Package evaluation of MarkovChainHammer on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T16:36:55.334


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.07s


################################################################################
# Installation
#

Installing MarkovChainHammer...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [38c40fd0] + MarkovChainHammer v0.0.12
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [a4c015fc] + ANSIColoredPrinters v0.0.1
  [1520ce14] + AbstractTrees v0.4.5
  [66dad0bd] + AliasTables v1.1.3
  [da1fd8a2] + CodeTracking v1.3.9
  [34da2185] + Compat v4.16.0
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.22
  [31c24e10] + Distributions v0.25.118
  [ffbed154] + DocStringExtensions v0.9.4
⌅ [e30172f5] + Documenter v0.27.25
  [35a29f4d] + DocumenterTools v0.1.20
  [1a297f60] + FillArrays v1.13.0
  [d7ba0133] + Git v1.3.1
  [708ec375] + Gumbo v0.8.3
  [34004b35] + HypergeometricFunctions v0.3.28
  [b5f81e59] + IOCapture v0.2.5
  [92d709cd] + IrrationalConstants v0.2.4
  [692b3bcd] + JLLWrappers v1.7.0
  [682c06a0] + JSON v0.21.4
  [aa1ae85d] + JuliaInterpreter v0.9.42
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [6f1432cf] + LoweredCodeUtils v3.1.0
  [38c40fd0] + MarkovChainHammer v0.0.12
  [e1d29d7a] + Missings v1.2.0
  [bac558e1] + OrderedCollections v1.8.0
  [90014a1f] + PDMats v0.11.33
  [69de0a69] + Parsers v2.8.1
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [49802e3a] + ProgressBars v1.5.1
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [295af30f] + Revise v3.7.3
  [79098fc4] + Rmath v0.8.0
  [322a6be2] + Sass v0.2.0
  [a2af1166] + SortingAlgorithms v1.2.1
  [276daf66] + SpecialFunctions v2.5.0
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.0
  [2913bbd2] + StatsBase v0.34.4
  [4c63d2b9] + StatsFuns v1.4.0
  [2e619515] + Expat_jll v2.6.5+0
  [f8c6e375] + Git_jll v2.49.0+0
  [528830af] + Gumbo_jll v0.10.2+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [9bd350c2] + OpenSSH_jll v9.9.2+0
  [458c3c95] + OpenSSL_jll v3.0.16+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [47bcb7c8] + libsass_jll v3.6.6+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.11.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.6.0+0
  [e37daf67] + LibGit2_jll v1.7.2+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.6+0
  [14a3606d] + MozillaCACerts_jll v2023.12.12
  [4536629a] + OpenBLAS_jll v0.3.27+1
  [05823500] + OpenLibm_jll v0.8.5+0
  [efcefdf7] + PCRE2_jll v10.42.0+1
  [bea87d4a] + SuiteSparse_jll v7.7.0+0
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.59.0+0
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 4.77s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 53.11s


################################################################################
# Testing
#

