Package evaluation of JuliaBUGS on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T19:42:41.599 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 11.64s ################################################################################ # Installation # Installing JuliaBUGS... Resolving package versions... Installed IrrationalConstants ───────── v0.2.4 Installed RegistryInstances ─────────── v0.1.0 Installed JLD2 ──────────────────────── v0.5.12 Installed Functors ──────────────────── v0.5.2 Installed Transducers ───────────────── v0.4.84 Installed AbstractMCMC ──────────────── v5.6.0 Installed Bijectors ─────────────────── v0.15.6 Installed Rmath ─────────────────────── v0.8.0 Installed ArnoldiMethod ─────────────── v0.4.0 Installed ConsoleProgressMonitor ────── v0.1.2 Installed ArgCheck ──────────────────── v2.5.0 Installed HypergeometricFunctions ───── v0.3.28 Installed JSON ──────────────────────── v0.21.4 Installed MarkdownAST ───────────────── v0.1.2 Installed PtrArrays ─────────────────── v1.3.0 Installed StatsFuns ─────────────────── v1.4.0 Installed TableTraits ───────────────── v1.0.1 Installed Preferences ───────────────── v1.4.3 Installed Accessors ─────────────────── v0.1.42 Installed Expat_jll ─────────────────── v2.6.5+0 Installed OpenSSL_jll ───────────────── v3.0.16+0 Installed Inflate ───────────────────── v0.1.5 Installed LoggingExtras ─────────────── v1.1.0 Installed ProgressLogging ───────────── v0.1.4 Installed AbstractPPL ───────────────── v0.10.1 Installed SpecialFunctions ──────────── v2.5.0 Installed IOCapture ─────────────────── v0.2.5 Installed Parsers ───────────────────── v2.8.1 Installed PDMats ────────────────────── v0.11.33 Installed Tables ────────────────────── v1.12.0 Installed DataAPI ───────────────────── v1.16.0 Installed Setfield ──────────────────── v1.1.2 Installed Baselet ───────────────────── v0.1.1 Installed Git_jll ───────────────────── v2.49.0+0 Installed JuliaSyntax ───────────────── v0.4.10 Installed JLLWrappers ───────────────── v1.7.0 Installed ProgressMeter ─────────────── v1.10.4 Installed StaticArrays ──────────────── v1.9.13 Installed StaticArraysCore ──────────── v1.4.3 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed ConstructionBase ──────────── v1.5.8 Installed Roots ─────────────────────── v2.2.7 Installed PrecompileTools ───────────── v1.2.1 Installed DataValueInterfaces ───────── v1.0.0 Installed DefineSingletons ──────────── v0.1.2 Installed MicroCollections ──────────── v0.2.0 Installed Documenter ────────────────── v1.10.1 Installed OrderedCollections ────────── v1.8.0 Installed AbstractTrees ─────────────── v0.4.5 Installed InitialValues ─────────────── v0.3.1 Installed TranscodingStreams ────────── v0.11.3 Installed ChainRulesCore ────────────── v1.25.1 Installed FillArrays ────────────────── v1.13.0 Installed TerminalLoggers ───────────── v0.1.7 Installed QuadGK ────────────────────── v2.11.2 Installed FileIO ────────────────────── v1.17.0 Installed Reexport ──────────────────── v1.2.2 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed Statistics ────────────────── v1.11.1 Installed SplittablesBase ───────────── v0.1.15 Installed LogExpFunctions ───────────── v0.3.29 Installed LazilyInitializedFields ───── v1.3.0 Installed DataStructures ────────────── v0.18.22 Installed Requires ──────────────────── v1.3.1 Installed Graphs ────────────────────── v1.12.1 Installed MappedArrays ──────────────── v0.4.2 Installed LeftChildRightSiblingTrees ── v0.2.0 Installed AliasTables ───────────────── v1.1.3 Installed BangBang ──────────────────── v0.4.4 Installed MacroTools ────────────────── v0.5.15 Installed MetaGraphsNext ────────────── v0.7.3 Installed LogDensityProblemsAD ──────── v1.13.0 Installed StatsAPI ──────────────────── v1.7.0 Installed Distributions ─────────────── v0.25.118 Installed Compat ────────────────────── v4.16.0 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed CompositionsBase ──────────── v0.1.2 Installed CommonSolve ───────────────── v0.2.4 Installed InverseFunctions ──────────── v0.1.17 Installed LogDensityProblems ────────── v2.1.2 Installed Git ───────────────────────── v1.3.1 Installed CodecZlib ─────────────────── v0.7.8 Installed StatsBase ─────────────────── v0.34.4 Installed Missings ──────────────────── v1.2.0 Installed SimpleTraits ──────────────── v0.9.4 Installed DensityInterface ──────────── v0.4.0 Installed ChangesOfVariables ────────── v0.1.9 Installed ANSIColoredPrinters ───────── v0.0.1 Installed DocStringExtensions ───────── v0.9.4 Installed SortingAlgorithms ─────────── v1.2.1 Installed JuliaBUGS ─────────────────── v0.9.0 Updating `~/.julia/environments/v1.11/Project.toml` [ba9fb4c0] + JuliaBUGS v0.9.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [80f14c24] + AbstractMCMC v5.6.0 ⌅ [7a57a42e] + AbstractPPL v0.10.1 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [76274a88] + Bijectors v0.15.6 [d360d2e6] + ChainRulesCore v1.25.1 [9e997f8a] + ChangesOfVariables v0.1.9 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.4 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.5.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [b429d917] + DensityInterface v0.4.0 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.4 [e30172f5] + Documenter v1.10.1 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.13.0 [d9f16b24] + Functors v0.5.2 [d7ba0133] + Git v1.3.1 [86223c79] + Graphs v1.12.1 [34004b35] + HypergeometricFunctions v0.3.28 [b5f81e59] + IOCapture v0.2.5 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.5.12 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [ba9fb4c0] + JuliaBUGS v0.9.0 ⌅ [70703baa] + JuliaSyntax v0.4.10 [0e77f7df] + LazilyInitializedFields v1.3.0 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.0 [6fdf6af0] + LogDensityProblems v2.1.2 [996a588d] + LogDensityProblemsAD v1.13.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [1914dd2f] + MacroTools v0.5.15 [dbb5928d] + MappedArrays v0.4.2 [d0879d2d] + MarkdownAST v0.1.2 [fa8bd995] + MetaGraphsNext v0.7.3 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.33 [69de0a69] + Parsers v2.8.1 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [33c8b6b6] + ProgressLogging v0.1.4 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [2792f1a3] + RegistryInstances v0.1.0 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.7 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.4 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.4.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [5d786b92] + TerminalLoggers v0.1.7 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.84 [2e619515] + Expat_jll v2.6.5+0 [f8c6e375] + Git_jll v2.49.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [efcefdf7] + PCRE2_jll v10.42.0+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 16.54s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 3409.0 ms ✓ TestEnv 1 dependency successfully precompiled in 4 seconds. 