Package evaluation of LikelihoodProfiler on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T18:57:29.782 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.35s ################################################################################ # Installation # Installing LikelihoodProfiler... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [93acb638] + LikelihoodProfiler v1.0.1 Updating `~/.julia/environments/v1.11/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.18.0 [d1d4a3ce] + BitFlags v0.1.9 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.5.8 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 ⌅ [82cc6244] + DataInterpolations v7.2.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.50 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.4 [4e289a0a] + EnumX v1.0.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [9aa1b823] + FastClosures v0.3.2 [1a297f60] + FillArrays v1.13.0 [64ca27bc] + FindFirstFunctions v1.4.1 ⌅ [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [cd3eb016] + HTTP v1.10.15 [34004b35] + HypergeometricFunctions v0.3.28 [842dd82b] + InlineStrings v1.4.3 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [ae98c720] + Jieko v0.2.1 [b964fa9f] + LaTeXStrings v1.4.0 [93acb638] + LikelihoodProfiler v1.0.1 [16fef848] + LiveServer v1.5.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 ⌅ [6c6e2e6c] + MIMEs v0.1.4 [1914dd2f] + MacroTools v0.5.15 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.5 [77ba4419] + NaNMath v1.1.3 [4d8831e6] + OpenSSL v1.4.3 [bca83a33] + OptimizationBase v2.5.0 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.33 [2dfb63ee] + PooledArrays v1.4.3 [d236fae5] + PreallocationTools v0.4.26 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.31.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.13 [0bca4576] + SciMLBase v2.82.1 [c0aeaf25] + SciMLOperators v0.3.13 [53ae85a6] + SciMLStructures v1.7.0 [91c51154] + SentinelArrays v1.4.8 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.1 [9f842d2f] + SparseConnectivityTracer v0.6.15 [0a514795] + SparseMatrixColorings v0.4.16 [276daf66] + SpecialFunctions v2.5.0 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.4.0 [892a3eda] + StringManipulation v0.4.1 [2efcf032] + SymbolicIndexingInterface v0.3.38 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.5.2 [458c3c95] + OpenSSL_jll v3.0.16+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.2.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.59s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 191.75s ################################################################################ # Testing # Testing LikelihoodProfiler Status `/tmp/jl_C9VJFC/Project.toml` [33444335] CICOBase v0.5.3 [a93c6f00] DataFrames v1.7.0 ⌅ [82cc6244] DataInterpolations v7.2.0 [31c24e10] Distributions v0.25.118 ⌅ [f6369f11] ForwardDiff v0.10.38 [93acb638] LikelihoodProfiler v1.0.1 [16fef848] LiveServer v1.5.0 [7f7a1694] Optimization v4.1.2 [bca83a33] OptimizationBase v2.5.0 [4e6fcdb7] OptimizationNLopt v0.3.2 [1dea7af3] OrdinaryDiffEq v6.93.0 [91a5bcdd] Plots v1.40.11 [d236fae5] PreallocationTools v0.4.26 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [0bca4576] SciMLBase v2.82.1 [37e2e46d] LinearAlgebra v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_C9VJFC/Manifest.toml` [47edcb42] ADTypes v1.14.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.18.0 [4c555306] ArrayLayouts v1.11.1 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.1.3 [fa961155] CEnum v0.5.0 [33444335] CICOBase v0.5.3 [2a0fbf3d] CPUSummary v0.2.6 [49dc2e85] Calculus v0.5.2 [d360d2e6] ChainRulesCore v1.25.1 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.29.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.0 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [f0e56b4a] ConcurrentUtilities v2.5.0 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.5.8 [d38c429a] Contour v0.6.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 ⌅ [82cc6244] DataInterpolations v7.2.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [2b5f629d] DiffEqBase v6.167.2 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.6.50 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.8 [460bff9d] ExceptionUnwrapping v0.1.11 [d4d017d3] ExponentialUtilities v1.27.