Package evaluation of JobSchedulers on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T12:04:02.743 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.14s ################################################################################ # Installation # Installing JobSchedulers... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [eeff360b] + JobSchedulers v0.11.8 Updating `~/.julia/environments/v1.11/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [da1fd8a2] + CodeTracking v1.3.9 [34da2185] + Compat v4.16.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [ffbed154] + DocStringExtensions v0.9.4 [5789e2e9] + FileIO v1.17.0 [48062228] + FilePathsBase v0.9.24 [eafb193a] + Highlights v0.5.3 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.5.12 [682c06a0] + JSON v0.21.4 [eeff360b] + JobSchedulers v0.11.8 [b964fa9f] + LaTeXStrings v1.4.0 [1914dd2f] + MacroTools v0.5.15 [1c23619d] + MyterialColors v0.3.0 [bac558e1] + OrderedCollections v1.8.0 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.1 [ef544631] + Pipelines v0.11.1 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [33c8b6b6] + ProgressLogging v0.1.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [22787eb5] + Term v2.0.7 [5a1048b7] + Terming v0.2.6 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [83775a58] + Zlib_jll v1.2.13+1 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 3.8s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 189.66s ################################################################################ # Testing # Testing JobSchedulers Status `/tmp/jl_mfwAVA/Project.toml` [864edb3b] DataStructures v0.18.22 [033835bb] JLD2 v0.5.12 [682c06a0] JSON v0.21.4 [eeff360b] JobSchedulers v0.11.8 [ef544631] Pipelines v0.11.1 ⌅ [aea7be01] PrecompileTools v1.2.1 [08abe8d2] PrettyTables v2.4.0 [189a3867] Reexport v1.2.2 [22787eb5] Term v2.0.7 [5a1048b7] Terming v0.2.6 [ade2ca70] Dates v1.11.0 [56ddb016] Logging v1.11.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_mfwAVA/Manifest.toml` [1520ce14] AbstractTrees v0.4.5 [da1fd8a2] CodeTracking v1.3.9 [34da2185] Compat v4.16.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [ffbed154] DocStringExtensions v0.9.4 [5789e2e9] FileIO v1.17.0 [48062228] FilePathsBase v0.9.24 [eafb193a] Highlights v0.5.3 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.12 [682c06a0] JSON v0.21.4 [eeff360b] JobSchedulers v0.11.8 [b964fa9f] LaTeXStrings v1.4.0 [1914dd2f] MacroTools v0.5.15 [1c23619d] MyterialColors v0.3.0 [bac558e1] OrderedCollections v1.8.0 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.1 [ef544631] Pipelines v0.11.1 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [33c8b6b6] ProgressLogging v0.1.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [22787eb5] Term v2.0.7 [5a1048b7] Terming v0.2.6 [3bb67fe8] TranscodingStreams v0.11.3 [3a884ed6] UnPack v1.0.2 [1cfade01] UnicodeFun v0.4.1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [83775a58] Zlib_jll v1.2.13+1 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... [ Info: Scheduler task is running. [ Info: Scheduler reactivation task is running. ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ee103850 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ecd881a0 [ Info: Scheduler task stops. ┌ Warning: Scheduler reactivation task is not running. └ @ JobSchedulers ~/.julia/packages/JobSchedulers/ubUUH/src/control.jl:92 ┌ Info: Scheduler is not running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (done) @0x00007af4ee103850 └ SCHEDULER_REACTIVATION_TASK[] = Task (done) @0x00007af4ecd881a0 ┌ Warning: Scheduler task was interrupted or done. Restart. └ @ JobSchedulers ~/.julia/packages/JobSchedulers/ubUUH/src/control.jl:61 ┌ Warning: Scheduler reactivation task was interrupted or done. Restart. └ @ JobSchedulers ~/.julia/packages/JobSchedulers/ubUUH/src/control.jl:61 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 Job: id → 8541625692397790 name → "high_priority" user → "" ncpu → 1.0 mem → 0 B schedule_time → na submit_time → na start_time → na stop_time → na wall_time → 1 year cron → Cron(:none) until → forever state → :queuing priority → 0 dependency → [] stdout → nothing stderr → nothing task → Task (runnable) @0x00007af4c5c2d2d0 [ Info: scheduler_balance_check: wait_queue: job submission highpriority ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 [ Info: submit!(job2) [ Info: cancel!(job2) [ Info: scheduler_balance_check: wait_queue: job cancellation highpriority midpriority lowpriority 1 2 3 4 5 6 7 8 9 10 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 ┌ Warning: ncpu > 1 for Job(task::Task) is not fully supported if the task uses multi-threads (except for running threaded commands), it is recommended to split it into different jobs. Job: job with args. └ @ JobSchedulers ~/.julia/packages/JobSchedulers/ubUUH/src/jobs.jl:121 job_no_cpu ok dep1 ok dep2 ok job with dep1 and dep2 ok job with dep2 ok job with dep3 ok [ Info: 2025-04-08 12:09:19 Scheduler backup done: /tmp/jl_job_scheduler_backup [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: 2025-04-08 12:10:09 Scheduler backup done: /tmp/jl_job_scheduler_backup2 [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup2) [ Info: Stop scheduler backup. ┌ Warning: The following will show method error of + └ @ Main ~/.julia/packages/JobSchedulers/ubUUH/test/runtests.jl:226 ┌ Warning: The current Julia session only supports single-thread JobSchedulers. Submitting a JuliaProgram with this Julia session is not recommended because it might block schedulers and parallel jobs. Starting Julia with multiple *default* threads is suggested. JobSchedulers do not use interactive thread pool. Help: https://docs.julialang.org/en/v1/manual/multi-threading/#Starting-Julia-with-multiple-threads └ @ JobSchedulers ~/.julia/packages/JobSchedulers/ubUUH/src/compat_pipelines.jl:5 ┌ Info: 2025-04-08 12:10:18 Started: Command Program │ command_template = `echo INPUT1 INPUT2` │ run_id = Base.UUID("5c48891b-9404-5ec6-a795-2429b39fb940") │ inputs = Dict{String, Any} with 2 entries: … └ outputs = Dict{String, Any}() Hello, Pipeline.jl ┌ Info: 2025-04-08 12:10:21 Finished: Command Program │ command_running = `echo Hello, Pipeline.jl` │ run_id = Base.UUID("5c48891b-9404-5ec6-a795-2429b39fb940") │ inputs = Dict{String, Any} with 2 entries: … └ outputs = Dict{String, Any}() ┌ Info: 2025-04-08 12:10:21 Started: Command Program │ command_template = `echo INPUT1 INPUT2` │ run_id = Base.UUID("5c48891b-9404-5ec6-a795-2429b39fb940") │ inputs = Dict{String, Any} with 2 entries: … └ outputs = Dict{String, Any}() Hello, Pipeline.jl ┌ Info: 2025-04-08 12:10:21 Finished: Command Program │ command_running = `echo Hello, Pipeline.jl` │ run_id = Base.UUID("5c48891b-9404-5ec6-a795-2429b39fb940") │ inputs = Dict{String, Any} with 2 entries: … └ outputs = Dict{String, Any}() ┌ Info: 2025-04-08 12:10:22 Started: Julia Program with Errors │ run_id = Base.UUID("35f6b504-9009-5a6e-b9e9-116071f60a7b") │ inputs = │ Dict{String, Any} with 2 entries: │ "b" => 5 │ "a" => 10.6 └ outputs = Dict{String, Any}() ┌ Error: 2025-04-08 12:10:23 ProgramRunningError: Julia Program with Errors: fail to run the main function. │ run_id = Base.UUID("35f6b504-9009-5a6e-b9e9-116071f60a7b") │ inputs = │ Dict{String, Any} with 2 entries: │ "b" => 5 │ "a" => 10.6 └ outputs = Dict{String, Any}() MethodError: no method matching +(::Int64, ::String) The function `+` exists, but no method is defined for this combination of argument types. Closest candidates are: +(::Any, ::Any, !Matched::Any, !Matched::Any...) @ Base operators.jl:596 +(::Real, !Matched::Complex{Bool}) @ Base complex.jl:322 +(::Integer, !Matched::AbstractChar) @ Base char.jl:247 ... Stacktrace: [1] (::var"#17#35")(inputs::Dict{String, Any}, outputs::Dict{String, Any}) @ Main ~/.julia/packages/JobSchedulers/ubUUH/test/runtests.jl:223 [2] _run(p::JuliaProgram; inputs::Dict{String, Any}, outputs::Dict{String, Any}, skip_when_done::Bool, check_dependencies::Bool, verbose::Bool, touch_run_id_file::Bool, dry_run::Bool, dir::String, _do_xxputs_completion_and_check::Bool) @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/JuliaProgram.jl:264 [3] (::Pipelines.var"#35#36"{Int64, Bool, @Kwargs{_do_xxputs_completion_and_check::Bool, inputs::Dict{String, Any}, outputs::Dict{String, Any}, touch_run_id_file::Bool}, JuliaProgram})() @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/Program.jl:304 [4] try_function(f::Pipelines.var"#35#36"{Int64, Bool, @Kwargs{_do_xxputs_completion_and_check::Bool, inputs::Dict{String, Any}, outputs::Dict{String, Any}, touch_run_id_file::Bool}, JuliaProgram}, ::Nothing) @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/redirection.jl:151 [5] #redirect_to_files#7 @ ~/.julia/packages/Pipelines/CkayS/src/redirection.jl:223 [inlined] [6] redirect_to_files @ ~/.julia/packages/Pipelines/CkayS/src/redirection.jl:200 [inlined] [7] run(p::JuliaProgram; dir::String, retry::Int64, stdout::Nothing, stderr::Nothing, stdlog::Nothing, append::Bool, _do_parse_program_args::Bool, kwarg::@Kwargs{_do_xxputs_completion_and_check::Bool, inputs::Dict{String, Any}, outputs::Dict{String, Any}, touch_run_id_file::Bool}) @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/Program.jl:297 [8] (::JobSchedulers.var"#f#132"{Nothing, Nothing, String, JuliaProgram, Vector{Pair{Symbol, Bool}}})() @ JobSchedulers ~/.julia/packages/JobSchedulers/ubUUH/src/compat_pipelines.jl:73 [9] (::JobSchedulers.var"#131#133"{Job, JobSchedulers.var"#f#132"{Nothing, Nothing, String, JuliaProgram, Vector{Pair{Symbol, Bool}}}})() @ JobSchedulers ~/.julia/packages/JobSchedulers/ubUUH/src/compat_pipelines.jl:83 [ Info: 2025-04-08 12:10:31 Started: Echo [7c9427a7-3fa6-598f-b1e9-3532b0cbd4b4] x = Dict{String, Any}("optional_arg" => :sym, "optional_arg2" => 0.5, "input" => :xxx, "input2" => 22) y = Dict{String, Any}("output" => "iout") [ Info: 2025-04-08 12:10:31 Finished: Echo [7c9427a7-3fa6-598f-b1e9-3532b0cbd4b4] [ Info: 2025-04-08 12:10:39 Started: Echo [42325ca5-7157-5bf0-bd28-38e587cd8fb4] inputs["NAME"] = "cihga39871" inputs["USER"] = "CJC" inputs["NCPU"] = 3 inputs["MEM"] = 666 [ Info: 2025-04-08 12:10:39 Finished: Echo [42325ca5-7157-5bf0-bd28-38e587cd8fb4] ┌ Warning: `JobSchedulers.SINGLE_THREAD_MODE[]` during testing. It will not test multi-thread related codes. └ @ Main ~/.julia/packages/JobSchedulers/ubUUH/test/runtests.jl:313 [ Info: scheduler_balance_check: wait_queue: thread ID test ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 ┌ Info: 2023-01-04 11:19:45 Started: prog │ command_template = `prog` │ run_id = UUID("39f4d9ab-046a-5184-a120-53a1a937fe13") │ inputs = │ Dict{String, Any} with 4 entries: │ "INPUT_SEQ" => "/path/3.xxx/SN005-… │ "OTHER_ARGS" => `` │ "DB" => "/path/Reference/prog-pluspfp-db-i… │ "THREADS" => 10 │ outputs = │ Dict{String, Any} with 4 entries: │ "UNCLASSIFIED_OUT" => "/path/3.1.yyy │ "REPORT" => "/path/3.1.yyy │ "OUTPUT" => "/path/3.1.yyy └ "CLASSIFIED_OUT" => "/path/3.1.yyy 8103 sequences (10.58 Mbp) processed in 0.888s (547.4 Kseq/m, 714.99 Mbp/m). 1876 sequences classified (23.15%) 6227 sequences unclassified (76.85%) ┌ Info: 2023-01-04 11:19:47 Finished: prog │ command_running = `prog` │ run_id = UUID("1742c504-4eef-5b06-8c1a-dcab689c6d1a") │ inputs = │ Dict{String, Any} with 4 entries: │ "INPUT_SEQ" => "/path/3.xxx/SN005-… │ "OTHER_ARGS" => `` │ "DB" => "/path/Reference/prog-pluspfp-db-i… │ "THREADS" => 10 │ outputs = │ Dict{String, Any} with 4 entries: │ "UNCLASSIFIED_OUT" => "/path/3.1.yyy │ "REPORT" => "/path/3.1.yyy │ "OUTPUT" => "/path/3.1.yyy └ "CLASSIFIED_OUT" => "/path/3.1.yyy ┌ Info: 2023-01-04 11:19:47 Started: prog │ command_template = `prog` │ run_id = UUID("1033dc81-c747-5987-8b43-ade755fc1eb7") │ inputs = │ Dict{String, Any} with 4 entries: │ "INPUT_SEQ" => "/path/3.xxx/SN005-… │ "OTHER_ARGS" => `` │ "DB" => "/path/Reference/prog-pluspfp-db-i… │ "THREADS" => 10 │ outputs = │ Dict{String, Any} with 4 entries: │ "UNCLASSIFIED_OUT" => "/path/3.1.yyy │ "REPORT" => "/path/3.1.yyy │ "OUTPUT" => "/path/3.1.yyy └ "CLASSIFIED_OUT" => "/path/3.1.yyy 12766 sequences (17.22 Mbp) processed in 1.243s (616.5 Kseq/m, 831.43 Mbp/m). 7363 sequences classified (57.68%) 5403 sequences unclassified (42.32%) ┌ Info: 2023-01-04 11:19:50 Finished: prog │ command_running = `prog` │ run_id = UUID("3b196da2-0ba7-5814-9cd3-fe85aeba3b23") │ inputs = │ Dict{String, Any} with 4 entries: │ "INPUT_SEQ" => "/path/3.xxx/SN005-… │ "OTHER_ARGS" => `` │ "DB" => "/path/Reference/prog-pluspfp-db-i… │ "THREADS" => 10 │ outputs = │ Dict{String, Any} with 4 entries: │ "UNCLASSIFIED_OUT" => "/path/3.1.yyy │ "REPORT" => "/path/3.1.yyy │ "OUTPUT" => "/path/3.1.yyy └ "CLASSIFIED_OUT" => "/path/3.1.yyy ▕ ▎ ▕▍▎ ▕█▎ ▕ ▎ ▕████████▎ ▕████████▎  0.00% ▕ ▎  98.50% ▕█████████▉▎  5.00% ▕▌ ▎  19.90% ▕█ ▎ stdout 1 stdout 2 stdout 3 stdout 4 stdout 5 stdout 6 stdout 7 stdout 8 stdout 9 stdout 10 ERROR: test stderr color 1 ERROR: test stderr color 2 ERROR: test stderr color 3 ERROR: test stderr color 4 ERROR: test stderr color 5 ERROR: test stderr color 6 ERROR: test stderr color 7 ERROR: test stderr color 8 ERROR: test stderr color 9 ERROR: test stderr color 10 [ Info: log 1 [ Info: log 2 [ Info: log 3 [ Info: log 4 [ Info: log 5 [ Info: log 6 [ Info: log 7 [ Info: log 8 [ Info: log 9 [ Info: log 10 CURRENT RESOURCES: CPU: 0.0/1 MEM: 0.00% NO JOB SUBMITTED. 30-element Vector{Job}: ┌─────┬────────────┬──────────────────┬──────────────────────┬───────┬──────┬───────┬──────────┬────────────┬────────────┬───────────┬───────────────┬─────────────┬───────────┬──────┬─────────┐ │ Row │ state │ id │ name │ user │ ncpu │ mem │ priority │ dependency │ start_time │ stop_time │ schedule_time │ submit_time │ wall_time │ cron │ until │ ├─────┼────────────┼──────────────────┼──────────────────────┼───────┼──────┼───────┼──────────┼────────────┼────────────┼───────────┼───────────────┼─────────────┼───────────┼──────┼─────────┤ │ 1 │ :failed │ 