23 already precompiled. Precompiling package dependencies... Precompilation completed after 696.45s ################################################################################ # Testing # Testing JuliaBUGS Status `/tmp/jl_rsgT0V/Project.toml` [47edcb42] ADTypes v1.14.0 [80f14c24] AbstractMCMC v5.6.0 ⌅ [7a57a42e] AbstractPPL v0.10.1 [7d9f7c33] Accessors v0.1.42 ⌅ [0bf59076] AdvancedHMC v0.6.4 [5b7e9947] AdvancedMH v0.8.6 [198e06fe] BangBang v0.4.4 [76274a88] Bijectors v0.15.6 [082447d4] ChainRules v1.72.3 [31c24e10] Distributions v0.25.118 [e30172f5] Documenter v1.10.1 [86223c79] Graphs v1.12.1 [682c06a0] JSON v0.21.4 [ba9fb4c0] JuliaBUGS v0.9.0 ⌅ [70703baa] JuliaSyntax v0.4.10 [6fdf6af0] LogDensityProblems v2.1.2 [996a588d] LogDensityProblemsAD v1.13.0 [2ab3a3ac] LogExpFunctions v0.3.29 [c7f686f2] MCMCChains v6.0.7 [1914dd2f] MacroTools v0.5.15 [fa8bd995] MetaGraphsNext v0.7.3 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.33 [37e2e3b7] ReverseDiff v1.16.1 [276daf66] SpecialFunctions v2.5.0 [90137ffa] StaticArrays v1.9.13 [10745b16] Statistics v1.11.1 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [9e88b42a] Serialization v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_rsgT0V/Manifest.toml` [47edcb42] ADTypes v1.14.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [80f14c24] AbstractMCMC v5.6.0 ⌅ [7a57a42e] AbstractPPL v0.10.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 ⌅ [0bf59076] AdvancedHMC v0.6.4 [5b7e9947] AdvancedMH v0.8.6 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 [198e06fe] BangBang v0.4.4 [9718e550] Baselet v0.1.1 [76274a88] Bijectors v0.15.6 [082447d4] ChainRules v1.72.3 [d360d2e6] ChainRulesCore v1.25.1 [9e997f8a] ChangesOfVariables v0.1.9 [944b1d66] CodecZlib v0.7.8 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.5.8 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [e30172f5] Documenter v1.10.1 [7a1cc6ca] FFTW v1.8.1 [5789e2e9] FileIO v1.17.0 [1a297f60] FillArrays v1.13.0 ⌃ [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [d7ba0133] Git v1.3.1 [86223c79] Graphs v1.12.1 [34004b35] HypergeometricFunctions v0.3.28 [b5f81e59] IOCapture v0.2.5 [d25df0c9] Inflate v0.1.5 [22cec73e] InitialValues v0.3.1 [505f98c9] InplaceOps v0.3.0 [a98d9a8b] Interpolations v0.15.1 [8197267c] IntervalSets v0.7.10 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.12 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [ba9fb4c0] JuliaBUGS v0.9.0 ⌅ [70703baa] JuliaSyntax v0.4.10 [5ab0869b] KernelDensity v0.6.9 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [1d6d02ad] LeftChildRightSiblingTrees v0.2.0 [6fdf6af0] LogDensityProblems v2.1.2 [996a588d] LogDensityProblemsAD v1.13.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [c7f686f2] MCMCChains v6.0.7 [be115224] MCMCDiagnosticTools v0.3.14 [e80e1ace] MLJModelInterface v1.11.0 [1914dd2f] MacroTools v0.5.15 [dbb5928d] MappedArrays v0.4.2 [d0879d2d] MarkdownAST v0.1.2 [fa8bd995] MetaGraphsNext v0.7.3 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [77ba4419] NaNMath v1.1.3 [c020b1a1] NaturalSort v1.0.0 [6fe1bfb0] OffsetArrays v1.16.0 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.33 [69de0a69] Parsers v2.8.1 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [33c8b6b6] ProgressLogging v0.1.4 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [37e2e3b7] ReverseDiff v1.16.1 [79098fc4] Rmath v0.8.0 [f2b01f46] Roots v2.2.7 [30f210dd] ScientificTypesBase v3.0.0 [efcf1570] Setfield v1.1.2 [699a6c99] SimpleTraits v0.9.4 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.1 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.0 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [64bff920] StatisticalTraits v3.4.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.4.0 [892a3eda] StringManipulation v0.4.1 [09ab397b] StructArrays v0.7.