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [c87230d0] FFMPEG v0.4.2 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.0.2 [a4df4552] FastPower v1.1.2 [1a297f60] FillArrays v1.13.0 [64ca27bc] FindFirstFunctions v1.4.1 [6a86dc24] FiniteDiff v2.27.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 ⌅ [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [28b8d3ca] GR v0.73.13 [c145ed77] GenericSchur v0.5.4 [86223c79] Graphs v1.12.1 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.15 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.3 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [1019f520] JLFzf v0.1.10 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [ae98c720] Jieko v0.2.1 [ba0b0d4f] Krylov v0.9.10 [5be7bae1] LBFGSB v0.4.1 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.7 [10f19ff3] LayoutPointers v0.1.17 [5078a376] LazyArrays v2.6.1 [1d6d02ad] LeftChildRightSiblingTrees v0.2.0 [93acb638] LikelihoodProfiler v1.0.1 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.3.0 [7ed4a6bd] LinearSolve v3.7.2 [16fef848] LiveServer v1.5.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 ⌅ [6c6e2e6c] MIMEs v0.1.4 [1914dd2f] MacroTools v0.5.15 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [739be429] MbedTLS v1.1.9 [442fdcdd] Measures v0.3.2 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.5 [46d2c3a1] MuladdMacro v0.2.4 [d41bc354] NLSolversBase v7.9.1 [76087f3c] NLopt v1.1.3 [77ba4419] NaNMath v1.1.3 [8913a72c] NonlinearSolve v4.5.1 [be0214bd] NonlinearSolveBase v1.5.2 [5959db7a] NonlinearSolveFirstOrder v1.3.1 [9a2c21bd] NonlinearSolveQuasiNewton v1.2.1 [26075421] NonlinearSolveSpectralMethods v1.1.1 [4d8831e6] OpenSSL v1.4.3 [7f7a1694] Optimization v4.1.2 [bca83a33] OptimizationBase v2.5.0 [4e6fcdb7] OptimizationNLopt v0.3.2 [bac558e1] OrderedCollections v1.8.0 [1dea7af3] OrdinaryDiffEq v6.93.0 [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.2.0 [6ad6398a] OrdinaryDiffEqBDF v1.4.0 [bbf590c4] OrdinaryDiffEqCore v1.22.0 [50262376] OrdinaryDiffEqDefault v1.3.0 [4302a76b] OrdinaryDiffEqDifferentiation v1.6.0 [9286f039] OrdinaryDiffEqExplicitRK v1.1.0 [e0540318] OrdinaryDiffEqExponentialRK v1.4.0 [becaefa8] OrdinaryDiffEqExtrapolation v1.5.0 [5960d6e9] OrdinaryDiffEqFIRK v1.10.0 [101fe9f7] OrdinaryDiffEqFeagin v1.1.0 [d3585ca7] OrdinaryDiffEqFunctionMap v1.1.1 [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.1.0 [9f002381] OrdinaryDiffEqIMEXMultistep v1.3.0 [521117fe] OrdinaryDiffEqLinear v1.1.0 [1344f307] OrdinaryDiffEqLowOrderRK v1.2.0 [b0944070] OrdinaryDiffEqLowStorageRK v1.3.0 [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.6.0 [c9986a66] OrdinaryDiffEqNordsieck v1.1.0 [5dd0a6cf] OrdinaryDiffEqPDIRK v1.3.0 [5b33eab2] OrdinaryDiffEqPRK v1.1.0 [04162be5] OrdinaryDiffEqQPRK v1.1.0 [af6ede74] OrdinaryDiffEqRKN v1.1.0 [43230ef6] OrdinaryDiffEqRosenbrock v1.9.0 [2d112036] OrdinaryDiffEqSDIRK v1.3.0 [669c94d9] OrdinaryDiffEqSSPRK v1.2.1 [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.3.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.1.0 [fa646aed] OrdinaryDiffEqSymplecticRK v1.3.0 [b1df2697] OrdinaryDiffEqTsit5 v1.1.0 [79d7bb75] OrdinaryDiffEqVerner v1.1.1 [90014a1f] PDMats v0.11.33 [65ce6f38] PackageExtensionCompat v1.0.2 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.1 [ccf2f8ad] PlotThemes v3.3.0 [995b91a9] PlotUtils v1.4.3 [91a5bcdd] Plots v1.40.11 [f517fe37] Polyester v0.7.16 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [d236fae5] PreallocationTools v0.4.26 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [33c8b6b6] ProgressLogging v0.1.4 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [01d81517] RecipesPipeline v0.6.12 [731186ca] RecursiveArrayTools v3.31.2 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.13 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.82.1 [19f34311] SciMLJacobianOperators v0.1.2 [c0aeaf25] SciMLOperators v0.3.13 [53ae85a6] SciMLStructures v1.7.0 [6c6a2e73] Scratch v1.2.1 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [992d4aef] Showoff v1.0.3 [777ac1f9] SimpleBufferStream v1.2.0 [727e6d20] SimpleNonlinearSolve v2.2.1 [699a6c99] SimpleTraits v0.9.4 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.1 [9f842d2f] SparseConnectivityTracer v0.6.15 [47a9eef4] SparseDiffTools v2.24.0 [0a514795] SparseMatrixColorings v0.4.16 [276daf66] SpecialFunctions v2.5.0 [860ef19b] StableRNGs v1.0.2 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.4.0 [7792a7ef] StrideArraysCore v0.5.7 [892a3eda] StringManipulation v0.4.1 [2efcf032] SymbolicIndexingInterface v0.3.38 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [62fd8b95] TensorCore v0.1.1 [5d786b92] TerminalLoggers v0.1.7 [8290d209] ThreadingUtilities v0.5.2 [a759f4b9] TimerOutputs v0.5.28 [3bb67fe8] TranscodingStreams 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling DistributionsTestExt... 4731.9 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 7 seconds. 48 already precompiled. Test Summary: | Pass Total Time Problem interface | 7 7 4.2s Precompiling Optimization... 4745.2 ms ✓ Optimization 1 dependency successfully precompiled in 5 seconds. 102 already precompiled. Precompiling OptimizationNLopt... 3837.9 ms ✓ OptimizationNLopt 1 dependency successfully precompiled in 5 seconds. 106 already precompiled. Precompiling OrdinaryDiffEq... 4201.9 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 9288.6 ms ✓ Graphs 2385.6 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 16771.7 ms ✓ NonlinearSolveBase 2085.0 ms ✓ StrideArraysCore 3001.5 ms ✓ VertexSafeGraphs 26301.5 ms ✓ LinearSolve 3020.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 3795.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 2858.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 2507.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 8742.4 ms ✓ BracketingNonlinearSolve 1917.4 ms ✓ Polyester 6974.4 ms ✓ SparseDiffTools 4008.2 ms ✓ LinearSolve → LinearSolveEnzymeExt 8670.1 ms ✓ LinearSolve → LinearSolveSparseArraysExt 4166.7 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 3188.2 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 1752.1 ms ✓ FastBroadcast 4652.7 ms ✓ SparseDiffTools → SparseDiffToolsPolyesterExt 22261.9 ms ✓ SimpleNonlinearSolve 1899.2 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 3714.0 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 7781.3 ms ✓ DiffEqBase 3550.3 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 3965.0 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 3317.8 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 10196.3 ms ✓ OrdinaryDiffEqCore 3164.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseDiffEqBaseExt 4446.4 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveDiffEqBaseExt 3374.7 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 17202.1 ms ✓ NonlinearSolveSpectralMethods 29170.0 ms ✓ NonlinearSolveQuasiNewton 51520.9 ms ✓ NonlinearSolveFirstOrder 6013.6 ms ✓ OrdinaryDiffEqExplicitRK 7265.4 ms ✓ OrdinaryDiffEqHighOrderRK 7290.5 ms ✓ OrdinaryDiffEqStabilizedRK 6616.0 ms ✓ OrdinaryDiffEqSymplecticRK 9469.4 ms ✓ OrdinaryDiffEqSSPRK 9642.2 ms ✓ OrdinaryDiffEqLowOrderRK 5013.3 ms ✓ OrdinaryDiffEqFunctionMap 15066.6 ms ✓ OrdinaryDiffEqTsit5 73697.2 ms ✓ OrdinaryDiffEqVerner 5967.6 ms ✓ OrdinaryDiffEqPRK 6445.4 ms ✓ OrdinaryDiffEqRKN 6183.2 ms ✓ OrdinaryDiffEqFeagin 5865.0 ms ✓ OrdinaryDiffEqQPRK 9550.7 ms ✓ OrdinaryDiffEqLowStorageRK 12029.1 ms ✓ OrdinaryDiffEqDifferentiation 3909.2 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 5792.0 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 6745.4 ms ✓ OrdinaryDiffEqAdamsBashforthMoulton 4945.5 ms ✓ OrdinaryDiffEqNordsieck 5602.9 ms ✓ OrdinaryDiffEqLinear 12743.6 ms ✓ OrdinaryDiffEqExtrapolation 47737.8 ms ✓ OrdinaryDiffEqRosenbrock 32671.6 ms ✓ NonlinearSolve 11862.0 ms ✓ OrdinaryDiffEqNonlinearSolve 11380.7 ms ✓ OrdinaryDiffEqStabilizedIRK 14885.7 ms ✓ OrdinaryDiffEqSDIRK 50052.0 ms ✓ OrdinaryDiffEqFIRK 11029.8 ms ✓ OrdinaryDiffEqIMEXMultistep 12300.9 ms ✓ OrdinaryDiffEqPDIRK 10981.7 ms ✓ OrdinaryDiffEqExponentialRK 35926.6 ms ✓ OrdinaryDiffEqBDF 69668.3 ms ✓ OrdinaryDiffEqDefault 15940.1 ms ✓ OrdinaryDiffEq 67 dependencies successfully precompiled in 841 seconds. 177 already precompiled. Precompiling DiffEqBaseDistributionsExt... 6273.2 ms ✓ DiffEqBase → DiffEqBaseDistributionsExt 1 dependency successfully precompiled in 9 seconds. 124 already precompiled. Precompiling DataInterpolationsChainRulesCoreExt... 