8541625693172962 │ "Julia Program with… │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:10:21 │ 12:10:28 │ na │ 12:10:20 │ 1 year │ │ forever │ │ 2 │ :cancelled │ 8541625692860607 │ "to_cancel2" │ "" │ 1.0 │ 0 B │ 20 │ [] │ na │ 12:08:09 │ na │ 12:08:09 │ 1 year │ │ forever │ │ 3 │ :cancelled │ 8541625692823662 │ "to_cancel" │ "" │ 1.0 │ 0 B │ 20 │ [] │ na │ 12:08:08 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 4 │ :done │ 8541625692340849 │ "task job" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:02 │ 12:08:03 │ na │ 12:08:01 │ 1 year │ │ forever │ │ 5 │ :done │ 8541625692375755 │ "function job" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:03 │ 12:08:04 │ na │ 12:08:01 │ 1 year │ │ forever │ │ 6 │ :done │ 8541625692549874 │ "batch: 2" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:17 │ 12:08:19 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 7 │ :done │ 8541625692632765 │ "batch: 5" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:23 │ 12:08:25 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 8 │ :done │ 8541625692670405 │ "batch: 6" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:25 │ 12:08:27 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 9 │ :done │ 8541625692728114 │ "batch: 8" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:29 │ 12:08:31 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 10 │ :done │ 8541625692963481 │ "dep: job_with_dep" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:41 │ 12:08:41 │ na │ 12:08:35 │ 1 year │ │ forever │ │ 11 │ :done │ 8541625693006136 │ "dep: job_with_dep" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:41 │ 12:08:41 │ na │ 12:08:35 │ 1 year │ │ forever │ │ 12 │ :done │ 8541625692306737 │ "command job" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:01 │ 12:08:02 │ na │ 12:08:00 │ 1 year │ │ forever │ │ 13 │ :done │ 8541625692522214 │ "batch: 1" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:15 │ 12:08:17 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 14 │ :done │ 8541625692586193 │ "batch: 3" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:19 │ 12:08:21 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 15 │ :done │ 8541625692787629 │ "batch: 10" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:33 │ 12:08:35 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 16 │ :done │ 8541625692894463 │ "dep: 1" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:36 │ 12:08:38 │ na │ 12:08:35 │ 1 year │ │ forever │ │ 17 │ :done │ 8541625692397790 │ "high_priority" │ "" │ 1.0 │ 0 B │ 0 │ [] │ 12:08:06 │ 12:08:08 │ na │ 12:08:05 │ 1 year │ │ forever │ │ 18 │ :done │ 8541625692418410 │ "low_priority" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:13 │ 12:08:15 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 19 │ :done │ 8541625692752529 │ "batch: 9" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:31 │ 12:08:33 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 20 │ :done │ 8541625692985516 │ "dep: job_with_dep" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:41 │ 12:08:41 │ na │ 12:08:35 │ 1 year │ │ forever │ │ 21 │ :done │ 8541625692452446 │ "high_priority" │ "" │ 1.0 │ 0 B │ 0 │ [] │ 12:08:09 │ 12:08:11 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 22 │ :done │ 8541625692483412 │ "mid_priority" │ "" │ 1.0 │ 0 B │ 15 │ [] │ 12:08:11 │ 12:08:13 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 23 │ :done │ 8541625692607433 │ "batch: 4" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:21 │ 12:08:23 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 24 │ :done │ 8541625692701255 │ "batch: 7" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:27 │ 12:08:29 │ na │ 12:08:08 │ 1 year │ │ forever │ │ 25 │ :done │ 8541625693040172 │ "dep: job_with_dep" │ "" │ 0.0 │ 0 B │ 20 │ [] │ 12:08:36 │ 12:08:36 │ na │ 12:08:36 │ 1 year │ │ forever │ │ 26 │ :done │ 8541625692928575 │ "dep: 2" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:08:38 │ 12:08:41 │ na │ 12:08:35 │ 1 year │ │ forever │ │ 27 │ :done │ 8541625693104994 │ "Command Program" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:10:13 │ 12:10:21 │ na │ 12:10:13 │ 1 year │ │ forever │ │ 28 │ :done │ 8541625693139106 │ "Command Program" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:10:21 │ 12:10:21 │ na │ 12:10:13 │ 1 year │ │ forever │ │ 29 │ :done │ 8541625693206818 │ "Echo" │ "" │ 1.0 │ 0 B │ 10 │ [] │ 12:10:29 │ 12:10:31 │ na │ 12:10:29 │ 1 year │ │ forever │ │ 30 │ :done │ 8541625693240674 │ "cihga39871" │ "CJC" │ 0.5 │ 666 B │ 10 │ [] │ 12:10:39 │ 12:10:39 │ na │ 12:10:39 │ 1 year │ │ forever │ └─────┴────────────┴──────────────────┴──────────────────────┴───────┴──────┴───────┴──────────┴────────────┴────────────┴───────────┴───────────────┴─────────────┴───────────┴──────┴─────────┘ [ Info: scheduler_balance_check: wait_queue: terminal tests ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 --- Recur Job Start at 2025-04-08T12:11:13.078 --- Recur Job Start at 2025-04-08T12:11:14.116 --- Recur Job Start at 2025-04-08T12:11:15.077 4-element Vector{Job}: ┌─────┬────────────┬──────────────────┬──────────────────────┬──────┬──────┬─────┬──────────┬────────────┬────────────┬───────────┬───────────────┬─────────────┬───────────┬─────────┬─────────┐ │ Row │ state │ id │ name │ user │ ncpu │ mem │ priority │ dependency │ start_time │ stop_time │ schedule_time │ submit_time │ wall_time │ cron │ until │ ├─────┼────────────┼──────────────────┼──────────────────────┼──────┼──────┼─────┼──────────┼────────────┼────────────┼───────────┼───────────────┼─────────────┼───────────┼─────────┼─────────┤ │ 1 │ :cancelled │ 8541625693468549 │ "recur print date t… │ "" │ 1.0 │ 0 B │ 20 │ [] │ na │ 12:11:15 │ 12:11:16 │ 12:11:15 │ 1 year │ Defined │ forever │ │ 2 │ :done │ 8541625693377660 │ "recur print date t… │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:11:13 │ 12:11:13 │ 12:11:13 │ 12:11:12 │ 1 year │ Defined │ forever │ │ 3 │ :done │ 8541625693414219 │ "recur print date t… │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:11:14 │ 12:11:14 │ 12:11:14 │ 12:11:13 │ 1 year │ Defined │ forever │ │ 4 │ :done │ 8541625693439524 │ "recur print date t… │ "" │ 1.0 │ 0 B │ 20 │ [] │ 12:11:15 │ 12:11:15 │ 12:11:15 │ 12:11:14 │ 1 year │ Defined │ forever │ └─────┴────────────┴──────────────────┴──────────────────────┴──────┴──────┴─────┴──────────┴────────────┴────────────┴───────────┴───────────────┴─────────────┴───────────┴─────────┴─────────┘ [ Info: scheduler_balance_check: wait_queue: recur job tests ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 [ Info: scheduler_balance_check: wait_queue: macro @submit tests ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x00007af4ec95bb70 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x00007af4ec95bd00 Test Summary: | Pass Total Time JobSchedulers | 535 535 3m30.0s Testing JobSchedulers tests passed Testing completed after 177.93s PkgEval succeeded after 460.63s