Package evaluation of Nucleotide_Essentials on Julia 1.11.4 (a71dd056e0*) started at 2025-04-09T00:56:02.130


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.99s


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# Installation
#

Installing Nucleotide_Essentials...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [e3db82ae] + Nucleotide_Essentials v0.2.1
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [a4c015fc] + ANSIColoredPrinters v0.0.1
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  [7d9fca2a] + Arpack v0.5.4
⌃ [13072b0f] + AxisAlgorithms v1.0.1
  [6e4b80f9] + BenchmarkTools v1.6.0
  [d1d4a3ce] + BitFlags v0.1.9
  [e1450e63] + BufferedStreams v1.2.2
  [336ed68f] + CSV v0.10.15
⌅ [8be319e6] + Chain v0.4.10
  [d360d2e6] + ChainRulesCore v1.25.1
⌅ [aaaa29a8] + Clustering v0.14.4
  [944b1d66] + CodecZlib v0.7.8
  [35d6a980] + ColorSchemes v3.29.0
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  [e3db82ae] + Nucleotide_Essentials v0.2.1
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        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 6.77s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 549.09s


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# Testing
#

     Testing Nucleotide_Essentials
      Status `/tmp/jl_K5cJxy/Project.toml`
  [e3db82ae] Nucleotide_Essentials v0.2.1
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_K5cJxy/Manifest.toml`
  [a4c015fc] ANSIColoredPrinters v0.0.1
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  [7d9fca2a] Arpack v0.5.4
⌃ [13072b0f] AxisAlgorithms v1.0.1
  [6e4b80f9] BenchmarkTools v1.6.0
  [d1d4a3ce] BitFlags v0.1.9
  [e1450e63] BufferedStreams v1.2.2
  [336ed68f] CSV v0.10.15
⌅ [8be319e6] Chain v0.4.10
  [d360d2e6] ChainRulesCore v1.25.1
⌅ [aaaa29a8] Clustering v0.14.4
  [944b1d66] CodecZlib v0.7.8
  [35d6a980] ColorSchemes v3.29.0
  [3da002f7] ColorTypes v0.12.1
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  [5ae59095] Colors v0.13.0
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⌅ [1313f7d8] DataFramesMeta v0.11.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [e7dc6d0d] DataValues v0.4.13
  [8bb1440f] DelimitedFiles v1.9.1
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⌅ [6f286f6a] MultivariateStats v0.9.0
  [77ba4419] NaNMath v1.1.3
  [b8a86587] NearestNeighbors v0.4.21
  [e3db82ae] Nucleotide_Essentials v0.2.1
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  [322a6be2] Sass v0.2.0
  [6c6a2e73] Scratch v1.2.1
  [91c51154] SentinelArrays v1.4.8
  [992d4aef] Showoff v1.0.3
  [777ac1f9] SimpleBufferStream v1.2.0
  [66db9d55] SnoopPrecompile v1.0.3
  [a2af1166] SortingAlgorithms v1.2.1
  [276daf66] SpecialFunctions v2.5.0
  [860ef19b] StableRNGs v1.0.2
  [90137ffa] StaticArrays v1.9.13
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
⌅ [2913bbd2] StatsBase v0.33.21
  [4c63d2b9] StatsFuns v1.4.0
⌅ [f3b207a7] StatsPlots v0.14.34
  [892a3eda] StringManipulation v0.4.1
  [ab02a1b2] TableOperations v1.2.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [62fd8b95] TensorCore v0.1.1
  [3bb67fe8] TranscodingStreams v0.11.3
  [5c2747f8] URIs v1.5.2
  [1cfade01] UnicodeFun v0.4.1
  [41fe7b60] Unzip v0.2.0
  [ea10d353] WeakRefStrings v1.4.2
  [cc8bc4a8] Widgets v0.6.7
⌅ [efce3f68] WoodburyMatrices v0.5.6
  [76eceee3] WorkerUtilities v1.6.1
⌅ [68821587] Arpack_jll v3.5.1+1
  [6e34b625] Bzip2_jll v1.0.9+0
  [83423d85] Cairo_jll v1.18.4+0
  [ee1fde0b] Dbus_jll v1.16.2+0
  [2702e6a9] EpollShim_jll v0.0.20230411+1
  [2e619515] Expat_jll v2.6.5+0
