Package evaluation of MimiGIVE on Julia 1.11.4 (a71dd056e0*) started at 2025-04-09T01:46:58.320 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.19s ################################################################################ # Installation # Installing MimiGIVE... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [08b927d4] + MimiGIVE v2.2.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [69666777] + Arrow v2.8.0 [31f734f8] + ArrowTypes v2.3.0 [13072b0f] + AxisAlgorithms v1.1.0 [d1d4a3ce] + BitFlags v0.1.9 [c3b6d118] + BitIntegers v0.3.5 [e1450e63] + BufferedStreams v1.2.2 [336ed68f] + CSV v0.10.15 [5d742f6a] + CSVFiles v1.0.2 [324d7699] + CategoricalArrays v0.10.8 [d360d2e6] + ChainRulesCore v1.25.1 [1a9c1350] + Classes v1.4.1 [6309b1aa] + CodecInflate64 v0.1.3 [5ba52731] + CodecLz4 v0.4.6 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.6 [35d6a980] + ColorSchemes v3.29.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.0 [861a8166] + Combinatorics v1.0.2 [34da2185] + Compat v4.16.0 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.5.8 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [e7dc6d0d] + DataValues v0.4.13 [8bb1440f] + DelimitedFiles v1.9.1 ⌅ [3c3547ce] + DiskArrays v0.3.23 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.4 [e30172f5] + Documenter v1.10.1 [497a8b3b] + DoubleFloats v1.4.3 ⌅ [a1bb12fb] + Electron v5.1.0 [4e289a0a] + EnumX v1.0.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [e2ba6199] + ExprTools v0.1.10 [8f5d6c58] + EzXML v1.2.1 [c87230d0] + FFMPEG v0.4.2 [7a1cc6ca] + FFTW v1.8.1 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [28b8d3ca] + GR v0.73.13 [14197337] + GenericLinearAlgebra v0.3.15 [d7ba0133] + Git v1.3.1 [1b10255b] + GlobalSensitivityAnalysis v1.2.0 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.15 [34004b35] + HypergeometricFunctions v0.3.28 [b5f81e59] + IOCapture v0.2.5 [842dd82b] + InlineStrings v1.4.3 [0c81fc1b] + InputBuffers v1.0.1 [a98d9a8b] + Interpolations v0.15.1 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [1c8ee90f] + IterableTables v1.0.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [1019f520] + JLFzf v0.1.10 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.2 [7d188eb4] + JSONSchema v1.4.1 [5ab0869b] + KernelDensity v0.6.9 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.7 [0e77f7df] + LazilyInitializedFields v1.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [6e857e4b] + MCMCDiagnostics v0.4.0 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 [d0879d2d] + MarkdownAST v0.1.2 [739be429] + MbedTLS v1.1.9 [442fdcdd] + Measures v0.3.2 [e4e893b0] + Mimi v1.5.3 [91f4afc7] + MimiBRICK v1.0.1 [b45ee815] + MimiCIAM v1.0.1 [02cc1f66] + MimiFAIRv1_6_2 v1.0.1 [08b927d4] + MimiGIVE v2.2.0 [20e4a6fe] + MimiMooreEtAlAgricultureImpacts v2.0.0 [2561df7e] + MimiRFFSPs v1.1.2 [3f1801d0] + MimiSNEASY v1.0.2 [d73ed964] + MimiSSPs v1.0.2 [113fc11f] + Mimi_NAS_pH v1.0.0 [e1d29d7a] + Missings v1.2.0 [78c3b35d] + Mocking v0.8.1 [77ba4419] + NaNMath v1.1.3 [86f7a689] + NamedArrays v0.10.3 ⌅ [30363a11] + NetCDF v0.11.8 [2bd173c7] + NodeJS v2.0.0 [4d1e1d77] + Nullables v1.0.0 [6fe1bfb0] + OffsetArrays v1.16.0 [4d8831e6] + OpenSSL v1.4.3 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.33 [69de0a69] + Parsers v2.8.1 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.3 [91a5bcdd] + Plots v1.40.11 [f27b6e38] + Polynomials v4.0.19 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [be4d8f0f] + Quadmath v0.5.11 [1a8c2f83] + Query v1.0.0 [2aef5ad7] + QueryOperators v0.9.3 [df47a6cb] + RData v1.0.0 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [189a3867] + Reexport v1.2.2 [2792f1a3] + RegistryInstances v0.1.0 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [2f96e190] + RobustAdaptiveMetropolisSampler v1.1.0 [6c6a2e73] + Scratch v1.2.1 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [ed01d8cd] + Sobol v1.5.0 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [860ef19b] + StableRNGs v1.0.2 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.4.0 ⌅ [db12335b] + StringBuilders v0.2.4 [892a3eda] + StringManipulation v0.4.1 [354b36f9] + StringViews v1.3.4 [856f2bd8] + StructTypes v1.11.0 [dc5dba14] + TZJData v1.5.0+2025b [5e66a065] + TableShowUtils v0.2.6 [3783bdb8] + TableTraits v1.0.1 [382cd787] + TableTraitsUtils v1.0.2 [bd369af6] + Tables v1.12.0 [62fd8b95] + TensorCore v0.1.1 [e0df1984] + TextParse v1.0.3 [f269a46b] + TimeZones v1.21.3 [3bb67fe8] + TranscodingStreams v0.11.3 [592b5752] + Trapz v2.0.3 [30578b45] + URIParser v0.4.1 [5c2747f8] + URIs v1.5.2 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.22.0 [45397f5d] + UnitfulLatexify v1.6.4 [41fe7b60] + Unzip v0.2.0 [239c3e63] + Vega v2.7.0 [112f6efa] + VegaLite v3.3.0 [ea10d353] + WeakRefStrings v1.4.2 [efce3f68] + WoodburyMatrices v1.0.0 [76eceee3] + WorkerUtilities v1.6.1 [fdbf4ff8] + XLSX v0.10.4 [49080126] + ZipArchives v2.4.1 [a5390f91] + ZipFile v0.10.1 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.4+0 [ee1fde0b] + Dbus_jll v1.16.2+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [2e619515] + Expat_jll v2.6.5+0 ⌅ [b22a6f82] + FFMPEG_jll v4.4.4+1 [f5851436] + FFTW_jll v3.3.11+0 [a3f928ae] + Fontconfig_jll v2.16.0+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [0656b61e] + GLFW_jll v3.4.0+2 [d2c73de3] + GR_jll v0.73.13+0 [78b55507] + Gettext_jll v0.21.0+0 [f8c6e375] + Git_jll v2.49.0+0 ⌃ [7746bdde] + Glib_jll v2.82.4+0 [3b182d85] + Graphite2_jll v1.3.15+0 ⌅ [0234f1f7] + HDF5_jll v1.14.3+3 [2e76f6c2] + HarfBuzz_jll v8.5.0+0 [e33a78d0] + Hwloc_jll v2.12.0+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [aacddb02] + JpegTurbo_jll v3.1.1+0 [c1c5ebd0] + LAME_jll v3.100.2+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.7+0 [dd4b983a] + LZO_jll v2.10.3+0 ⌅ [e9f186c6] + Libffi_jll v3.2.2+2 [d4300ac3] + Libgcrypt_jll v1.11.1+0 [7e76a0d4] + Libglvnd_jll v1.7.0+0 [7add5ba3] + Libgpg_error_jll v1.51.1+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.0+0 [89763e89] + Libtiff_jll v4.7.1+0 [38a345b3] + Libuuid_jll v2.41.