Package evaluation of Oceanostics on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T19:33:24.957 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.61s ################################################################################ # Installation # Installing Oceanostics... Resolving package versions... Installed Oceananigans ─ v0.96.18 Updating `~/.julia/environments/v1.11/Project.toml` [d0ccf422] + Oceanostics v0.15.2 Updating `~/.julia/environments/v1.11/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.3.0 [a9b6321e] + Atomix v1.1.1 [ab4f0b2a] + BFloat16s v0.5.1 [fa961155] + CEnum v0.5.0 [052768ef] + CUDA v5.7.2 [1af6417a] + CUDA_Runtime_Discovery v0.3.5 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.0 [34da2185] + Compat v4.16.0 [a216cea6] + CompoundPeriods v0.5.4 [187b0558] + ConstructionBase v1.5.8 [a8cc5b0e] + Crayons v4.1.1 [7445602f] + CubedSphere v0.3.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.4 [e2ba6199] + ExprTools v0.1.10 [21656369] + ExpressionExplorer v1.1.2 [7a1cc6ca] + FFTW v1.8.1 [5789e2e9] + FileIO v1.17.0 [53c48c17] + FixedPointNumbers v0.8.5 [0c68f7d7] + GPUArrays v11.2.2 [46192b85] + GPUArraysCore v0.2.0 [61eb1bfa] + GPUCompiler v1.3.2 [096a3bc2] + GPUToolbox v0.2.0 [c27321d9] + Glob v1.3.1 [076d061b] + HashArrayMappedTries v0.2.0 [40713840] + IncompleteLU v0.2.1 [842dd82b] + InlineStrings v1.4.3 [41ab1584] + InvertedIndices v1.3.1 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.5.12 [692b3bcd] + JLLWrappers v1.7.0 [63c18a36] + KernelAbstractions v0.9.34 [929cbde3] + LLVM v9.2.0 [8b046642] + LLVMLoopInfo v1.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [da04e1cc] + MPI v0.20.22 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [78c3b35d] + Mocking v0.8.1 [5da4648a] + NVTX v1.0.0 [9e8cae18] + Oceananigans v0.96.18 [d0ccf422] + Oceanostics v0.15.2 [6fe1bfb0] + OffsetArrays v1.16.0 [bac558e1] + OrderedCollections v1.8.0 [eebad327] + PkgVersion v0.3.3 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [94ee1d12] + Quaternions v0.7.6 [74087812] + Random123 v1.7.0 [e6cf234a] + RandomNumbers v1.6.0 [a3311ec8] + ReactantCore v0.1.9 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6038ab10] + Rotations v1.7.1 [7e506255] + ScopedValues v1.3.0 [6c6a2e73] + Scratch v1.2.1 [d496a93d] + SeawaterPolynomials v0.3.9 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [892a3eda] + StringManipulation v0.4.1 [09ab397b] + StructArrays v0.7.1 [dc5dba14] + TZJData v1.5.0+2025b [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 ⌅ [6aa5eb33] + TaylorSeries v0.18.5 [f269a46b] + TimeZones v1.21.3 [a759f4b9] + TimerOutputs v0.5.28 [bdfc003b] + TimesDates v0.3.1 [3bb67fe8] + TranscodingStreams v0.11.3 [013be700] + UnsafeAtomics v0.3.0 [4ee394cb] + CUDA_Driver_jll v0.12.1+1 [76a88914] + CUDA_Runtime_jll v0.16.1+0 [f5851436] + FFTW_jll v3.3.11+0 [e33a78d0] + Hwloc_jll v2.12.0+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [9c1d0b0a] + JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] + LLVMExtra_jll v0.0.35+0 [856f044c] + MKL_jll v2025.0.1+1 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] + NVTX_jll v3.1.1+0 [fe0851c0] + OpenMPI_jll v5.0.7+2 [1e29f10c] + demumble_jll v1.3.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 12.8s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 186.76s ################################################################################ # Testing # Testing Oceanostics Status `/tmp/jl_rEtYsu/Project.toml` [052768ef] CUDA v5.7.2 [ffbed154] DocStringExtensions v0.9.4 [9e8cae18] Oceananigans v0.96.18 [d0ccf422] Oceanostics v0.15.2 [d496a93d] SeawaterPolynomials v0.3.9 [10745b16] Statistics v1.11.1 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_rEtYsu/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.3.0 [a9b6321e] Atomix v1.1.1 [ab4f0b2a] BFloat16s v0.5.1 [fa961155] CEnum v0.5.0 [052768ef] CUDA v5.7.2 [1af6417a] CUDA_Runtime_Discovery v0.3.5 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.0 [34da2185] Compat v4.16.0 [a216cea6] CompoundPeriods v0.5.4 [187b0558] ConstructionBase v1.5.8 [a8cc5b0e] Crayons v4.1.1 [7445602f] CubedSphere v0.3.