Package evaluation of JuliaChem on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T14:01:59.454 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.32s ################################################################################ # Installation # Installing JuliaChem... Resolving package versions... Installed MPI ─────── v0.16.1 Installed HDF5 ────── v0.15.7 Installed JuliaChem ─ v0.1.0 Updating `~/.julia/environments/v1.11/Project.toml` [0a8e60a0] + JuliaChem v0.1.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [9e28174c] + BinDeps v1.0.2 [a74b3585] + Blosc v0.7.3 ⌅ [34da2185] + Compat v3.47.0 [a8cc5b0e] + Crayons v4.1.1 ⌅ [1f15a43c] + CxxWrap v0.11.2 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 ⌅ [ffbed154] + DocStringExtensions v0.8.6 [59287772] + Formatting v0.4.3 ⌅ [f67ccb44] + HDF5 v0.15.7 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [0a8e60a0] + JuliaChem v0.1.0 ⌅ [da04e1cc] + MPI v0.16.1 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 [bac558e1] + OrderedCollections v1.8.0 [69de0a69] + Parsers v2.8.1 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 ⌅ [08abe8d2] + PrettyTables v0.11.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [30578b45] + URIParser v0.4.1 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 [bc6bbf8a] + Eigen_jll v3.4.0+0 ⌅ [0234f1f7] + HDF5_jll v1.12.2+2 [e33a78d0] + Hwloc_jll v2.12.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.0+1 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+2 ⌅ [458c3c95] + OpenSSL_jll v1.1.23+1 [3161d3a3] + Zstd_jll v1.5.7+1 [28df3c45] + boost_jll v1.87.0+0 ⌅ [3eaa8342] + libcxxwrap_julia_jll v0.8.8+1 [5fdff7f3] + libint_jll v2.7.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building HDF5 ─────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/698c099c6613d7b7f151832868728f426abe698b/build.log` Building MPI ──────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/d3aae0fd4d9e1a09c3e2fc728fbe2522ec6d54bc/build.log` Building JuliaChem → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/fd7a4144672b96d22c270aa0046c075ba1e9532b/build.log` Installation failed after 38.21s ERROR: LoadError: Error building `JuliaChem`: Precompiling Eigen_jll... 1061.3 ms ✓ Eigen_jll 1 dependency successfully precompiled in 1 seconds. 25 already precompiled. Precompiling boost_jll... 2558.1 ms ✓ boost_jll 1 dependency successfully precompiled in 3 seconds. 8 already precompiled. Precompiling libcxxwrap_julia_jll... 1034.5 ms ✓ libcxxwrap_julia_jll 1 dependency successfully precompiled in 1 seconds. 25 already precompiled. Precompiling libint_jll... 5085.7 ms ✓ libint_jll 1 dependency successfully precompiled in 5 seconds. 23 already precompiled. ERROR: LoadError: UndefVarError: `artifact_dir` not defined in `libcxxwrap_julia_jll` Stacktrace: [1] build_jeri() @ Main ~/.julia/packages/JuliaChem/6Wzrb/deps/build.jl:9 [2] top-level scope @ ~/.julia/packages/JuliaChem/6Wzrb/deps/build.jl:22 [3] include(fname::String) @ Main ./sysimg.jl:38 [4] top-level scope @ none:5 in expression starting at /home/pkgeval/.julia/packages/JuliaChem/6Wzrb/deps/build.jl:22 Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] (::Pkg.Operations.var"#67#74"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec, String})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1191 [3] withenv(::Pkg.Operations.var"#67#74"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec, String}, ::Pair{String, String}, ::Vararg{Pair{String}}) @ Base ./env.jl:265 [4] (::Pkg.Operations.var"#118#123"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#67#74"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec, String}, Pkg.Types.PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 [5] with_temp_env(fn::Pkg.Operations.var"#118#123"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#67#74"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec, String}, Pkg.Types.PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 [6] (::Pkg.Operations.var"#116#121"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#67#74"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec, String}, Pkg.Types.Context, Pkg.Types.PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 [7] mktempdir(fn::Pkg.Operations.var"#116#121"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#67#74"{Bool, Pkg.Types.Context, String, Pkg.Types.PackageSpec, String}, Pkg.Types.Context, Pkg.Types.PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:819 [8] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:815 [9] mktempdir @ ./file.jl:815 [inlined] [10] #sandbox#115 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] [11] build_versions(ctx::Pkg.Types.Context, uuids::Set{UUID}; verbose::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1172 [12] build_versions @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1090 [inlined] [13] add(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}, new_git::Set{UUID}; allow_autoprecomp::Bool, preserve::Pkg.Types.PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1468 [14] add @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1414 [inlined] [15] add(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; preserve::Pkg.Types.PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol, allow_autoprecomp::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:312 [16] add(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [17] add(pkgs::Vector{Pkg.Types.PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 [18] add(pkg::Pkg.Types.PackageSpec) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [19] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:112 in expression starting at /PkgEval.jl/scripts/evaluate.jl:109 PkgEval skipped after 57.57s: package could not be installed