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [856f044c] + MKL_jll v2025.0.1+1 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 ⌅ [7243133f] + NetCDF_jll v400.902.211+1 [e7412a2a] + Ogg_jll v1.3.5+1 ⌅ [fe0851c0] + OpenMPI_jll v4.1.8+1 [458c3c95] + OpenSSL_jll v3.0.16+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.3.3+0 [36c8627f] + Pango_jll v1.56.1+0 [30392449] + Pixman_jll v0.44.2+0 ⌅ [c0090381] + Qt6Base_jll v6.7.1+1 ⌅ [629bc702] + Qt6Declarative_jll v6.7.1+2 ⌅ [ce943373] + Qt6ShaderTools_jll v6.7.1+1 ⌃ [e99dba38] + Qt6Wayland_jll v6.7.1+1 [f50d1b31] + Rmath_jll v0.5.1+0 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 ⌃ [a2964d1f] + Wayland_jll v1.21.0+2 [2381bf8a] + Wayland_protocols_jll v1.36.0+0 [02c8fc9c] + XML2_jll v2.13.6+1 [aed1982a] + XSLT_jll v1.1.43+0 [ffd25f8a] + XZ_jll v5.8.1+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.4+0 [4f6342f7] + Xorg_libX11_jll v1.8.6+3 [0c0b7dd1] + Xorg_libXau_jll v1.0.12+0 [935fb764] + Xorg_libXcursor_jll v1.2.3+0 [a3789734] + Xorg_libXdmcp_jll v1.1.5+0 [1082639a] + Xorg_libXext_jll v1.3.6+3 [d091e8ba] + Xorg_libXfixes_jll v6.0.0+0 [a51aa0fd] + Xorg_libXi_jll v1.8.2+0 [d1454406] + Xorg_libXinerama_jll v1.1.5+0 [ec84b674] + Xorg_libXrandr_jll v1.5.4+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.11+1 [14d82f49] + Xorg_libpthread_stubs_jll v0.1.2+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.0+3 [cc61e674] + Xorg_libxkbfile_jll v1.1.2+1 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.4+0 [12413925] + Xorg_xcb_util_image_jll v0.4.0+1 [2def613f] + Xorg_xcb_util_jll v0.4.0+1 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.0+1 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.9+1 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.1+1 [35661453] + Xorg_xkbcomp_jll v1.4.6+1 [33bec58e] + Xorg_xkeyboard_config_jll v2.39.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 [35ca27e7] + eudev_jll v3.2.9+0 [214eeab7] + fzf_jll v0.56.3+0 [1a1c6b14] + gperf_jll v3.1.1+1 [477f73a3] + libaec_jll v1.1.3+0 [a4ae2306] + libaom_jll v3.11.0+0 [0ac62f75] + libass_jll v0.15.2+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.11.0+0 [f638f0a6] + libfdk_aac_jll v2.0.3+0 [36db933b] + libinput_jll v1.18.0+0 [b53b4c65] + libpng_jll v1.6.47+0 [f27f6e37] + libvorbis_jll v1.3.7+2 [337d8026] + libzip_jll v1.11.3+0 [009596ad] + mtdev_jll v1.1.6+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 ⌅ [1270edf5] + x264_jll v2021.5.5+0 ⌅ [dfaa095f] + x265_jll v3.5.0+0 [d8fb68d0] + xkbcommon_jll v1.4.1+2 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [efcefdf7] + PCRE2_jll v10.42.0+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 9.19s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 331.24s ################################################################################ # Testing # Testing MimiGIVE Status `/tmp/jl_U6V5z2/Project.toml` [5d742f6a] CSVFiles v1.0.2 [a93c6f00] DataFrames v1.7.