2514.5 ms ✓ DataInterpolations → DataInterpolationsChainRulesCoreExt 1 dependency successfully precompiled in 3 seconds. 44 already precompiled. Precompiling StatsFunsChainRulesCoreExt... 3960.6 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1 dependency successfully precompiled in 4 seconds. 24 already precompiled. Precompiling DistributionsChainRulesCoreExt... 4823.1 ms ✓ Distributions → DistributionsChainRulesCoreExt 1 dependency successfully precompiled in 7 seconds. 51 already precompiled. Precompiling SparseMatrixColoringsColorsExt... 1920.9 ms ✓ SparseMatrixColorings → SparseMatrixColoringsColorsExt 1 dependency successfully precompiled in 2 seconds. 12 already precompiled. Test Summary: | Pass Total Time Analytic functions | 395 395 19m15.6s Test Summary: | Pass Total Time SIR model | 36 36 1m55.3s Test Summary: | Pass Total Time Taxol model | 34 34 5m19.3s ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 67 running 1 of 1 signal (10): User defined signal 1 checkbounds at ./abstractarray.jl:699 [inlined] getindex at ./array.jl:929 [inlined] #generic_lufact!#187 at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/lu.jl:204 generic_lufact! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/lu.jl:152 [inlined] do_factorization at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/factorization.jl:149 [inlined] macro expansion at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/LinearSolve.jl:163 [inlined] #solve!#111 at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/LinearSolve.jl:159 solve! at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/LinearSolve.jl:159 [inlined] macro expansion at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/default.jl:339 [inlined] #solve!#100 at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/default.jl:332 solve! at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/default.jl:332 [inlined] #solve!#8 at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/common.jl:307 [inlined] solve! at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/common.jl:306 [inlined] #dolinsolve#2 at /home/pkgeval/.julia/packages/OrdinaryDiffEqDifferentiation/M5647/src/linsolve_utils.jl:29 [inlined] dolinsolve at /home/pkgeval/.julia/packages/OrdinaryDiffEqDifferentiation/M5647/src/linsolve_utils.jl:5 [inlined] perform_step! at /home/pkgeval/.julia/packages/OrdinaryDiffEqRosenbrock/uZMnm/src/rosenbrock_perform_step.jl:58 perform_step! at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/perform_step/composite_perform_step.jl:159 [inlined] perform_step! at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/perform_step/composite_perform_step.jl:156 [inlined] solve! at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/solve.jl:620 #__solve#62 at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/solve.jl:7 [inlined] __solve at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/solve.jl:1 [inlined] #solve_call#35 at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:635 solve_call at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:592 [inlined] #solve_up#44 at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:1142 [inlined] solve_up at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:1120 [inlined] #solve#42 at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:1057 [inlined] solve at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:1047 unknown function (ip: 0x7e369dbcd34d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 solve_prob at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/test/problems/jak-stat_model.jl:66 jakstat_obj at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/test/problems/jak-stat_model.jl:96 #20 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/optprob_utils.jl:81 [inlined] OptimizationFunction at /home/pkgeval/.julia/packages/SciMLBase/LGLmH/src/scimlfunctions.jl:4097 [inlined] #7 at /home/pkgeval/.julia/packages/OptimizationNLopt/YE3fr/src/OptimizationNLopt.jl:202 #8 at /home/pkgeval/.julia/packages/OptimizationNLopt/YE3fr/src/OptimizationNLopt.jl:214 unknown function (ip: 0x7e369dbe1549) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 nlopt_callback_wrapper at /home/pkgeval/.julia/packages/NLopt/6hGun/src/NLopt.jl:466 