Package evaluation of OpenGeoSysUncertaintyQuantification on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T17:28:58.246 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.99s ################################################################################ # Installation # Installing OpenGeoSysUncertaintyQuantification... Resolving package versions... Installed HDF5 ─ v0.16.16 Updating `~/.julia/environments/v1.11/Project.toml` [2b9e718a] + OpenGeoSysUncertaintyQuantification v0.1.7 Updating `~/.julia/environments/v1.11/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [d59240d3] + AltInplaceOpsInterface v0.1.1 [dce04be8] + ArgCheck v2.5.0 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.29.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌃ [c3611d14] + ColorVectorSpace v0.10.0 ⌅ [5ae59095] + Colors v0.12.11 [34da2185] + Compat v4.16.0 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [3f0dd361] + DefaultApplication v1.1.0 [8bb1440f] + DelimitedFiles v1.9.1 [1911db96] + DistributedMonteCarlo v0.1.2 [963c640e] + DistributedSparseGrids v0.1.10 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.4 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 ⌅ [f67ccb44] + HDF5 v0.16.16 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b964fa9f] + LaTeXStrings v1.4.0 [a5e1c1ea] + LatinHypercubeSampling v1.9.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 [299715c1] + MarchingCubes v0.1.11 [e1d29d7a] + Missings v1.2.0 [77ba4419] + NaNMath v1.1.3 [711b9c6a] + Ogs6InputFileHandler v0.0.4 [2b9e718a] + OpenGeoSysUncertaintyQuantification v0.1.7 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.33 [8314cec4] + PGFPlotsX v1.6.2 [d96e819e] + Parameters v0.12.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [860ef19b] + StableRNGs v1.0.2 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.4.0 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [62fd8b95] + TensorCore v0.1.1 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [b8865327] + UnicodePlots v3.7.2 [6e9f8158] + VTUFileHandler v1.0.2 [b0b32849] + XDMFFileHandler v0.1.4 [b09a1ce3] + XMLParser v0.2.3 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.0+0 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+2 [458c3c95] + OpenSSL_jll v3.0.16+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building HDF5 → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/114e20044677badbc631ee6fdc80a67920561a29/build.log` Installation completed after 15.09s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 227.45s ################################################################################ # Testing # Testing OpenGeoSysUncertaintyQuantification Status `/tmp/jl_jwrzzI/Project.toml` [d59240d3] AltInplaceOpsInterface v0.1.1 [8bb1440f] DelimitedFiles v1.9.1 [1911db96] DistributedMonteCarlo v0.1.2 [963c640e] DistributedSparseGrids v0.1.10 [31c24e10] Distributions v0.25.118 [1fa38f19] Format v1.3.7 [711b9c6a] Ogs6InputFileHandler v0.0.4 [2b9e718a] OpenGeoSysUncertaintyQuantification v0.1.7 [8314cec4] PGFPlotsX v1.6.2 [08abe8d2] PrettyTables v2.4.0 [90137ffa] StaticArrays v1.9.13 [6e9f8158] VTUFileHandler v1.0.2 [b0b32849] XDMFFileHandler v0.1.4 [b09a1ce3] XMLParser v0.2.3 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_jwrzzI/Manifest.toml` [66dad0bd] AliasTables v1.1.3 [d59240d3] AltInplaceOpsInterface v0.1.1 [dce04be8] ArgCheck v2.5.0 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.29.0 ⌅ [3da002f7] ColorTypes v0.11.5 ⌃ [c3611d14] ColorVectorSpace v0.10.0 ⌅ [5ae59095] Colors v0.12.11 [34da2185] Compat v4.16.0 [d38c429a] Contour v0.6.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [3f0dd361] DefaultApplication v1.1.0 [8bb1440f] DelimitedFiles v1.9.1 [1911db96] DistributedMonteCarlo v0.1.2 [963c640e] DistributedSparseGrids v0.1.10 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [1a297f60] FillArrays v1.13.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 ⌅ [f67ccb44] HDF5 v0.16.16 [34004b35] HypergeometricFunctions v0.3.28 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [b964fa9f] LaTeXStrings v1.4.0 [a5e1c1ea] LatinHypercubeSampling v1.9.0 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.15 [299715c1] MarchingCubes v0.1.11 [e1d29d7a] Missings v1.2.0 [77ba4419] NaNMath v1.1.3 [711b9c6a] Ogs6InputFileHandler v0.0.4 [2b9e718a] OpenGeoSysUncertaintyQuantification v0.1.7 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.33 [8314cec4] PGFPlotsX v1.6.2 [d96e819e] Parameters v0.12.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [860ef19b] StableRNGs v1.0.2 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.4.0 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [62fd8b95] TensorCore v0.1.1 [3bb67fe8] TranscodingStreams v0.11.3 [3a884ed6] UnPack v1.0.2 [b8865327] UnicodePlots v3.7.2 [6e9f8158] VTUFileHandler v1.0.2 [b0b32849] XDMFFileHandler v0.1.4 [b09a1ce3] XMLParser v0.2.3 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.0+0 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+2 [458c3c95] OpenSSL_jll v3.0.16+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... [ Info: Running tests Test Summary: | Total Time Stochastic parameters | 0 4.1s ┌ Warning: python version < 3.12 has to be installed for this to work └ @ OpenGeoSysUncertaintyQuantification ~/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/src/OpenGeoSysUncertaintyQuantification/utils.jl:315 [ Info: installing ogs to /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/install_ogs.sh: line 4: python3: command not found /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/install_ogs.sh: line 5: /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/ogspyvenv/bin/activate: No such file or directory /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/install_ogs.sh: line 6: pip3: command not found Stochastic model setup: Error During Test at /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/runtests.jl:23 Got exception outside of a @test LoadError: failed process: Process(`bash /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/install_ogs.sh /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test`, ProcessExited(127)) [127] Stacktrace: [1] pipeline_error @ ./process.jl:598 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:513 [3] run @ ./process.jl:510 [inlined] [4] install_ogs() @ OpenGeoSysUncertaintyQuantification ~/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/src/OpenGeoSysUncertaintyQuantification/utils.jl:319 [5] top-level scope @ ~/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/tmp_test_dir/generate_stoch_model_lowres.jl:18 [6] include(fname::String) @ Main ./sysimg.jl:38 [7] macro expansion @ ~/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/runtests.jl:24 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [9] top-level scope @ ~/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/runtests.jl:24 [10] include(fname::String) @ Main ./sysimg.jl:38 [11] top-level scope @ none:6 [12] eval @ ./boot.jl:430 [inlined] [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [14] _start() @ Base ./client.jl:531 in expression starting at /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/tmp_test_dir/generate_stoch_model_lowres.jl:18 Test Summary: | Error Total Time Stochastic model setup | 1 1 5.0s ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/OpenGeoSysUncertaintyQuantification/j0CN8/test/runtests.jl:23 Testing failed after 41.17s ERROR: LoadError: Package OpenGeoSysUncertaintyQuantification errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2124 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 305.45s: package tests unexpectedly errored