     Testing MarkovChainHammer
      Status `/tmp/jl_iWMKtu/Project.toml`
  [31c24e10] Distributions v0.25.118
⌅ [e30172f5] Documenter v0.27.25
  [35a29f4d] DocumenterTools v0.1.20
  [38c40fd0] MarkovChainHammer v0.0.12
⌅ [aea7be01] PrecompileTools v1.2.1
  [49802e3a] ProgressBars v1.5.1
  [189a3867] Reexport v1.2.2
  [295af30f] Revise v3.7.3
  [10745b16] Statistics v1.11.1
  [37e2e46d] LinearAlgebra v1.11.0
  [9a3f8284] Random v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_iWMKtu/Manifest.toml`
  [a4c015fc] ANSIColoredPrinters v0.0.1
  [1520ce14] AbstractTrees v0.4.5
  [66dad0bd] AliasTables v1.1.3
  [da1fd8a2] CodeTracking v1.3.9
  [34da2185] Compat v4.16.0
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [31c24e10] Distributions v0.25.118
  [ffbed154] DocStringExtensions v0.9.4
⌅ [e30172f5] Documenter v0.27.25
  [35a29f4d] DocumenterTools v0.1.20
  [1a297f60] FillArrays v1.13.0
  [d7ba0133] Git v1.3.1
  [708ec375] Gumbo v0.8.3
  [34004b35] HypergeometricFunctions v0.3.28
  [b5f81e59] IOCapture v0.2.5
  [92d709cd] IrrationalConstants v0.2.4
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [aa1ae85d] JuliaInterpreter v0.9.42
  [2ab3a3ac] LogExpFunctions v0.3.29
  [6f1432cf] LoweredCodeUtils v3.1.0
  [38c40fd0] MarkovChainHammer v0.0.12
  [e1d29d7a] Missings v1.2.0
  [bac558e1] OrderedCollections v1.8.0
  [90014a1f] PDMats v0.11.33
  [69de0a69] Parsers v2.8.1
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [49802e3a] ProgressBars v1.5.1
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [295af30f] Revise v3.7.3
  [79098fc4] Rmath v0.8.0
  [322a6be2] Sass v0.2.0
  [a2af1166] SortingAlgorithms v1.2.1
  [276daf66] SpecialFunctions v2.5.0
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [4c63d2b9] StatsFuns v1.4.0
  [2e619515] Expat_jll v2.6.5+0
  [f8c6e375] Git_jll v2.49.0+0
  [528830af] Gumbo_jll v0.10.2+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [9bd350c2] OpenSSH_jll v9.9.2+0
  [458c3c95] OpenSSL_jll v3.0.16+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [47bcb7c8] libsass_jll v3.6.6+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [05823500] OpenLibm_jll v0.8.5+0
  [efcefdf7] PCRE2_jll v10.42.0+1
  [bea87d4a] SuiteSparse_jll v7.7.0+0
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Test Summary:          | Pass  Total   Time
Column Sum Consistency |    3      3  13.1s
Test Summary:                  | Pass  Total  Time
Hand Constructed: Default Case |    4      4  2.9s
Test Summary:                            | Pass  Total   Time
Symmetric Hand Constructed: Default Case |    6      6  33.7s
Test Summary:               | Pass  Total  Time
Hand Constructed: Edge Case |    3      3  0.1s
Test Summary:                 | Pass  Total  Time
Hand Constructed: Edge Case 2 |    3      3  0.0s
Test Summary:                                 | Pass  Total  Time
Hand Constructed: Edge Case 3 and Consistency |    3      3  1.9s
Test Summary:                                 | Pass  Total  Time
Transition Rate Matrix Consistency: Edge Case |    3      3  3.8s
[ Info: computing sparse count matrix

0.0%┣                                                ┫ 0/9 [00:00<00:00, -0s/it]

11.1%┣████▊                                      ┫ 1/9 [00:01<Inf:Inf, InfGs/it]

100.0%┣███████████████████████████████████████████████┫ 9/9 [00:01<00:00, 8it/s]

100.0%┣███████████████████████████████████████████████┫ 9/9 [00:01<00:00, 8it/s]
[ Info: computing sparse count matrix

0.0%┣                                                ┫ 0/9 [00:00<00:00, -0s/it]

100.0%┣███████████████████████████████████████████┫ 9/9 [00:00<00:00, 11.6kit/s]

100.0%┣████████████████████████████████████████████┫ 9/9 [00:00<00:00, 5.9kit/s]

0.0%┣                                                ┫ 0/3 [00:00<00:00, -0s/it]

33.3%┣██████████████▍                            ┫ 1/3 [00:01<Inf:Inf, InfGs/it]

100.0%┣███████████████████████████████████████████████┫ 3/3 [00:01<00:00, 2it/s]

100.0%┣███████████████████████████████████████████████┫ 3/3 [00:01<00:00, 2it/s]

0.0%┣                                                ┫ 0/1 [00:00<00:00, -0s/it]

100.0%┣██████████████████████████████████████████┫ 1/1 [00:00<Inf:Inf, InfGs/it]