unknown function (ip: 0x7e369dbddb0b) nldrmd_minimize_ at /home/pkgeval/.julia/artifacts/fb8d21cdf72875523ec9ec77a77f087e9414858f/lib/libnlopt.so (unknown line) nldrmd_minimize at /home/pkgeval/.julia/artifacts/fb8d21cdf72875523ec9ec77a77f087e9414858f/lib/libnlopt.so (unknown line) nlopt_optimize at /home/pkgeval/.julia/artifacts/fb8d21cdf72875523ec9ec77a77f087e9414858f/lib/libnlopt.so (unknown line) nlopt_optimize at /home/pkgeval/.julia/packages/NLopt/6hGun/src/libnlopt.jl:182 [inlined] optimize! at /home/pkgeval/.julia/packages/NLopt/6hGun/src/NLopt.jl:790 optimize at /home/pkgeval/.julia/packages/NLopt/6hGun/src/NLopt.jl:804 [inlined] __solve at /home/pkgeval/.julia/packages/OptimizationNLopt/YE3fr/src/OptimizationNLopt.jl:294 solve! at /home/pkgeval/.julia/packages/SciMLBase/LGLmH/src/solve.jl:187 [inlined] solve_optcache at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profiler_state.jl:186 [inlined] profiler_step! at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profiler_state.jl:166 __profile_dir! at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:79 unknown function (ip: 0x7e369dbe0a35) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #__profile_dir#15 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:63 __profile_dir at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:60 [inlined] #13 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:50 iterate at ./generator.jl:48 [inlined] collect_to! at ./array.jl:849 unknown function (ip: 0x7e369dbe4a98) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 collect_to! at ./array.jl:857 collect_to_with_first! at ./array.jl:827 unknown function (ip: 0x7e369dbe29d5) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _collect at ./array.jl:821 collect_similar at ./array.jl:720 [inlined] map at ./abstractarray.jl:3371 [inlined] macro expansion at ./timing.jl:421 [inlined] #__profile#12 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:49 __profile at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:47 [inlined] #profile#11 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:43 profile at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:36 unknown function (ip: 0x7e369dbcb8f6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_body at /source/src/interpreter.c:562 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x7e36bf709962) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x7e36bf700082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e36c0a3f249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x799a59365d92) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2142 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2082 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x799a5935bfed) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1837 unknown function (ip: 0x799a593505aa) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x799a593502ad) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x799a5934fc9d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x799a5934c146) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x799a5a66c249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x0000799a4d000010 Total snapshots: 28. Utilization: 0% ╎28 @Base/client.jl:531; _start() ╎ 28 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 28 @Base/Base.jl:557; include(mod::Module, _path::String) ╎ 28 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path:… ╎ 28 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod:… ╎ 28 @Base/boot.jl:430; eval ╎ ╎ 28 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeo… ╎ ╎ 28 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 28 @Pkg/src/API.jl:147; test ╎ ╎ 28 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 28 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::t… ╎ ╎ ╎ 28 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec};… ╎ ╎ ╎ 28 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io… ╎ ╎ ╎ 28 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vect… ╎ ╎ ╎ 28 …src/Operations.jl:2007; test ╎ ╎ ╎ 28 …src/Operations.jl:2063; test(ctx::Pkg.Types.Context, pkgs… ╎ ╎ ╎ ╎ 28 …rc/Operations.jl:1837; kwcall(::@NamedTuple{preferences:… ╎ ╎ ╎ ╎ 28 …rc/Operations.jl:1845; #sandbox#115 ╎ ╎ ╎ ╎ 28 