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.118 [5789e2e9] FileIO v1.17.0 [a98d9a8b] Interpolations v0.15.1 [682c06a0] JSON v0.21.4 [e4e893b0] Mimi v1.5.3 [91f4afc7] MimiBRICK v1.0.1 [b45ee815] MimiCIAM v1.0.1 [02cc1f66] MimiFAIRv1_6_2 v1.0.1 [08b927d4] MimiGIVE v2.2.0 [20e4a6fe] MimiMooreEtAlAgricultureImpacts v2.0.0 [2561df7e] MimiRFFSPs v1.1.2 [d73ed964] MimiSSPs v1.0.2 [113fc11f] Mimi_NAS_pH v1.0.0 ⌅ [30363a11] NetCDF v0.11.8 [90014a1f] PDMats v0.11.33 [1a8c2f83] Query v1.0.0 ⌅ [2913bbd2] StatsBase v0.33.21 [fdbf4ff8] XLSX v0.10.4 [ade2ca70] Dates v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_U6V5z2/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [69666777] Arrow v2.8.0 [31f734f8] ArrowTypes v2.3.0 [13072b0f] AxisAlgorithms v1.1.0 [d1d4a3ce] BitFlags v0.1.9 [c3b6d118] BitIntegers v0.3.5 [e1450e63] BufferedStreams v1.2.2 [336ed68f] CSV v0.10.15 [5d742f6a] CSVFiles v1.0.2 [324d7699] CategoricalArrays v0.10.8 [d360d2e6] ChainRulesCore v1.25.1 [1a9c1350] Classes v1.4.1 [6309b1aa] CodecInflate64 v0.1.3 [5ba52731] CodecLz4 v0.4.6 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.6 [35d6a980] ColorSchemes v3.29.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.0 [861a8166] Combinatorics v1.0.2 [34da2185] Compat v4.16.0 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.5.8 [d38c429a] Contour v0.6.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [e7dc6d0d] DataValues v0.4.13 [8bb1440f] DelimitedFiles v1.9.1 ⌅ [3c3547ce] DiskArrays v0.3.23 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [e30172f5] Documenter v1.10.1 [497a8b3b] DoubleFloats v1.4.3 ⌅ [a1bb12fb] Electron v5.1.0 [4e289a0a] EnumX v1.0.5 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [8f5d6c58] EzXML v1.2.1 [c87230d0] FFMPEG v0.4.2 [7a1cc6ca] FFTW v1.8.1 [5789e2e9] FileIO v1.17.0 ⌅ [8fc22ac5] FilePaths v0.8.3 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [28b8d3ca] GR v0.73.13 [14197337] GenericLinearAlgebra v0.3.15 [d7ba0133] Git v1.3.1 [1b10255b] GlobalSensitivityAnalysis v1.2.0 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.15 [34004b35] HypergeometricFunctions v0.3.28 [b5f81e59] IOCapture v0.2.5 [842dd82b] InlineStrings v1.4.3 [0c81fc1b] InputBuffers v1.0.1 [a98d9a8b] Interpolations v0.15.1 [41ab1584] 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ┌ Warning: MCMCDiagnostics.jl has been deprecated in favor of MCMCDiagnosticTools.jl. │ (https://github.com/TuringLang/MCMCDiagnosticTools.jl/) and is no longer │ maintained. └ @ MCMCDiagnostics ~/.julia/packages/MCMCDiagnostics/uVCwA/src/MCMCDiagnostics.jl:4 [ Info: test_get_model.jl 7-Zip (a) [64] 17.04 : Copyright (c) 1999-2021 Igor Pavlov : 2017-08-28 p7zip Version 17.04 (locale=C.UTF-8,Utf16=on,HugeFiles=on,64 bits,128 CPUs AMD EPYC 7502 32-Core Processor (830F10),ASM,AES-NI) Scanning the drive for archives: 1 file, 1463746779 bytes (1396 MiB) Extracting archive: /home/pkgeval/.julia/scratchspaces/124859b0-ceae-595e-8997-d05f6a7a8dfe/datadeps/rffsps_v5/rffsps_v5.7z -- Path = /home/pkgeval/.julia/scratchspaces/124859b0-ceae-595e-8997-d05f6a7a8dfe/datadeps/rffsps_v5/rffsps_v5.7z Type = 7z Physical Size = 1463746779 Headers Size = 89555 Method = LZMA2:26 Solid = + Blocks = 1 Everything is Ok Folders: 5 Files: 11007 Size: 2722558660 Compressed: 1463746779 ┌ Warning: `LinearInterpolation(args...; kwargs...)` is deprecated, use `linear_interpolation(args...; kwargs...)