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.4 [e2ba6199] ExprTools v0.1.10 [21656369] ExpressionExplorer v1.1.2 [7a1cc6ca] FFTW v1.8.1 [5789e2e9] FileIO v1.17.0 [53c48c17] FixedPointNumbers v0.8.5 [0c68f7d7] GPUArrays v11.2.2 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.3.2 [096a3bc2] GPUToolbox v0.2.0 [c27321d9] Glob v1.3.1 [076d061b] HashArrayMappedTries v0.2.0 [40713840] IncompleteLU v0.2.1 [842dd82b] InlineStrings v1.4.3 [41ab1584] InvertedIndices v1.3.1 [42fd0dbc] IterativeSolvers v0.9.4 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.12 [692b3bcd] JLLWrappers v1.7.0 [63c18a36] KernelAbstractions v0.9.34 [929cbde3] LLVM v9.2.0 [8b046642] LLVMLoopInfo v1.0.0 [b964fa9f] LaTeXStrings v1.4.0 [da04e1cc] MPI v0.20.22 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.15 [e1d29d7a] Missings v1.2.0 [78c3b35d] Mocking v0.8.1 [5da4648a] NVTX v1.0.0 [9e8cae18] Oceananigans v0.96.18 [d0ccf422] Oceanostics v0.15.2 [6fe1bfb0] OffsetArrays v1.16.0 [bac558e1] OrderedCollections v1.8.0 [eebad327] PkgVersion v0.3.3 [2dfb63ee] PooledArrays v1.4.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [94ee1d12] Quaternions v0.7.6 [74087812] Random123 v1.7.0 [e6cf234a] RandomNumbers v1.6.0 [a3311ec8] ReactantCore v0.1.9 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [6038ab10] Rotations v1.7.1 [7e506255] ScopedValues v1.3.0 [6c6a2e73] Scratch v1.2.1 [d496a93d] SeawaterPolynomials v0.3.9 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.1 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [892a3eda] StringManipulation v0.4.1 [09ab397b] StructArrays v0.7.1 [dc5dba14] TZJData v1.5.0+2025b [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 ⌅ [6aa5eb33] TaylorSeries v0.18.5 [f269a46b] TimeZones v1.21.3 [a759f4b9] TimerOutputs v0.5.28 [bdfc003b] TimesDates v0.3.1 [3bb67fe8] TranscodingStreams v0.11.3 [013be700] UnsafeAtomics v0.3.0 [4ee394cb] CUDA_Driver_jll v0.12.1+1 [76a88914] CUDA_Runtime_jll v0.16.1+0 [f5851436] FFTW_jll v3.3.11+0 [e33a78d0] Hwloc_jll v2.12.0+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [9c1d0b0a] JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] LLVMExtra_jll v0.0.35+0 [856f044c] MKL_jll v2025.0.1+1 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] NVTX_jll v3.1.1+0 [fe0851c0] OpenMPI_jll v5.0.7+2 [1e29f10c] demumble_jll v1.3.0+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: You are using Julia v1.11 or later!" │ Oceananigans is currently tested on Julia v1.10." │ If you find issues with Julia v1.11 or later," │ please report at https://github.com/CliMA/Oceananigans.jl/issues/new └ @ Oceananigans ~/.julia/packages/Oceananigans/ewrRq/src/Oceananigans.jl:118 ┌ Info: Testing NonhydrostaticModel on grid and with closure │ grid = │ 6×6×6 RectilinearGrid{Float64, Periodic, Periodic, Bounded} on CPU with 3×3×3 halo │ ├── Periodic x ∈ [0.0, 1.0) regularly spaced with Δx=0.166667 │ ├── Periodic y ∈ [0.0, 1.0) regularly spaced with Δy=0.166667 │ └── Bounded z ∈ [-1.0, 0.0] regularly spaced with Δz=0.166667 └ closure = ScalarDiffusivity{ExplicitTimeDiscretization}(ν=1.0e-6, κ=1.0e-7) [ Info: Testing velocity-only diagnostics [ Info: Testing buoyancy diagnostics [ Info: Testing pressure terms [ Info: Testing buoyancy production term [ Info: Testing auxiliary functions [ Info: Testing energy dissipation rate terms [ Info: Testing advection terms [ Info: Testing forcing terms [ Info: Testing uniform strain flow [ Info: Testing solid body rotation flow [ Info: Testing uniform shear flow ┌ Info: Testing tracer variance terms with model NonhydrostaticModel and closure └ closure = ScalarDiffusivity{ExplicitTimeDiscretization}(ν=1.0e-6, κ=1.0e-7) ┌ Info: Testing NonhydrostaticModel on grid and with closure │ grid = │ 6×6×6 RectilinearGrid{Float64, Periodic, Periodic, Bounded} on CPU with 3×3×3 halo │ ├── Periodic x ∈ [0.0, 1.0) regularly spaced