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 28 @Base/file.jl:815; mktempdir(fn::Function, parent::Str… ╎ ╎ ╎ ╎ 28 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#… ╎ ╎ ╎ ╎ ╎ 28 …/Operations.jl:1898; (::Pkg.Operations.var"#116#121… ╎ ╎ ╎ ╎ ╎ 28 …/Operations.jl:1789; with_temp_env(fn::Pkg.Operati… ╎ ╎ ╎ ╎ ╎ 28 …Operations.jl:1931; (::Pkg.Operations.var"#118#12… ╎ ╎ ╎ ╎ ╎ 28 @Base/env.jl:265; withenv(::Pkg.Operations.var"#1… ╎ ╎ ╎ ╎ ╎ 28 …Operations.jl:2082; (::Pkg.Operations.var"#131#… ╎ ╎ ╎ ╎ ╎ ╎ 28 …perations.jl:2142; subprocess_handler(cmd::Cmd… ╎ ╎ ╎ ╎ ╎ ╎ 28 …e/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 28 …e/process.jl:694; wait(x::Base.Process, sync… ╎ ╎ ╎ ╎ ╎ ╎ 28 …ondition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 28 …ondition.jl:130; wait(c::Base.GenericCondi… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 28 …ase/task.jl:1021; wait() 27╎ ╎ ╎ ╎ ╎ ╎ ╎ 28 …ase/task.jl:1012; poptask(W::Base.Intrus… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 [67] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/test/test_jak-stat_model.jl:56 _new_genericmemory_ at /source/src/genericmemory.c:47 GenericMemory at ./boot.jl:516 [inlined] Array at ./boot.jl:578 [inlined] #generic_lufact!#187 at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/lu.jl:161 generic_lufact! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/lu.jl:152 [inlined] do_factorization at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/factorization.jl:149 [inlined] macro expansion at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/LinearSolve.jl:163 [inlined] #solve!#111 at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/LinearSolve.jl:159 solve! at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/LinearSolve.jl:159 [inlined] macro expansion at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/default.jl:339 [inlined] #solve!#100 at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/default.jl:332 solve! at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/default.jl:332 [inlined] #solve!#8 at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/common.jl:307 [inlined] solve! at /home/pkgeval/.julia/packages/LinearSolve/KN05h/src/common.jl:306 [inlined] #dolinsolve#2 at /home/pkgeval/.julia/packages/OrdinaryDiffEqDifferentiation/M5647/src/linsolve_utils.jl:29 [inlined] dolinsolve at /home/pkgeval/.julia/packages/OrdinaryDiffEqDifferentiation/M5647/src/linsolve_utils.jl:5 [inlined] perform_step! at /home/pkgeval/.julia/packages/OrdinaryDiffEqRosenbrock/uZMnm/src/rosenbrock_perform_step.jl:58 perform_step! at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/perform_step/composite_perform_step.jl:159 [inlined] perform_step! at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/perform_step/composite_perform_step.jl:156 [inlined] solve! at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/solve.jl:620 #__solve#62 at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/solve.jl:7 [inlined] __solve at /home/pkgeval/.julia/packages/OrdinaryDiffEqCore/bMOsj/src/solve.jl:1 [inlined] #solve_call#35 at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:635 solve_call at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:592 [inlined] #solve_up#44 at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:1142 [inlined] solve_up at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:1120 [inlined] #solve#42 at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:1057 [inlined] solve at /home/pkgeval/.julia/packages/DiffEqBase/zYZst/src/solve.jl:1047 unknown function (ip: 0x7e369dbcd34d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 solve_prob at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/test/problems/jak-stat_model.jl:66 jakstat_obj at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/test/problems/jak-stat_model.jl:96 #20 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/optprob_utils.jl:81 [inlined] OptimizationFunction at /home/pkgeval/.julia/packages/SciMLBase/LGLmH/src/scimlfunctions.jl:4097 [inlined] #7 at /home/pkgeval/.julia/packages/OptimizationNLopt/YE3fr/src/OptimizationNLopt.jl:202 #8 at /home/pkgeval/.julia/packages/OptimizationNLopt/YE3fr/src/OptimizationNLopt.jl:214 unknown function (ip: 