Package evaluation of OceanBioME on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T19:58:02.154 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.43s ################################################################################ # Installation # Installing OceanBioME... Resolving package versions... Installed GibbsSeaWater ─ v0.1.4 Installed OceanBioME ──── v0.14.0 Updating `~/.julia/environments/v1.11/Project.toml` [a49af516] + OceanBioME v0.14.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [a9b6321e] + Atomix v1.1.1 [ab4f0b2a] + BFloat16s v0.5.1 [fa961155] + CEnum v0.5.0 [052768ef] + CUDA v5.7.2 [1af6417a] + CUDA_Runtime_Discovery v0.3.5 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.0 [38540f10] + CommonSolve v0.2.4 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [a216cea6] + CompoundPeriods v0.5.4 [187b0558] + ConstructionBase v1.5.8 [a8cc5b0e] + Crayons v4.1.1 [7445602f] + CubedSphere v0.3.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.4 [e2ba6199] + ExprTools v0.1.10 [21656369] + ExpressionExplorer v1.1.2 [7a1cc6ca] + FFTW v1.8.1 [5789e2e9] + FileIO v1.17.0 [53c48c17] + FixedPointNumbers v0.8.5 [0c68f7d7] + GPUArrays v11.2.2 [46192b85] + GPUArraysCore v0.2.0 [61eb1bfa] + GPUCompiler v1.3.2 [096a3bc2] + GPUToolbox v0.2.0 [9a22fb26] + GibbsSeaWater v0.1.4 [c27321d9] + Glob v1.3.1 [076d061b] + HashArrayMappedTries v0.2.0 [40713840] + IncompleteLU v0.2.1 [842dd82b] + InlineStrings v1.4.3 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.5.12 [692b3bcd] + JLLWrappers v1.7.0 [63c18a36] + KernelAbstractions v0.9.34 [929cbde3] + LLVM v9.2.0 [8b046642] + LLVMLoopInfo v1.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [da04e1cc] + MPI v0.20.22 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [78c3b35d] + Mocking v0.8.1 [5da4648a] + NVTX v1.0.0 [a49af516] + OceanBioME v0.14.0 [9e8cae18] + Oceananigans v0.96.18 [6fe1bfb0] + OffsetArrays v1.16.0 [bac558e1] + OrderedCollections v1.8.0 [eebad327] + PkgVersion v0.3.3 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [94ee1d12] + Quaternions v0.7.6 [74087812] + Random123 v1.7.0 [e6cf234a] + RandomNumbers v1.6.0 [a3311ec8] + ReactantCore v0.1.9 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [f2b01f46] + Roots v2.2.7 [6038ab10] + Rotations v1.7.1 [7e506255] + ScopedValues v1.3.0 [6c6a2e73] + Scratch v1.2.1 [d496a93d] + SeawaterPolynomials v0.3.9 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [892a3eda] + StringManipulation v0.4.1 [09ab397b] + StructArrays v0.7.1 [dc5dba14] + TZJData v1.5.0+2025b [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 ⌅ [6aa5eb33] + TaylorSeries v0.18.5 [f269a46b] + TimeZones v1.21.3 [a759f4b9] + TimerOutputs v0.5.28 [bdfc003b] + TimesDates v0.3.1 [3bb67fe8] + TranscodingStreams v0.11.3 [013be700] + UnsafeAtomics v0.3.0 [4ee394cb] + CUDA_Driver_jll v0.12.1+1 [76a88914] + CUDA_Runtime_jll v0.16.1+0 [f5851436] + FFTW_jll v3.3.11+0 [6727f6b2] + GibbsSeaWater_jll v3.5.2+0 [e33a78d0] + Hwloc_jll v2.12.0+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [9c1d0b0a] + JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] + LLVMExtra_jll v0.0.35+0 [856f044c] + MKL_jll v2025.0.1+1 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] + NVTX_jll v3.1.1+0 [fe0851c0] + OpenMPI_jll v5.0.7+2 [1e29f10c] + demumble_jll v1.3.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building GibbsSeaWater → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/f4318e7a751703a5db8b57c112e5cd5c218d296b/build.log` Installation completed after 14.16s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 59.67s ################################################################################ # Testing # Testing OceanBioME Status `/tmp/jl_cx05dZ/Project.toml` [79e6a3ab] Adapt v4.3.0 [a9b6321e] Atomix v1.1.1 [052768ef] CUDA v5.7.2 [124859b0] DataDeps v0.7.13 [e30172f5] Documenter v1.10.1 [9a22fb26] GibbsSeaWater v0.1.4 [033835bb] JLD2 v0.5.12 [63c18a36] KernelAbstractions v0.9.34 [a49af516] OceanBioME