` instead. │ caller = macro expansion at SPs.jl:93 [inlined] └ @ Core ~/.julia/packages/MimiRFFSPs/VcWdk/src/components/SPs.jl:93 ┌ Warning: `LinearInterpolation(args...; kwargs...)` is deprecated, use `linear_interpolation(args...; kwargs...)` instead. │ caller = macro expansion at SPs.jl:94 [inlined] └ @ Core ~/.julia/packages/MimiRFFSPs/VcWdk/src/components/SPs.jl:94 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 231 running 1 of 1 signal (10): User defined signal 1 pthread_sigmask at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) sigprocmask at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) put_rs_cache at /opt/julia/bin/../lib/julia/libunwind.so.8 (unknown line) find_reg_state at /opt/julia/bin/../lib/julia/libunwind.so.8 (unknown line) _ULx86_64_dwarf_step at /opt/julia/bin/../lib/julia/libunwind.so.8 (unknown line) _ULx86_64_step at /opt/julia/bin/../lib/julia/libunwind.so.8 (unknown line) jl_unw_step at /source/src/stackwalk.c:559 [inlined] jl_unw_stepn at /source/src/stackwalk.c:99 ijl_backtrace_from_here at /source/src/stackwalk.c:270 backtrace at ./error.jl:114 macro expansion at ./deprecated.jl:159 [inlined] macro expansion at ./logging/logging.jl:399 [inlined] _depwarn at ./deprecated.jl:155 unknown function (ip: 0x70cd6c5496d0) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 #invokelatest#2 at ./essentials.jl:1055 [inlined] invokelatest at ./essentials.jl:1052 [inlined] #depwarn#1188 at ./deprecated.jl:146 [inlined] depwarn at ./deprecated.jl:141 [inlined] #LinearInterpolation#60 at ./deprecated.jl:104 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_apply at /source/src/builtins.c:831 LinearInterpolation at ./deprecated.jl:103 macro expansion at /home/pkgeval/.julia/packages/MimiRFFSPs/VcWdk/src/components/SPs.jl:94 [inlined] init_MimiRFFSPs_SPs at /home/pkgeval/.julia/packages/Mimi/ve6WQ/src/core/defcomp.jl:91 unknown function (ip: 0x70cd6c8ecf8d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 init at /home/pkgeval/.julia/packages/Mimi/ve6WQ/src/core/instances.jl:281 unknown function (ip: 0x70cd6c8d1fd6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 init at /home/pkgeval/.julia/packages/Mimi/ve6WQ/src/core/instances.jl:288 unknown function (ip: 0x70cd6c8d0756) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 run at /home/pkgeval/.julia/packages/Mimi/ve6WQ/src/core/instances.jl:363 #run#224 at /home/pkgeval/.julia/packages/Mimi/ve6WQ/src/core/model.jl:539 run at /home/pkgeval/.julia/packages/Mimi/ve6WQ/src/core/model.jl:527 [inlined] top-level scope at /home/pkgeval/.julia/packages/MimiGIVE/YpyHF/test/test_get_model.jl:101 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_invoke at /source/src/gf.c:2955 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_eval_module_expr at /source/src/toplevel.c:215 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:743 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 [inlined] macro expansion at ./timing.jl:581 [inlined] macro expansion at /home/pkgeval/.julia/packages/MimiGIVE/YpyHF/test/runtests.jl:7 