with Δx=0.166667 │ ├── Periodic y ∈ [0.0, 1.0) regularly spaced with Δy=0.166667 │ └── Bounded z ∈ [-1.0, 0.0] regularly spaced with Δz=0.166667 │ closure = │ Smagorinsky closure with │ ├── coefficient = LillyCoefficient(smagorinsky = 0.16, reduction_factor = 1.0) └ └── Pr = 1.0 [ Info: Testing velocity-only diagnostics [ Info: Testing buoyancy diagnostics [ Info: Testing pressure terms [ Info: Testing buoyancy production term [ Info: Testing auxiliary functions [ Info: Testing energy dissipation rate terms [ Info: Testing advection terms [ Info: Testing forcing terms [ Info: Testing uniform strain flow [ Info: Testing solid body rotation flow [ Info: Testing uniform shear flow ┌ Info: Testing tracer variance terms with model NonhydrostaticModel and closure │ closure = │ Smagorinsky closure with │ ├── coefficient = LillyCoefficient(smagorinsky = 0.16, reduction_factor = 1.0) └ └── Pr = 1.0 ┌ Info: Testing NonhydrostaticModel on grid and with closure │ grid = │ 6×6×6 RectilinearGrid{Float64, Periodic, Periodic, Bounded} on CPU with 3×3×3 halo │ ├── Periodic x ∈ [0.0, 1.0) regularly spaced with Δx=0.166667 │ ├── Periodic y ∈ [0.0, 1.0) regularly spaced with Δy=0.166667 │ └── Bounded z ∈ [-1.0, 0.0] regularly spaced with Δz=0.166667 │ closure = │ Smagorinsky closure with │ ├── coefficient = DynamicCoefficient(averaging = (1, 2), schedule = IterationInterval(1, 0)) └ └── Pr = 1.0 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 246 running 1 of 1 signal (10): User defined signal 1 _ZNK4llvm5Value30assertModuleIsMaterializedImplEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZNK4llvm10BasicBlock20getSinglePredecessorEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution30isBasicBlockEntryGuardedByCondEPKNS_10BasicBlockENS_7CmpInst9PredicateEPKNS_4SCEVES8_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution19evaluatePredicateAtENS_7CmpInst9PredicateEPKNS_4SCEVES5_PKNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_114SimplifyIndvar21eliminateIVComparisonEPN4llvm8ICmpInstEPNS1_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_114SimplifyIndvar13simplifyUsersEPN4llvm7PHINodeEPNS1_9IVVisitorE.constprop.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm17simplifyUsersOfIVEPNS_7PHINodeEPNS_15ScalarEvolutionEPNS_13DominatorTreeEPNS_8LoopInfoEPKNS_19TargetTransformInfoERNS_15SmallVectorImplINS_14WeakTrackingVHEEERNS_12SCEVExpanderEPNS_9IVVisitorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_114IndVarSimplify3runEPN4llvm4LoopE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm18IndVarSimplifyPass3runERNS_4LoopERNS_15AnalysisManagerIS1_JRNS_27LoopStandardAnalysisResultsEEEES5_RNS_10LPMUpdaterE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm11PassManagerINS_4LoopENS_15AnalysisManagerIS1_JRNS_27LoopStandardAnalysisResultsEEEEJS4_RNS_10LPMUpdaterEEE24runWithoutLoopNestPassesERS1_RS5_S4_S7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm11PassManagerINS_4LoopENS_15AnalysisManagerIS1_JRNS_27LoopStandardAnalysisResultsEEEEJS4_RNS_10LPMUpdaterEEE3runERS1_RS5_S4_S7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm25FunctionToLoopPassAdaptor3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 run at /source/usr/include/llvm/IR/PassManager.h:517 [inlined] run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/src/pipeline.cpp:777 operator() at /source/src/jitlayers.cpp:1298 withModuleDo<(anonymous namespace)::OptimizerT::operator()(llvm::orc::ThreadSafeModule, llvm::orc::MaterializationResponsibility&) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1259 [inlined] CallImpl<(anonymous namespace)::OptimizerT<4> > at /source/usr/include/llvm/ADT/FunctionExtras.h:221 _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6detail18UniqueFunctionBaseIvJSt10unique_ptrINS_3orc4TaskESt14default_deleteIS4_EEEE8CallImplIPFvS7_EEEvPvRS7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) addModule at /source/src/jitlayers.cpp:1875 jl_add_to_ee at /source/src/jitlayers.cpp:2306 _jl_compile_codeinst at /source/src/jitlayers.cpp:277 jl_generate_fptr_impl at /source/src/jitlayers.cpp:536 jl_compile_method_internal at /source/src/gf.c:2536 [inlined] jl_compile_method_internal at /source/src/gf.c:2423 _jl_invoke at /source/src/gf.c:2940 [inlined] ijl_apply_generic at /source/src/gf.c:3125 __run at /home/pkgeval/.julia/packages/KernelAbstractions/sWSE0/src/cpu.jl:111 unknown function (ip: 0x78cf211f1ca0) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #_#16 at /home/pkgeval/.julia/packages/KernelAbstractions/sWSE0/src/cpu.jl:45 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_apply at /source/src/builtins.c:831 Kernel at /home/pkgeval/.julia/packages/KernelAbstractions/sWSE0/src/cpu.jl:38 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #_launch!#12 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/kernel_launching.jl:298 [inlined] _launch! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/kernel_launching.jl:275 [inlined] #launch!#8 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/kernel_launching.jl:258 [inlined] launch! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/kernel_launching.jl:258 [inlined] #compute_coefficient_fields!#8 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/TurbulenceClosures/turbulence_closure_implementations/Smagorinskys/dynamic_coefficient.jl:188 compute_coefficient_fields! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/TurbulenceClosures/turbulence_closure_implementations/Smagorinskys/dynamic_coefficient.jl:179 [inlined] #compute_diffusivities!#4 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/TurbulenceClosures/turbulence_closure_implementations/Smagorinskys/smagorinsky.jl:115 compute_diffusivities! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/TurbulenceClosures/turbulence_closure_implementations/Smagorinskys/smagorinsky.jl:108 [inlined] #compute_auxiliaries!#16 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/NonhydrostaticModels/update_nonhydrostatic_model_state.jl:66 unknown function (ip: 0x78cf211e7d57) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 compute_auxiliaries! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/NonhydrostaticModels/update_nonhydrostatic_model_state.jl:59 #apply_regionally!#56 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/multi_region_transformation.jl:121 [inlined] apply_regionally! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/multi_region_transformation.jl:118 [inlined] macro expansion at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/multi_region_transformation.jl:206 [inlined] #update_state!#13 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/NonhydrostaticModels/update_nonhydrostatic_model_state.jl:43 update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/NonhydrostaticModels/update_nonhydrostatic_model_state.jl:20 [inlined] update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/NonhydrostaticModels/update_nonhydrostatic_model_state.jl:20 unknown function (ip: 0x78cf211e0a16) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #NonhydrostaticModel#1 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/NonhydrostaticModels/nonhydrostatic_model.jl:236 unknown function (ip: 0x78cf211be174) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 NonhydrostaticModel at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/NonhydrostaticModels/nonhydrostatic_model.jl:114 unknown function (ip: 0x78cf211bd426) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_body at /source/src/interpreter.c:562 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x78cf46100082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x78cf47441249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x7bf04c1724e2) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2142 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2082 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x7bf04c16ae3d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1837 unknown function (ip: 