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [5d786b92] TerminalLoggers v0.1.7 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.84 [efce3f68] WoodburyMatrices v1.0.0 [2e619515] Expat_jll v2.6.5+0 [f5851436] FFTW_jll v3.3.11+0 [f8c6e375] Git_jll v2.49.0+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.0.1+1 [458c3c95] OpenSSL_jll v3.0.16+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [efcefdf7] PCRE2_jll v10.42.0+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... [ Info: progress logging is disabled globally [ Info: Running tests for groups: all ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. │ Unless this is due to a configuration error, the relevant variable should be set explicitly. └ @ Documenter ~/.julia/packages/Documenter/tbj1p/src/utilities/utilities.jl:660 [ Info: SetupBuildDirectory: setting up build directory. [ Info: Doctest: running doctests. [ Info: Skipped ExpandTemplates step (doctest only). [ Info: Skipped CrossReferences step (doctest only). [ Info: Skipped CheckDocument step (doctest only). [ Info: Skipped Populate step (doctest only). [ Info: Skipped RenderDocument step (doctest only). Test Summary: | Pass Total Time Unit Tests | 5 5 1m10.6s Test Summary: | Pass Total Time Parser | 91 91 1m01.5s Test Summary: | Pass Total Time CollectVariables Error Cases | 4 4 6.4s Test Summary: | Pass Total Time is_specified_by_data | 14 14 0.6s ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'a' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 Test Summary: | Pass Total Time Constant propagation | 5 5 7.0s Test Summary: | Pass Total Time CheckRepeatedAssignments | 7 7 13.7s ┌ Warning: In BUGS, if the lower bound of for loop is greater than the upper bound, the loop will be skipped. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:25 Test Summary: | Pass Total Time lower bound greater than upper bound | 2 2 6.6s ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'xa[1, 1]' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'rtx[1, 1]' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'T[1, 1]' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'z[1, 1]' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'log.Base4[1]' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 ┌ Warning: In BUGS, if the lower bound of for loop is greater than the upper bound, the loop will be skipped. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:25 ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'r[1, 1]' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 ┌ Warning: In BUGS, if the lower bound of for loop is greater than the upper bound, the loop will be skipped. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:25 ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'Y[1, 1]' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'Y[1, 1]' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 Test Summary: | Total Time BUGS examples volume 1 | 0 7m52.3s ┌ Warning: `cholesky(A::Union{StridedMatrix, RealHermSymComplexHerm{<:Real, <:StridedMatrix}}, ::Val{false}; check::Bool = true)` is deprecated, use `cholesky(A, NoPivot(); check)` instead. │ caller = #rrule#1203 at factorization.jl:498 [inlined] └ @ Core ~/.julia/packages/ChainRules/Q16hj/src/rulesets/LinearAlgebra/factorization.jl:498 ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'b' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 Test Summary: | Pass Total Time Some corner cases | 16 16 2m07.2s Test Summary: | Pass Total Time Log density | 22 22 27.5s ┌ Warning: In BUGS, if the lower bound of for loop is greater than the upper bound, the loop will be skipped. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:25 ┌ Warning: Variables that can be directly computed from data are considered 'transformed data' in BUGS. │ These variables won't appear in the probabilistic graph. │ In this model, 'xa[1, 1]' is one such variable. │ There may be others, but this warning is only shown once. │ If you're not working with existing BUGS programs, consider pre-computing these variables in Julia for efficiency. └ @ JuliaBUGS ~/.julia/packages/JuliaBUGS/iDTyw/src/compiler_pass.jl:516 Test Summary: | Pass Total Time Log density of BUGS models | 16 16 12.6s Test Summary: | Pass Total Time serialization | 374 374 10.9s Test Summary: | Pass Total Time controlling sampling behavior for conditioned variables | 4 4 4.8s Test Summary: | Pass Total Time `evaluate!!