v0.14.0 [9e8cae18] Oceananigans v0.96.18 [6fe1bfb0] OffsetArrays v1.16.0 [f2b01f46] Roots v2.2.7 [d496a93d] SeawaterPolynomials v0.3.9 [10745b16] Statistics v1.11.1 [8dfed614] Test v1.11.0 Status `/tmp/jl_cx05dZ/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [a9b6321e] Atomix v1.1.1 [ab4f0b2a] BFloat16s v0.5.1 [d1d4a3ce] BitFlags v0.1.9 [fa961155] CEnum v0.5.0 [052768ef] CUDA v5.7.2 [1af6417a] CUDA_Runtime_Discovery v0.3.5 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.0 [38540f10] CommonSolve v0.2.4 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [a216cea6] CompoundPeriods v0.5.4 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.5.8 [a8cc5b0e] Crayons v4.1.1 [7445602f] CubedSphere v0.3.1 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.4 [e30172f5] Documenter v1.10.1 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [21656369] ExpressionExplorer v1.1.2 [7a1cc6ca] FFTW v1.8.1 [5789e2e9] FileIO v1.17.0 [53c48c17] FixedPointNumbers v0.8.5 [0c68f7d7] GPUArrays v11.2.2 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.3.2 [096a3bc2] GPUToolbox v0.2.0 [9a22fb26] GibbsSeaWater v0.1.4 [d7ba0133] Git v1.3.1 [c27321d9] Glob v1.3.1 [cd3eb016] HTTP v1.10.15 [076d061b] HashArrayMappedTries v0.2.0 [b5f81e59] IOCapture v0.2.5 [40713840] IncompleteLU v0.2.1 [842dd82b] InlineStrings v1.4.3 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [42fd0dbc] IterativeSolvers v0.9.4 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.12 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [63c18a36] KernelAbstractions v0.9.34 [929cbde3] LLVM v9.2.0 [8b046642] LLVMLoopInfo v1.0.0 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [e6f89c97] LoggingExtras v1.1.0 [da04e1cc] MPI v0.20.22 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.15 [d0879d2d] MarkdownAST v0.1.2 [739be429] MbedTLS v1.1.9 [e1d29d7a] Missings v1.2.0 [78c3b35d] Mocking v0.8.1 [5da4648a] NVTX v1.0.0 [a49af516] OceanBioME v0.14.0 [9e8cae18] Oceananigans v0.96.18 [6fe1bfb0] OffsetArrays v1.16.0 [4d8831e6] OpenSSL v1.4.3 [bac558e1] OrderedCollections v1.8.0 [69de0a69] Parsers v2.8.1 [eebad327] PkgVersion v0.3.3 [2dfb63ee] PooledArrays v1.4.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [94ee1d12] Quaternions v0.7.6 [74087812] Random123 v1.7.0 [e6cf234a] RandomNumbers v1.6.0 [a3311ec8] ReactantCore v0.1.9 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [f2b01f46] Roots v2.2.7 [6038ab10] Rotations v1.7.1 [7e506255] ScopedValues v1.3.0 [6c6a2e73] Scratch v1.2.1 [d496a93d] SeawaterPolynomials v0.3.9 [91c51154] SentinelArrays v1.4.8 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.1 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [892a3eda] StringManipulation v0.4.1 [09ab397b] StructArrays v0.7.1 [dc5dba14] TZJData v1.5.0+2025b [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 ⌅ [6aa5eb33] TaylorSeries v0.18.5 [f269a46b] TimeZones v1.21.3 [a759f4b9] TimerOutputs v0.5.28 [bdfc003b] TimesDates v0.3.1 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.5.2 [013be700] UnsafeAtomics v0.3.0 [4ee394cb] CUDA_Driver_jll v0.12.1+1 [76a88914] CUDA_Runtime_jll v0.16.1+0 [2e619515] Expat_jll v2.6.5+0 [f5851436] FFTW_jll v3.3.11+0 [6727f6b2] GibbsSeaWater_jll v3.5.2+0 [f8c6e375] Git_jll v2.49.0+0 [e33a78d0] Hwloc_jll v2.12.0+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [9c1d0b0a] JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] LLVMExtra_jll v0.0.35+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.0.1+1 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] NVTX_jll v3.1.1+0 [fe0851c0] OpenMPI_jll v5.0.7+2 [458c3c95] OpenSSL_jll v3.0.16+0 [1e29f10c] demumble_jll v1.3.0+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [efcefdf7] PCRE2_jll v10.42.0+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: You are using Julia v1.11 or later!" │ Oceananigans is currently tested on Julia v1.10." │ If you find issues with Julia v1.11 or later," │ please report at https://github.com/CliMA/Oceananigans.jl/issues/new └ @ Oceananigans ~/.julia/packages/Oceananigans/ewrRq/src/Oceananigans.jl:118 Precompiling Documenter... 