HDF5 v0.17.2
⌅ [27aeb0d3] JLArrays v0.1.6
  [0f8b85d8] JSON3 v1.14.2
  [da04e1cc] MPI v0.20.22
  [3da0fdf6] MPIPreferences v0.1.11
  [6fe1bfb0] OffsetArrays v1.16.0
  [b1df2697] OrdinaryDiffEqTsit5 v1.1.0
  [0e08944d] PencilArrays v0.19.6
  [731186ca] RecursiveArrayTools v3.31.2
  [0d7ed370] StaticArrayInterface v1.8.0
  [90137ffa] StaticArrays v1.9.13
⌃ [09ab397b] StructArrays v0.6.18
  [b77e0a4c] InteractiveUtils v1.11.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_FF0sQR/Manifest.toml`
  [47edcb42] ADTypes v1.14.0
  [7d9f7c33] Accessors v0.1.42
  [79e6a3ab] Adapt v4.3.0
  [4fba245c] ArrayInterface v7.18.0
  [6e4b80f9] BenchmarkTools v1.6.0
  [62783981] BitTwiddlingConvenienceFunctions v0.1.6
  [fa961155] CEnum v0.5.0
  [2a0fbf3d] CPUSummary v0.2.6
  [fb6a15b2] CloseOpenIntervals v0.1.13
  [38540f10] CommonSolve v0.2.4
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.16.0
  [a33af91c] CompositionsBase v0.1.2
  [2569d6c7] ConcreteStructs v0.2.3
  [187b0558] ConstructionBase v1.5.8
  [adafc99b] CpuId v0.3.1
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [2b5f629d] DiffEqBase v6.167.2
  [ffbed154] DocStringExtensions v0.9.4
  [4e289a0a] EnumX v1.0.5
  [f151be2c] EnzymeCore v0.8.8
  [e2ba6199] ExprTools v0.1.10
  [55351af7] ExproniconLite v0.10.14
  [7034ab61] FastBroadcast v0.3.5
  [9aa1b823] FastClosures v0.3.2
  [a4df4552] FastPower v1.1.2
  [1a297f60] FillArrays v1.13.0
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
⌅ [0c68f7d7] GPUArrays v10.3.1
⌅ [46192b85] GPUArraysCore v0.1.6
  [f67ccb44] HDF5 v0.17.2
  [615f187c] IfElse v0.1.1
  [3587e190] InverseFunctions v0.1.17
  [82899510] IteratorInterfaceExtensions v1.0.0
⌅ [27aeb0d3] JLArrays v0.1.6
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [0f8b85d8] JSON3 v1.14.2
  [ae98c720] Jieko v0.2.1
  [929cbde3] LLVM v9.2.0
  [10f19ff3] LayoutPointers v0.1.17
  [da04e1cc] MPI v0.20.22
  [3da0fdf6] MPIPreferences v0.1.11
  [1914dd2f] MacroTools v0.5.15
  [d125e4d3] ManualMemory v0.1.8
  [2e0e35c7] Moshi v0.3.5
  [46d2c3a1] MuladdMacro v0.2.4
  [6fe1bfb0] OffsetArrays v1.16.0
  [bac558e1] OrderedCollections v1.8.0
  [bbf590c4] OrdinaryDiffEqCore v1.22.0
  [b1df2697] OrdinaryDiffEqTsit5 v1.1.0
  [65ce6f38] PackageExtensionCompat v1.0.2
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.1
  [0e08944d] PencilArrays v0.19.6
  [eebad327] PkgVersion v0.3.3
  [f517fe37] Polyester v0.7.16
  [1d0040c9] PolyesterWeave v0.2.2
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [3cdcf5f2] RecipesBase v1.3.4
  [731186ca] RecursiveArrayTools v3.31.2
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [7e49a35a] RuntimeGeneratedFunctions v0.5.13
  [94e857df] SIMDTypes v0.1.0
  [0bca4576] SciMLBase v2.82.1
  [c0aeaf25] SciMLOperators v0.3.13
  [53ae85a6] SciMLStructures v1.7.0
  [efcf1570] Setfield v1.1.2
  [ce78b400] SimpleUnPack v1.1.0
  [aedffcd0] Static v1.2.0
  [0d7ed370] StaticArrayInterface v1.8.0
  [90137ffa] StaticArrays v1.9.13
  [1e83bf80] StaticArraysCore v1.4.3
  [15972242] StaticPermutations v0.3.0
  [10745b16] Statistics v1.11.1
  [7792a7ef] StrideArraysCore v0.5.7
  [5e0ebb24] Strided v2.3.0
  [4db3bf67] StridedViews v0.4.1
⌃ [09ab397b] StructArrays v0.6.18
  [856f2bd8] StructTypes v1.11.0
  [2efcf032] SymbolicIndexingInterface v0.3.38
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [8290d209] ThreadingUtilities v0.5.2
  [a759f4b9] TimerOutputs v0.5.28
  [781d530d] TruncatedStacktraces v1.4.0
  [9d95972d] TupleTools v1.6.0
  [3a884ed6] UnPack v1.0.2
  [81def892] VersionParsing v1.3.0
  [0234f1f7] HDF5_jll v1.14.6+0
  [e33a78d0] Hwloc_jll v2.12.0+0
  [dad2f222] LLVMExtra_jll v0.0.35+0
  [7cb0a576] MPICH_jll v4.3.0+1
  [f1f71cc9] MPItrampoline_jll v5.5.3+0
  [9237b28f] MicrosoftMPI_jll v10.1.4+3
  [fe0851c0] OpenMPI_jll v5.0.7+2
  [458c3c95] OpenSSL_jll v3.0.16+0
  [477f73a3] libaec_jll v1.1.3+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [9abbd945] Profile v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
MPIPreferences.binary = "MPICH_jll"
Precompiling PencilArrays...
   8327.6 ms  ✓ PencilArrays
  1 dependency successfully precompiled in 9 seconds. 69 already precompiled.