0x7e369dbe1549) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 nlopt_callback_wrapper at /home/pkgeval/.julia/packages/NLopt/6hGun/src/NLopt.jl:466 unknown function (ip: 0x7e369dbddb0b) nldrmd_minimize_ at /home/pkgeval/.julia/artifacts/fb8d21cdf72875523ec9ec77a77f087e9414858f/lib/libnlopt.so (unknown line) nldrmd_minimize at /home/pkgeval/.julia/artifacts/fb8d21cdf72875523ec9ec77a77f087e9414858f/lib/libnlopt.so (unknown line) nlopt_optimize at /home/pkgeval/.julia/artifacts/fb8d21cdf72875523ec9ec77a77f087e9414858f/lib/libnlopt.so (unknown line) nlopt_optimize at /home/pkgeval/.julia/packages/NLopt/6hGun/src/libnlopt.jl:182 [inlined] optimize! at /home/pkgeval/.julia/packages/NLopt/6hGun/src/NLopt.jl:790 optimize at /home/pkgeval/.julia/packages/NLopt/6hGun/src/NLopt.jl:804 [inlined] __solve at /home/pkgeval/.julia/packages/OptimizationNLopt/YE3fr/src/OptimizationNLopt.jl:294 solve! at /home/pkgeval/.julia/packages/SciMLBase/LGLmH/src/solve.jl:187 [inlined] solve_optcache at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profiler_state.jl:186 [inlined] profiler_step! at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profiler_state.jl:166 __profile_dir! at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:79 unknown function (ip: 0x7e369dbe0a35) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #__profile_dir#15 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:63 __profile_dir at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:60 [inlined] #13 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:50 iterate at ./generator.jl:48 [inlined] collect_to! at ./array.jl:849 unknown function (ip: 0x7e369dbe4a98) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 collect_to! at ./array.jl:857 collect_to_with_first! at ./array.jl:827 unknown function (ip: 0x7e369dbe29d5) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _collect at ./array.jl:821 collect_similar at ./array.jl:720 [inlined] map at ./abstractarray.jl:3371 [inlined] macro expansion at ./timing.jl:421 [inlined] #__profile#12 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:49 __profile at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:47 [inlined] #profile#11 at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:43 profile at /home/pkgeval/.julia/packages/LikelihoodProfiler/FBHFA/src/profile.jl:36 unknown function (ip: 0x7e369dbcb8f6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 poptask at ./task.jl:1012 eval_body at /source/src/interpreter.c:562 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 wait at ./task.jl:1021 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x7e36bf709962) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] #wait#731 at ./condition.jl:130 do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 profile_printing_listener at ./Base.jl:577 #1190 at ./Base.jl:617 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x7e36bf700082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 jfptr_YY.1190_76096.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) Allocations: 21930100 (Pool: 21929092; Big: 1008); GC: 22 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 error at ./error.jl:35 _start at ./client.jl:531 #schedule#761 at ./task.jl:884 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e36c0a3f249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) Allocations: 797840516 (Pool: 797832541; Big: 7975); GC: 350 schedule at ./task.jl:876 [inlined] uv_writecb_task at ./stream.jl:1200 jfptr_uv_writecb_task_67080.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jlcapi_uv_writecb_task_67543.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 uv_write at ./stream.jl:1081 unsafe_write at ./stream.jl:1154 write at ./strings/io.jl:248 [inlined] print at ./strings/io.jl:250 jfptr_print_48429.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 showerror at ./errorshow.jl:152 unknown function (ip: 0x799a593723a6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _atexit at ./initdefs.jl:462 jfptr__atexit_69596.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] ijl_atexit_hook at /source/src/init.c:271 jl_exit_thread0_cb at /source/src/signals-unix.c:517 PkgEval terminated after 2722.83s: test duration exceeded the time limit