47444.6 ms ✓ Documenter 1 dependency successfully precompiled in 48 seconds. 50 already precompiled. [ Info: Initializing simulation... [ Info: ... simulation initialization complete (36.179 seconds) [ Info: Executing initial time step... [ Info: Simulation is stopping after running for 0 seconds. [ Info: Model iteration 1 equals or exceeds stop iteration 1. [ Info: ... initial time step complete (24.952 seconds). [ Info: Initializing simulation... [ Info: ... simulation initialization complete (18.644 seconds) [ Info: Executing initial time step... [ Info: Simulation is stopping after running for 0 seconds. [ Info: Model iteration 1 equals or exceeds stop iteration 1. [ Info: ... initial time step complete (15.701 seconds). Test Summary: | Pass Total Time Test negative tracer handeling | 2 2 6m09.6s Test Summary: | Pass Total Time Test sinking velocity setup | 6 6 3.5s ┌ Info: Testing light with LOBSTER in NonhydrostaticModel on 2×2×2 RectilinearGrid{Float64, Periodic, Periodic, Bounded} on CPU with 2×2×2 halo │ ├── Periodic x ∈ [0.0, 2.0) regularly spaced with Δx=1.0 │ ├── Periodic y ∈ [0.0, 2.0) regularly spaced with Δy=1.0 └ └── Bounded z ∈ [-2.0, 0.0] regularly spaced with Δz=1.0... ┌ Info: Testing light with NutrientPhytoplanktonZooplanktonDetritus in NonhydrostaticModel on 2×2×2 RectilinearGrid{Float64, Periodic, Periodic, Bounded} on CPU with 2×2×2 halo │ ├── Periodic x ∈ [0.0, 2.0) regularly spaced with Δx=1.0 │ ├── Periodic y ∈ [0.0, 2.0) regularly spaced with Δy=1.0 └ └── Bounded z ∈ [-2.0, 0.0] regularly spaced with Δz=1.0... ┌ Info: Testing light with LOBSTER in HydrostaticFreeSurfaceModel on 2×2×2 RectilinearGrid{Float64, Periodic, Periodic, Bounded} on CPU with 2×2×2 halo │ ├── Periodic x ∈ [0.0, 2.0) regularly spaced with Δx=1.0 │ ├── Periodic y ∈ [0.0, 2.0) regularly spaced with Δy=1.0 └ └── Bounded z ∈ [-2.0, 0.0] regularly spaced with Δz=1.0... ┌ Info: Testing light with NutrientPhytoplanktonZooplanktonDetritus in HydrostaticFreeSurfaceModel on 2×2×2 RectilinearGrid{Float64, Periodic, Periodic, Bounded} on CPU with 2×2×2 halo │ ├── Periodic x ∈ [0.0, 2.0) regularly spaced with Δx=1.0 │ ├── Periodic y ∈ [0.0, 2.0) regularly spaced with Δy=1.0 └ └── Bounded z ∈ [-2.0, 0.0] regularly spaced with Δz=1.0... ┌ Info: Testing light with LOBSTER in HydrostaticFreeSurfaceModel on 5×5×2 LatitudeLongitudeGrid{Float64, Periodic, Bounded, Bounded} on CPU with 3×3×2 halo and with precomputed metrics │ ├── longitude: Periodic λ ∈ [-180.0, 180.0) regularly spaced with Δλ=72.0 │ ├── latitude: Bounded φ ∈ [-85.0, 85.0] regularly spaced with Δφ=34.0 └ └── z: Bounded z ∈ [-2.0, 0.0] regularly spaced with Δz=1.0... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 221 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm5SUnit7addPredERKNS_4SDepEb at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm5SUnit14addPredBarrierEPS0_.isra.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm17ScheduleDAGInstrs15buildSchedGraphEPNS_9AAResultsEPNS_18RegPressureTrackerEPNS_13PressureDiffsEPNS_13LiveIntervalsEb at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_120SchedulePostRATDList8scheduleEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_115PostRAScheduler20runOnMachineFunctionERN4llvm15MachineFunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) operator() at /source/src/jitlayers.cpp:1388 _ZN4llvm3orc14IRCompileLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6detail18UniqueFunctionBaseIvJSt10unique_ptrINS_3orc4TaskESt14default_deleteIS4_EEEE8CallImplIPFvS7_EEEvPvRS7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) addModule at /source/src/jitlayers.cpp:1875 jl_add_to_ee at /source/src/jitlayers.cpp:2306 _jl_compile_codeinst at /source/src/jitlayers.cpp:277 jl_generate_fptr_impl at /source/src/jitlayers.cpp:536 jl_compile_method_internal at /source/src/gf.c:2536 [inlined] jl_compile_method_internal at /source/src/gf.c:2423 _jl_invoke at /source/src/gf.c:2940 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_apply at /source/src/builtins.c:831 #fill_halo_event!