` is actually modifying returned `evaluation_env` | 1 1 10.6s Test Summary: | Pass Total Time logprior and loglikelihood | 3 3 10.7s Test Summary: | Pass Total Time Simple gibbs | 5 5 5m30.0s [ Info: Found initial step size 0.8 Sampling 0%| | ETA: 5:53:08 iterations: 2 ratio_divergent_transitions: 0.0 ratio_divergent_transitions_during_adaption: 0.0 n_steps: 15 is_accept: true acceptance_rate: 0.9882523294725387 log_density: -21.8508764199375 hamiltonian_energy: 22.67591114000162 hamiltonian_energy_error: 0.018681686468326575 max_hamiltonian_energy_error: 0.055138893056817295 tree_depth: 4 numerical_error: false step_size: 0.27456685040283435 nom_step_size: 0.27456685040283435 is_adapt: false mass_matrix: DiagEuclideanMetric([0.10898100061370491, 0.007 ...])                                   Sampling 100%|███████████████████████████████| Time: 0:00:23 iterations: 2000 ratio_divergent_transitions: 0.0 ratio_divergent_transitions_during_adaption: 0.0 n_steps: 15 is_accept: true acceptance_rate: 0.9795702328714987 log_density: -20.492341080540122 hamiltonian_energy: 24.132818541341276 hamiltonian_energy_error: -0.21859112940475 max_hamiltonian_energy_error: -0.3992639049726847 tree_depth: 3 numerical_error: false step_size: 0.27456685040283435 nom_step_size: 0.27456685040283435 is_adapt: false mass_matrix: DiagEuclideanMetric([0.10898100061370491, 0.007 ...]) [ Info: Found initial step size 1.6 ┌ Warning: The level of numerical errors is high. Please check the model carefully. └ @ AdvancedHMC ~/.julia/packages/AdvancedHMC/9NhHg/src/abstractmcmc.jl:275 Sampling 20%|██████▎ | ETA: 0:00:30 iterations: 2 ratio_divergent_transitions: 0.5 ratio_divergent_transitions_during_adaption: 0.5 n_steps: 1 is_accept: true acceptance_rate: 0.0 log_density: -21.892133541985064 hamiltonian_energy: 27.503723900876295 hamiltonian_energy_error: 0.0 max_hamiltonian_energy_error: 2.1750609626589446e9 tree_depth: 0 numerical_error: true step_size: 3.7361178729611977 nom_step_size: 3.7361178729611977 is_adapt: false mass_matrix: DiagEuclideanMetric([1.0, 1.0, 1.0, 1.0, 1.0, 1 ...])                 ┌ Warning: The level of numerical errors is high. Please check the model carefully. └ @ AdvancedHMC ~/.julia/packages/AdvancedHMC/9NhHg/src/abstractmcmc.jl:275 ┌ Warning: The level of numerical errors is high. Please check the model carefully. └ @ AdvancedHMC ~/.julia/packages/AdvancedHMC/9NhHg/src/abstractmcmc.jl:275                  Sampling 100%|███████████████████████████████| Time: 0:00:07 iterations: 10 ratio_divergent_transitions: 0.9 ratio_divergent_transitions_during_adaption: 0.1 n_steps: 1 is_accept: true acceptance_rate: 0.0 log_density: -21.892133541985064 hamiltonian_energy: 28.14216499839734 hamiltonian_energy_error: 0.0 max_hamiltonian_energy_error: 6.514727611643664e12 tree_depth: 0 numerical_error: true step_size: 3.7361178729611977 nom_step_size: 3.7361178729611977 is_adapt: false mass_matrix: DiagEuclideanMetric([1.0, 1.0, 1.0, 1.0, 1.0, 1 ...]) Test Summary: | Pass Total Time MCMCChains extension | 13 13 1m18.5s ┌ Warning: `VarName(sym::Symbol)` is deprecated, use `VarName{sym}()` instead. │ caller = ip:0x0 └ @ Core :-1 Test Summary: | Pass Total Time BayesianNetwork | 99 99 17.4s Testing JuliaBUGS tests passed Testing completed after 1379.02s PkgEval succeeded after 2130.81s