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] top-level scope at /home/pkgeval/.julia/packages/MimiGIVE/YpyHF/test/runtests.jl:6 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_invoke at /source/src/gf.c:2955 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x70cd8d300082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x70cd8e689249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000070cd81000010 Total snapshots: 164. Utilization: 100% ╎111 @Base/client.jl:531; _start() ╎ 111 @Base/client.jl:296; exec_options(opts::Base.JLOptions) ╎ 111 @Base/boot.jl:430; eval ╎ 111 @Base/sysimg.jl:38; include(fname::String) ╎ 111 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _pat… ╎ 111 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mo… ╎ ╎ 111 @Base/boot.jl:430; eval ╎ ╎ 111 …GIVE/test/runtests.jl:6; top-level scope ╎ ╎ 111 @Test/src/Test.jl:1704; macro expansion ╎ ╎ 111 …IVE/test/runtests.jl:7; macro expansion ╎ ╎ 111 @Base/timing.jl:581; macro expansion ╎ ╎ ╎ 111 @Base/sysimg.jl:38; include ╎ ╎ ╎ 111 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Modu… ╎ ╎ ╎ 111 @Base/loading.jl:2734; include_string(mapexpr::typeof(ident… ╎ ╎ ╎ 111 @Base/boot.jl:430; eval ╎ ╎ ╎ 111 …test_get_model.jl:101; top-level scope ╎ ╎ ╎ ╎ 111 …rc/core/model.jl:527; run ╎ ╎ ╎ ╎ 111 …rc/core/model.jl:539; run(m::Mimi.Model; ntimesteps::I… ╎ ╎ ╎ ╎ 111 …re/instances.jl:363; run(mi::Mimi.ModelInstance, ntim… ╎ ╎ ╎ ╎ 111 …re/instances.jl:288; init(obj::Mimi.ModelInstance, d… ╎ ╎ ╎ ╎ 111 …re/instances.jl:281; init(ci::Mimi.LeafComponentIns… ╎ ╎ ╎ ╎ ╎ 111 …core/defcomp.jl:91; init_MimiRFFSPs_SPs(p::Mimi.Co… ╎ ╎ ╎ ╎ ╎ 58 …ponents/SPs.jl:93; macro expansion ╎ ╎ ╎ ╎ ╎ 58 …deprecated.jl:103; LinearInterpolation(::Vector{… ╎ ╎ ╎ ╎ ╎ 58 …deprecated.jl:104; LinearInterpolation(::Vector… ╎ ╎ ╎ ╎ ╎ 58 …deprecated.jl:141; depwarn ╎ ╎ ╎ ╎ ╎ ╎ 58 …eprecated.jl:146; #depwarn#1188 ╎ ╎ ╎ ╎ ╎ ╎ 58 …sentials.jl:1052; invokelatest ╎ ╎ ╎ ╎ ╎ ╎ 58 …sentials.jl:1055; #invokelatest#2 ╎ ╎ ╎ ╎ ╎ ╎ 58 …precated.jl:155; _depwarn(msg::Any, funcsy… ╎ ╎ ╎ ╎ ╎ ╎ 58 …/logging.jl:399; macro expansion ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 …precated.jl:159; macro expansion 2╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 …se/error.jl:114; backtrace() ╎ ╎ ╎ ╎ ╎ ╎ ╎ 56 …precated.jl:160; macro expansion ╎ ╎ ╎ ╎ ╎ ╎ ╎ 56 …precated.jl:180; firstcaller ╎ ╎ ╎ ╎ ╎ ╎ ╎ 56 …precated.jl:185; firstcaller 55╎ ╎ ╎ ╎ ╎ ╎ ╎ 55 …cktraces.jl:108; lookup(pointer::Ptr{… 1╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 …cktraces.jl:115; lookup(pointer::Ptr{… ╎ ╎ ╎ ╎ ╎ 53 …ponents/SPs.jl:94; macro expansion ╎ ╎ ╎ ╎ ╎ 53 …deprecated.jl:103; LinearInterpolation(::Vector{… ╎ ╎ ╎ ╎ ╎ 53 …deprecated.jl:104; LinearInterpolation(::Vector… ╎ ╎ ╎ ╎ ╎ 53 …deprecated.jl:141; depwarn ╎ ╎ ╎ ╎ ╎ ╎ 53 …eprecated.jl:146; #depwarn#1188 ╎ ╎ ╎ ╎ ╎ ╎ 53 …sentials.jl:1052; invokelatest ╎ ╎ ╎ ╎ ╎ ╎ 53 …sentials.jl:1055; #invokelatest#2 ╎ ╎ ╎ ╎ ╎ ╎ 53 …precated.jl:155; _depwarn(msg::Any, funcsy… ╎ ╎ ╎ ╎ ╎ ╎ 53 …/logging.jl:399; macro expansion ╎ ╎ ╎ ╎ ╎ ╎ ╎ 4 …precated.jl:159; macro expansion 