#26 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/BoundaryConditions/fill_halo_regions.jl:79 fill_halo_event! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/BoundaryConditions/fill_halo_regions.jl:69 unknown function (ip: 0x7321ec21e66a) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_apply at /source/src/builtins.c:831 #fill_halo_regions!#25 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/BoundaryConditions/fill_halo_regions.jl:63 fill_halo_regions! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/BoundaryConditions/fill_halo_regions.jl:50 unknown function (ip: 0x7321ec35eb3a) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_apply at /source/src/builtins.c:831 #tupled_fill_halo_regions!#86 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Fields/field_tuples.jl:93 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_apply at /source/src/builtins.c:831 tupled_fill_halo_regions! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Fields/field_tuples.jl:88 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #update_state!#35 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:42 update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:32 [inlined] #update_state!#34 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:29 [inlined] update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:29 [inlined] update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:29 [inlined] #initialization_update_state!#1 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/Models.jl:42 [inlined] initialization_update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/Models.jl:42 unknown function (ip: 0x7321eed70336) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #HydrostaticFreeSurfaceModel#19 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/hydrostatic_free_surface_model.jl:221 unknown function (ip: 0x7321ef1b2be5) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 HydrostaticFreeSurfaceModel at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/hydrostatic_free_surface_model.jl:110 unknown function (ip: 0x7321ef1a0b26) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test_two_band at /home/pkgeval/.julia/packages/OceanBioME/3rlsy/test/test_light.jl:17 unknown function (ip: 0x7321ef18ef2d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 macro expansion at /home/pkgeval/.julia/packages/OceanBioME/3rlsy/test/test_light.jl:114 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] top-level scope at /home/pkgeval/.julia/packages/OceanBioME/3rlsy/test/test_light.jl:107 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_invoke at /source/src/gf.c:2955 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x732217500082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x732217500082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7322188a1249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x76a33ef764e2) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2142 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2082 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x76a33ef75dcd) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1837 unknown function (ip: 0x76a33ef6a65a) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x76a33ef6a35d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x76a33ef69d4d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x76a33ef661f6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x76a3402b2249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000076a332c00010 Total snapshots: 18. Utilization: 0% ╎18 @Base/client.jl:531; _start() ╎ 18 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 18 @Base/Base.jl:557; include(mod::Module, _path::String) ╎ 18 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path:… ╎ 