100.0%┣██████████████████████████████████████████┫ 1/1 [00:00<Inf:Inf, InfGs/it]

0.0%┣                                                ┫ 0/3 [00:00<00:00, -0s/it]

100.0%┣███████████████████████████████████████████┫ 3/3 [00:00<00:00, 17.7kit/s]

100.0%┣███████████████████████████████████████████┫ 3/3 [00:00<00:00, 11.3kit/s]

0.0%┣                                                ┫ 0/2 [00:00<00:00, -0s/it]

100.0%┣████████████████████████████████████████████┫ 2/2 [00:00<00:00, 4.1kit/s]

100.0%┣████████████████████████████████████████████┫ 2/2 [00:00<00:00, 3.0kit/s]

0.0%┣                                                ┫ 0/3 [00:00<00:00, -0s/it]

100.0%┣███████████████████████████████████████████┫ 3/3 [00:00<00:00, 22.9kit/s]

100.0%┣███████████████████████████████████████████┫ 3/3 [00:00<00:00, 12.2kit/s]
Test Summary:                               | Pass  Total   Time
Hand Constructed: Default Case Sparse Check |    4      4  24.8s
Test Summary:               | Pass  Total   Time
Convergence Test: Generator |   36     36  50.4s
Test Summary:                      | Pass  Total  Time
Convergence Test: Perron Frobenius |   36     36  1.3s
Test Summary:       | Pass  Total  Time
Step Heuristic Test |    4      4  7.8s
Test Summary: | Pass  Total  Time
Holding Times |    4      4  1.4s
Test Summary:                  | Pass  Total  Time
ContinuousTimeEmpiricalProcess |    2      2  6.9s
Test Summary:                        | Pass  Total   Time
Bayesian Matrix: Basic Functionality |   18     18  21.2s
Test Summary:                             | Pass  Total  Time
Bayesian Matrix: Random Matrix Properties |    6      6  4.2s
Test Summary:                       | Pass  Total  Time
Bayesian Matrix: Prior to Posterior |    4      4  4.5s
┌ Warning: no data for state 2, falling back on prior
└ @ MarkovChainHammer.BayesianMatrix ~/.julia/packages/MarkovChainHammer/JX04A/src/BayesianMatrix/constructors.jl:134
┌ Warning: no data for state 2, falling back on prior
└ @ MarkovChainHammer.BayesianMatrix ~/.julia/packages/MarkovChainHammer/JX04A/src/BayesianMatrix/constructors.jl:134
Test Summary:                           | Pass  Total  Time
Bayesian Matrix: Ensemble Functionality |    1      1  2.1s
Test Summary:                | Pass  Total  Time
Unpacking and Reconstructing |    5      5  1.5s
Test Summary: | Pass  Total   Time
Leicht Newman |   12     12  18.4s
Test Summary:             | Pass  Total  Time
utilities: scaled_entropy |    5      5  0.0s
Test Summary:           | Pass  Total  Time
utilities: steady state |    2      2  1.7s
Test Summary:            | Pass  Total  Time
utilities: koopman_modes |    1      1  1.4s
Test Summary:                  | Pass  Total  Time
utilities: decorrelation times |    2      2  0.3s
Test Summary:                  | Pass  Total  Time
Histogram Test: uniform weight |    4      4  2.9s
Test Summary:                     | Pass  Total  Time
Histogram Test: nonuniform weight |    4      4  1.5s

0.0%┣                                               ┫ 0/10 [00:00<00:00, -0s/it]

100.0%┣█████████████████████████████████████████┫ 10/10 [00:00<00:00, 30.5kit/s]

100.0%┣█████████████████████████████████████████┫ 10/10 [00:00<00:00, 23.8kit/s]
Test Summary:       | Pass  Total   Time
Autocovariance Test |    6      6  16.6s
Test Summary:    | Pass  Total  Time
Special Matrices |    3      3  2.4s
Test Summary:      | Pass  Total  Time
Decomposition Test |   32     32  4.9s
     Testing MarkovChainHammer tests passed 

Testing completed after 287.48s

PkgEval succeeded after 361.8s