Julia Version 1.11.4
Commit a71dd056e0* (2025-04-07 13:42 UTC)
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 128 × AMD EPYC 7502 32-Core Processor
  WORD_SIZE: 64
  LLVM: libLLVM-16.0.6 (ORCJIT, znver2)
Threads: 1 default, 0 interactive, 1 GC (on 1 virtual cores)
Environment:
  JULIA_CPU_THREADS = 1
  JULIA_NUM_PRECOMPILE_TASKS = 1
  JULIA_PKG_PRECOMPILE_AUTO = 0
  JULIA_PKGEVAL = true
  JULIA_DEPOT_PATH = /home/pkgeval/.julia:/usr/local/share/julia:
  JULIA_NUM_THREADS = 1
  JULIA_LOAD_PATH = @:/tmp/jl_FF0sQR
MPIPreferences:
  binary:  MPICH_jll
  abi:     MPICH

Package versions
  MPI.jl:             0.20.22
  MPIPreferences.jl:  0.1.11
  MPICH_jll:          4.3.0+1

Library information:
  libmpi:  /home/pkgeval/.julia/artifacts/05d8c79b270470018e9de8dd24ddb6d7954aff9d/lib/libmpi.so
  libmpi dlpath:  /home/pkgeval/.julia/artifacts/05d8c79b270470018e9de8dd24ddb6d7954aff9d/lib/libmpi.so
  MPI version:  4.1.0
  Library version:  
    MPICH Version:      4.3.0
    MPICH Release date: Mon Feb  3 09:09:47 AM CST 2025
    MPICH ABI:          17:0:5
    MPICH Device:       ch3:nemesis
    MPICH configure:    --build=x86_64-linux-musl --disable-dependency-tracking --disable-doc --enable-fast=ndebug,O3 --enable-static=no --host=x86_64-linux-gnu --prefix=/workspace/destdir --with-device=ch3 --with-hwloc=/workspace/destdir
    MPICH CC:           cc     -DNDEBUG -DNVALGRIND -O3
    MPICH CXX:          c++   -DNDEBUG -DNVALGRIND -O3
    MPICH F77:          gfortran   -O3
    MPICH FC:           gfortran   -O3
    MPICH features:     
    
ERROR: LoadError: tests should be run with system MPI binaries for testing parallel HDF5
(found MPIPreferences.binary = MPICH_jll)

Stacktrace:
 [1] error(s::String)
   @ Base ./error.jl:35
 [2] top-level scope
   @ ~/.julia/packages/PencilArrays/zA3r4/test/runtests.jl:38
 [3] include(fname::String)
   @ Main ./sysimg.jl:38
 [4] top-level scope
   @ none:6
in expression starting at /home/pkgeval/.julia/packages/PencilArrays/zA3r4/test/runtests.jl:37

Testing failed after 33.05s

ERROR: LoadError: Package PencilArrays errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2124
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:219
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 305.11s: package tests unexpectedly errored