18 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod:… ╎ 18 @Base/boot.jl:430; eval ╎ ╎ 18 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeo… ╎ ╎ 18 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 18 @Pkg/src/API.jl:147; test ╎ ╎ 18 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 18 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::t… ╎ ╎ ╎ 18 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec};… ╎ ╎ ╎ 18 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io… ╎ ╎ ╎ 18 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vect… ╎ ╎ ╎ 18 …src/Operations.jl:2007; test ╎ ╎ ╎ 18 …src/Operations.jl:2063; test(ctx::Pkg.Types.Context, pkgs… ╎ ╎ ╎ ╎ 18 …rc/Operations.jl:1837; kwcall(::@NamedTuple{preferences:… ╎ ╎ ╎ ╎ 18 …rc/Operations.jl:1845; #sandbox#115 ╎ ╎ ╎ ╎ 18 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 18 @Base/file.jl:815; mktempdir(fn::Function, parent::Str… ╎ ╎ ╎ ╎ 18 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#… ╎ ╎ ╎ ╎ ╎ 18 …/Operations.jl:1898; (::Pkg.Operations.var"#116#121… ╎ ╎ ╎ ╎ ╎ 18 …/Operations.jl:1789; with_temp_env(fn::Pkg.Operati… ╎ ╎ ╎ ╎ ╎ 18 …Operations.jl:1931; (::Pkg.Operations.var"#118#12… ╎ ╎ ╎ ╎ ╎ 18 @Base/env.jl:265; withenv(::Pkg.Operations.var"#1… ╎ ╎ ╎ ╎ ╎ 18 …Operations.jl:2082; (::Pkg.Operations.var"#131#… ╎ ╎ ╎ ╎ ╎ ╎ 18 …perations.jl:2142; subprocess_handler(cmd::Cmd… ╎ ╎ ╎ ╎ ╎ ╎ 18 …e/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 18 …e/process.jl:694; wait(x::Base.Process, sync… ╎ ╎ ╎ ╎ ╎ ╎ 18 …ondition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 18 …ondition.jl:130; wait(c::Base.GenericCondi… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 18 …ase/task.jl:1021; wait() 17╎ ╎ ╎ ╎ ╎ ╎ ╎ 18 …ase/task.jl:1012; poptask(W::Base.Intrus… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 [221] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/OceanBioME/3rlsy/test/test_light.jl:106 _ZN4llvm10LiveStacks19getOrCreateIntervalEiPKNS_19TargetRegisterClassE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) poptask at ./task.jl:1012 wait at ./task.jl:1021 _ZN12_GLOBAL__N_113InlineSpiller5spillERN4llvm13LiveRangeEditE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 _ZN4llvm8RAGreedy17selectOrSplitImplERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEERNS_8SmallSetIS5_Lj16ESt4lessIS5_EEERNS_11SmallVectorISt4pairIPS2_NS_10MCRegisterEELj8EEEj at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) profile_printing_listener at ./Base.jl:577 #1190 at ./Base.jl:617 _ZN4llvm8RAGreedy13selectOrSplitERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm12RegAllocBase16allocatePhysRegsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) jfptr_YY.1190_76096.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) Allocations: 19349831 (Pool: 19346658; Big: 3173); GC: 21 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") _ZN4llvm8RAGreedy20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) error at ./error.jl:35 #schedule#761 at ./task.jl:884 _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) operator() at /source/src/jitlayers.cpp:1388 schedule at ./task.jl:876 [inlined] _ZN4llvm3orc14IRCompileLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) uv_writecb_task at ./stream.jl:1200 _ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) jfptr_uv_writecb_task_67080.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _ZN4llvm6detail18UniqueFunctionBaseIvJSt10unique_ptrINS_3orc4TaskESt14default_deleteIS4_EEEE8CallImplIPFvS7_EEEvPvRS7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) jlcapi_uv_writecb_task_67543.