4╎ ╎ ╎ ╎ ╎ ╎ ╎ 4 …se/error.jl:114; backtrace() ╎ ╎ ╎ ╎ ╎ ╎ ╎ 49 …precated.jl:160; macro expansion ╎ ╎ ╎ ╎ ╎ ╎ ╎ 49 …precated.jl:180; firstcaller ╎ ╎ ╎ ╎ ╎ ╎ ╎ 49 …precated.jl:185; firstcaller 48╎ ╎ ╎ ╎ ╎ ╎ ╎ 49 …cktraces.jl:108; lookup(pointer::Ptr{… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x77f203ae80c2) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2142 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2082 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x77f203ae085d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1837 unknown function (ip: 0x77f203ad4e1a) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x77f203ad4b1d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x77f203ad450d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x77f203ad09b6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x77f204b17249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000077f1f7400010 Total snapshots: 8. Utilization: 0% ╎8 @Base/client.jl:531; _start() ╎ 8 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 8 @Base/Base.jl:557; include(mod::Module, _path::String) ╎ 8 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path::S… ╎ 8 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod::M… ╎ 8 @Base/boot.jl:430; eval ╎ ╎ 8 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 8 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 8 @Pkg/src/API.jl:147; test ╎ ╎ 8 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 8 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ ╎ 8 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec}; i… ╎ ╎ ╎ 8 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io::… ╎ ╎ ╎ 8 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vector… ╎ ╎ ╎ 8 …/src/Operations.jl:2007; test ╎ ╎ ╎ 8 …src/Operations.jl:2063; test(ctx::Pkg.Types.Context, pkgs::… ╎ ╎ ╎ ╎ 8 …src/Operations.jl:1837; kwcall(::@NamedTuple{preferences::… ╎ ╎ ╎ ╎ 8 …src/Operations.jl:1845; #sandbox#115 ╎ ╎ ╎ ╎ 8 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 8 @Base/file.jl:815; mktempdir(fn::Function, parent::Strin… ╎ ╎ ╎ ╎ 8 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#11… ╎ ╎ ╎ ╎ ╎ 8 …c/Operations.jl:1898; (::Pkg.Operations.var"#116#121"… ╎ ╎ ╎ ╎ ╎ 8 …c/Operations.jl:1789; with_temp_env(fn::Pkg.Operatio… ╎ ╎ ╎ ╎ ╎ 8 …/Operations.jl:1931; (::Pkg.Operations.var"#118#123… ╎ ╎ ╎ ╎ ╎ 8 @Base/env.jl:265; withenv(::Pkg.Operations.var"#131… ╎ ╎ ╎ ╎ ╎ 8 …Operations.jl:2082; (::Pkg.Operations.var"#131#13… ╎ ╎ ╎ ╎ ╎ ╎ 8 …Operations.jl:2142; subprocess_handler(cmd::Cmd,… ╎ ╎ ╎ ╎ ╎ ╎ 8 …se/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 8 …se/process.jl:694; wait(x::Base.Process, syncd… ╎ ╎ ╎ ╎ ╎ ╎ 8 …condition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 8 …condition.jl:130; wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 8 …ase/task.jl:1021; wait() 7╎ ╎ ╎ ╎ ╎ ╎ ╎ 8 …ase/task.jl:1012; poptask(W::Base.Intrusiv… [231] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/MimiGIVE/YpyHF/test/test_get_model.jl:99 PkgEval terminated after 2721.88s: test duration exceeded the time limit