0x7bf04c15f3fa) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x7bf04c15f0fd) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x7bf04c15eaed) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x7bf04c15af96) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7bf04d3cd249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x00007bf03fe00010 Total snapshots: 1. Utilization: 0% ╎1 @Base/client.jl:531; _start() ╎ 1 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 1 @Base/Base.jl:557; include(mod::Module, _path::String) ╎ 1 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path::S… ╎ 1 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod::M… ╎ 1 @Base/boot.jl:430; eval ╎ ╎ 1 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 1 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 1 @Pkg/src/API.jl:147; test ╎ ╎ 1 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 1 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ ╎ 1 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec}; i… ╎ ╎ ╎ 1 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io::… ╎ ╎ ╎ 1 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vector… ╎ ╎ ╎ 1 …/src/Operations.jl:2007; test ╎ ╎ ╎ 1 …src/Operations.jl:2063; test(ctx::Pkg.Types.Context, pkgs::… ╎ ╎ ╎ ╎ 1 …src/Operations.jl:1837; kwcall(::@NamedTuple{preferences::… ╎ ╎ ╎ ╎ 1 …src/Operations.jl:1845; #sandbox#115 ╎ ╎ ╎ ╎ 1 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 1 @Base/file.jl:815; mktempdir(fn::Function, parent::Strin… ╎ ╎ ╎ ╎ 1 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#11… ╎ ╎ ╎ ╎ ╎ 1 …c/Operations.jl:1898; (::Pkg.Operations.var"#116#121"… ╎ ╎ ╎ ╎ ╎ 1 …c/Operations.jl:1789; with_temp_env(fn::Pkg.Operatio… ╎ ╎ ╎ ╎ ╎ 1 …/Operations.jl:1931; (::Pkg.Operations.var"#118#123… ╎ ╎ ╎ ╎ ╎ 1 @Base/env.jl:265; withenv(::Pkg.Operations.var"#131… ╎ ╎ ╎ ╎ ╎ 1 …Operations.jl:2082; (::Pkg.Operations.var"#131#13… ╎ ╎ ╎ ╎ ╎ ╎ 1 …Operations.jl:2142; subprocess_handler(cmd::Cmd,… ╎ ╎ ╎ ╎ ╎ ╎ 1 …se/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 1 …se/process.jl:694; wait(x::Base.Process, syncd… ╎ ╎ ╎ ╎ ╎ ╎ 1 …condition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 1 …condition.jl:130; wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 …ase/task.jl:1021; wait() ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 …ase/task.jl:1012; poptask(W::Base.Intrusiv… [246] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/Oceanostics/ZtlG9/test/runtests.jl:593 unknown function (ip: 0x78cf4756d3c4) _ZN4llvm19SmallPtrSetImplBase4GrowEj at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm19SmallPtrSetImplBase14insert_imp_bigEPKv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm8visitAllIZNS_16SCEVExprContainsIZNKS_15ScalarEvolution13checkValidityEPKNS_4SCEVEEUlS5_E_EEbS5_T_E11FindClosureEEvS5_RS7_.constprop.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution15getExistingSCEVEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution7getSCEVEPNS_5ValueE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution13isImpliedCondENS_7CmpInst9PredicateEPKNS_4SCEVES5_PKNS_5ValueEbPKNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution13isImpliedCondENS_7CmpInst9PredicateEPKNS_4SCEVES5_PKNS_5ValueEbPKNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution13isImpliedCondENS_7CmpInst9PredicateEPKNS_4SCEVES5_PKNS_5ValueEbPKNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution30isBasicBlockEntryGuardedByCondEPKNS_10BasicBlockENS_7CmpInst9PredicateEPKNS_4SCEVES8_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution19evaluatePredicateAtENS_7CmpInst9PredicateEPKNS_4SCEVES5_PKNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_114SimplifyIndvar21eliminateIVComparisonEPN4llvm8ICmpInstEPNS1_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_114SimplifyIndvar13simplifyUsersEPN4llvm7PHINodeEPNS1_9IVVisitorE.constprop.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) PkgEval terminated after 2733.21s: test duration exceeded the time limit