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) addModule at /source/src/jitlayers.cpp:1875 jl_add_to_ee at /source/src/jitlayers.cpp:2306 jl_add_to_ee at /source/src/jitlayers.cpp:2285 _jl_compile_codeinst at /source/src/jitlayers.cpp:277 jl_generate_fptr_impl at /source/src/jitlayers.cpp:536 jl_compile_method_internal at /source/src/gf.c:2536 [inlined] jl_compile_method_internal at /source/src/gf.c:2423 _jl_invoke at /source/src/gf.c:2940 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #_#16 at /home/pkgeval/.julia/packages/KernelAbstractions/sWSE0/src/cpu.jl:45 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 wait at ./task.jl:1021 jl_apply at /source/src/julia.h:2157 [inlined] do_apply at /source/src/builtins.c:831 Kernel at /home/pkgeval/.julia/packages/KernelAbstractions/sWSE0/src/cpu.jl:38 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #_launch!#12 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/kernel_launching.jl:298 [inlined] _launch! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/kernel_launching.jl:275 [inlined] #launch!#8 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/kernel_launching.jl:258 [inlined] launch! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Utils/kernel_launching.jl:258 [inlined] update_biogeochemical_state! at /home/pkgeval/.julia/packages/OceanBioME/3rlsy/src/Light/2band.jl:126 update_biogeochemical_state! at /home/pkgeval/.julia/packages/OceanBioME/3rlsy/src/OceanBioME.jl:155 [inlined] #update_state!#35 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:51 update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:32 [inlined] #update_state!#34 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:29 [inlined] update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:29 [inlined] update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_free_surface_model_state.jl:29 [inlined] #initialization_update_state!#1 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/Models.jl:42 [inlined] initialization_update_state! at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/Models.jl:42 unknown function (ip: 0x7321eed70336) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #HydrostaticFreeSurfaceModel#19 at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/hydrostatic_free_surface_model.jl:221 unknown function (ip: 0x7321ef1b2be5) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 HydrostaticFreeSurfaceModel at /home/pkgeval/.julia/packages/Oceananigans/ewrRq/src/Models/HydrostaticFreeSurfaceModels/hydrostatic_free_surface_model.jl:110 unknown function (ip: 0x7321ef1a0b26) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test_two_band at /home/pkgeval/.julia/packages/OceanBioME/3rlsy/test/test_light.jl:17 unknown function (ip: 0x7321ef18ef2d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 macro expansion at /home/pkgeval/.julia/packages/OceanBioME/3rlsy/test/test_light.jl:114 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] top-level scope at /home/pkgeval/.julia/packages/OceanBioME/3rlsy/test/test_light.jl:107 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_invoke at /source/src/gf.c:2955 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 uv_write at ./stream.jl:1081 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 unsafe_write at ./stream.jl:1154 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x732217500082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 write at ./strings/io.jl:248 [inlined] print at ./strings/io.jl:250 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 jfptr_print_48429.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 showerror at ./errorshow.jl:152 unknown function (ip: 0x76a33ef82b16) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _atexit at ./initdefs.jl:462 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x732217500082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 jfptr__atexit_69596.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] ijl_atexit_hook at /source/src/init.c:271 jl_exit_thread0_cb at /source/src/signals-unix.c:517 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7322188a1249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) Allocations: 315582887 (Pool: 315565949; Big: 16938); GC: 118 PkgEval terminated after 2724.45s: test duration exceeded the time limit