⌅ [b22a6f82] FFMPEG_jll v4.4.2+2
  [f5851436] FFTW_jll v3.3.11+0
  [a3f928ae] Fontconfig_jll v2.16.0+0
  [d7e528f0] FreeType2_jll v2.13.4+0
  [559328eb] FriBidi_jll v1.0.17+0
  [0656b61e] GLFW_jll v3.4.0+2
⌅ [d2c73de3] GR_jll v0.69.1+0
  [78b55507] Gettext_jll v0.21.0+0
⌃ [f8c6e375] Git_jll v2.36.1+2
⌃ [7746bdde] Glib_jll v2.82.4+0
  [3b182d85] Graphite2_jll v1.3.15+0
  [3c863552] Graphviz_jll v2.50.0+1
  [528830af] Gumbo_jll v0.10.2+0
  [2e76f6c2] HarfBuzz_jll v8.5.0+0
  [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0
  [aacddb02] JpegTurbo_jll v3.1.1+0
  [c1c5ebd0] LAME_jll v3.100.2+0
⌅ [88015f11] LERC_jll v3.0.0+1
  [1d63c593] LLVMOpenMP_jll v18.1.7+0
  [dd4b983a] LZO_jll v2.10.3+0
⌅ [e9f186c6] Libffi_jll v3.2.2+2
  [d4300ac3] Libgcrypt_jll v1.11.1+0
  [7e76a0d4] Libglvnd_jll v1.7.0+0
  [7add5ba3] Libgpg_error_jll v1.51.1+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [4b2f31a3] Libmount_jll v2.41.0+0
⌅ [89763e89] Libtiff_jll v4.4.0+0
  [38a345b3] Libuuid_jll v2.41.0+0
  [856f044c] MKL_jll v2025.0.1+1
  [e7412a2a] Ogg_jll v1.3.5+1
⌃ [9bd350c2] OpenSSH_jll v8.9.0+1
⌅ [458c3c95] OpenSSL_jll v1.1.23+1
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [91d4177d] Opus_jll v1.3.3+0
  [36c8627f] Pango_jll v1.56.1+0
  [30392449] Pixman_jll v0.44.2+0
  [ea2cea3b] Qt5Base_jll v5.15.3+2
  [f50d1b31] Rmath_jll v0.5.1+0
⌃ [a2964d1f] Wayland_jll v1.21.0+2
  [2381bf8a] Wayland_protocols_jll v1.36.0+0
  [02c8fc9c] XML2_jll v2.13.6+1
  [aed1982a] XSLT_jll v1.1.43+0
  [4f6342f7] Xorg_libX11_jll v1.8.6+3
  [0c0b7dd1] Xorg_libXau_jll v1.0.12+0
  [935fb764] Xorg_libXcursor_jll v1.2.3+0
  [a3789734] Xorg_libXdmcp_jll v1.1.5+0
  [1082639a] Xorg_libXext_jll v1.3.6+3
  [d091e8ba] Xorg_libXfixes_jll v6.0.0+0
  [a51aa0fd] Xorg_libXi_jll v1.8.2+0
  [d1454406] Xorg_libXinerama_jll v1.1.5+0
  [ec84b674] Xorg_libXrandr_jll v1.5.4+0
  [ea2f1a96] Xorg_libXrender_jll v0.9.11+1
  [14d82f49] Xorg_libpthread_stubs_jll v0.1.2+0
  [c7cfdc94] Xorg_libxcb_jll v1.17.0+3
  [cc61e674] Xorg_libxkbfile_jll v1.1.2+1
  [12413925] Xorg_xcb_util_image_jll v0.4.0+1
  [2def613f] Xorg_xcb_util_jll v0.4.0+1
  [975044d2] Xorg_xcb_util_keysyms_jll v0.4.0+1
  [0d47668e] Xorg_xcb_util_renderutil_jll v0.3.9+1
  [c22f9ab0] Xorg_xcb_util_wm_jll v0.4.1+1
  [35661453] Xorg_xkbcomp_jll v1.4.6+1
  [33bec58e] Xorg_xkeyboard_config_jll v2.39.0+0
  [c5fb5394] Xorg_xtrans_jll v1.6.0+0
  [3161d3a3] Zstd_jll v1.5.7+1
  [214eeab7] fzf_jll v0.56.3+0
  [a4ae2306] libaom_jll v3.11.0+0
  [0ac62f75] libass_jll v0.15.2+0
  [1183f4f0] libdecor_jll v0.2.2+0
  [f638f0a6] libfdk_aac_jll v2.0.3+0
  [b53b4c65] libpng_jll v1.6.47+0
  [47bcb7c8] libsass_jll v3.6.6+0
  [f27f6e37] libvorbis_jll v1.3.7+2
  [1317d2d5] oneTBB_jll v2022.0.0+0
⌅ [cf2c5f97] pprof_jll v1.0.1+0
⌅ [1270edf5] x264_jll v2021.5.5+0
⌅ [dfaa095f] x265_jll v3.5.0+0
  [d8fb68d0] xkbcommon_jll v1.4.1+2
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [9abbd945] Profile v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [05823500] OpenLibm_jll v0.8.5+0
  [efcefdf7] PCRE2_jll v10.42.0+1
  [bea87d4a] SuiteSparse_jll v7.7.0+0
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
Precompiling DistributionsTestExt...
   5912.2 ms  ✓ Distributions → DistributionsTestExt
  1 dependency successfully precompiled in 10 seconds. 48 already precompiled.
Test Summary:  | Pass  Total  Time
readFastq test |    9      9  1.7s
Test Summary:    | Pass  Total  Time
demultiplex test |    5      5  0.9s
     Testing Nucleotide_Essentials tests passed 

Testing completed after 52.37s

PkgEval succeeded after 642.84s