Package evaluation of MetaPhylo on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T11:12:40.813


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.88s


################################################################################
# Installation
#

Installing MetaPhylo...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [58946fd8] + MetaPhylo v0.1.1
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
  [ec485272] + ArnoldiMethod v0.4.0
  [39de3d68] + AxisArrays v0.4.7
  [34da2185] + Compat v4.16.0
  [864edb3b] + DataStructures v0.18.22
  [5789e2e9] + FileIO v1.17.0
  [86223c79] + Graphs v1.12.1
  [d25df0c9] + Inflate v0.1.5
  [8197267c] + IntervalSets v0.7.10
  [c8e1da08] + IterTools v1.10.0
⌅ [033835bb] + JLD2 v0.4.54
  [d42ef402] + Lerche v0.5.6
  [1914dd2f] + MacroTools v0.5.15
  [58946fd8] + MetaPhylo v0.1.1
  [d9ec5142] + NamedTupleTools v0.14.3
  [bac558e1] + OrderedCollections v1.8.0
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [b3c3ace0] + RangeArrays v0.3.2
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [699a6c99] + SimpleTraits v0.9.4
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
  [4c8beaf5] + StaticGraphs v0.3.0
  [10745b16] + Statistics v1.11.1
  [3bb67fe8] + TranscodingStreams v0.11.3
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.6.0+0
  [e37daf67] + LibGit2_jll v1.7.2+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.6+0
  [14a3606d] + MozillaCACerts_jll v2023.12.12
  [4536629a] + OpenBLAS_jll v0.3.27+1
  [bea87d4a] + SuiteSparse_jll v7.7.0+0
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.59.0+0
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 2.37s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 81.61s


################################################################################
# Testing
#

     Testing MetaPhylo
      Status `/tmp/jl_8Ruq80/Project.toml`
  [1520ce14] AbstractTrees v0.4.5
  [39de3d68] AxisArrays v0.4.7
  [86223c79] Graphs v1.12.1
  [d42ef402] Lerche v0.5.6
  [58946fd8] MetaPhylo v0.1.1
  [d9ec5142] NamedTupleTools v0.14.3
  [189a3867] Reexport v1.2.2
  [4c8beaf5] StaticGraphs v0.3.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_8Ruq80/Manifest.toml`
  [1520ce14] AbstractTrees v0.4.5
  [ec485272] ArnoldiMethod v0.4.0
  [39de3d68] AxisArrays v0.4.7
  [34da2185] Compat v4.16.0
  [864edb3b] DataStructures v0.18.22
  [5789e2e9] FileIO v1.17.0
  [86223c79] Graphs v1.12.1
  [d25df0c9] Inflate v0.1.5
  [8197267c] IntervalSets v0.7.10
  [c8e1da08] IterTools v1.10.0
⌅ [033835bb] JLD2 v0.4.54
  [d42ef402] Lerche v0.5.6
  [1914dd2f] MacroTools v0.5.15
  [58946fd8] MetaPhylo v0.1.1
  [d9ec5142] NamedTupleTools v0.14.3
  [bac558e1] OrderedCollections v1.8.0
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [b3c3ace0] RangeArrays v0.3.2
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [699a6c99] SimpleTraits v0.9.4
  [90137ffa] StaticArrays v1.9.13
  [1e83bf80] StaticArraysCore v1.4.3
  [4c8beaf5] StaticGraphs v0.3.0
  [10745b16] Statistics v1.11.1
  [3bb67fe8] TranscodingStreams v0.11.3
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [bea87d4a] SuiteSparse_jll v7.7.0+0
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Test Summary:    | Pass  Total   Time
newick/newick.jl |   19     19  12.3s
Test Summary: | Pass  Total  Time
indexing.jl   |   20     20  4.4s
Test Summary: | Pass  Total  Time
interfaces.jl |   97     97  9.5s
Test Summary: | Pass  Total  Time
distance.jl   |   14     14  4.3s
show.jl: Test Failed at /home/pkgeval/.julia/packages/MetaPhylo/2I5Mk/test/runtests.jl:217
  Expression: sprint(show, freezed_tree) == "MetaPhylo.StaticTree with 6 leaves.\n    Rooted: false\n    branch_data: NamedTuple{(:length,), Tuple{Float64}}\n    node_data: NamedTuple{(), Tuple{}}"
   Evaluated: "MetaPhylo.StaticTree with 6 leaves.\n    Rooted: false\n    branch_data: @NamedTuple{length::Float64}\n    node_data: @NamedTuple{}" == "MetaPhylo.StaticTree with 6 leaves.\n    Rooted: false\n    branch_data: NamedTuple{(:length,), Tuple{Float64}}\n    node_data: NamedTuple{(), Tuple{}}"

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/MetaPhylo/2I5Mk/test/runtests.jl:217 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/MetaPhylo/2I5Mk/test/runtests.jl:194
Test Summary: | Pass  Fail  Total  Time
show.jl       |    3     1      4  5.0s
ERROR: LoadError: Some tests did not pass: 3 passed, 1 failed, 0 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/MetaPhylo/2I5Mk/test/runtests.jl:193

Testing failed after 67.07s

ERROR: LoadError: Package MetaPhylo errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2124
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:219
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 172.24s: package has test failures