Package evaluation of JLD2 on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T08:42:50.906 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.71s ################################################################################ # Installation # Installing JLD2... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [033835bb] + JLD2 v0.5.12 Updating `~/.julia/environments/v1.11/Manifest.toml` [5789e2e9] + FileIO v1.17.0 [033835bb] + JLD2 v0.5.12 [1914dd2f] + MacroTools v0.5.15 [bac558e1] + OrderedCollections v1.8.0 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [ae029012] + Requires v1.3.1 [3bb67fe8] + TranscodingStreams v0.11.3 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [83775a58] + Zlib_jll v1.2.13+1 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 1.86s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 14.27s ################################################################################ # Testing # Testing JLD2 Status `/tmp/jl_GcYbJ5/Project.toml` [4c88cf16] Aqua v0.8.11 [523fee87] CodecBzip2 v0.8.5 [5ba52731] CodecLz4 v0.4.6 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.6 [5789e2e9] FileIO v1.17.0 [033835bb] JLD2 v0.5.12 [f8b46487] TestItemRunner v1.1.0 [3a884ed6] UnPack v1.0.2 [2a0f44e3] Base64 v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [44cfe95a] Pkg v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_GcYbJ5/Manifest.toml` [4c88cf16] Aqua v0.8.11 [523fee87] CodecBzip2 v0.8.5 [5ba52731] CodecLz4 v0.4.6 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.6 [34da2185] Compat v4.16.0 [5789e2e9] FileIO v1.17.0 [033835bb] JLD2 v0.5.12 [692b3bcd] JLLWrappers v1.7.0 [1914dd2f] MacroTools v0.5.15 [bac558e1] OrderedCollections v1.8.0 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [ae029012] Requires v1.3.1 [f8b46487] TestItemRunner v1.1.0 [1c621080] TestItems v1.0.0 [3bb67fe8] TranscodingStreams v0.11.3 [3a884ed6] UnPack v1.0.2 [6e34b625] Bzip2_jll v1.0.9+0 [5ced341a] Lz4_jll v1.10.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time BufferedReader | 1 1 2.9s [ Info: Mmap, uncompressed [ Info: Write time: 48.136968 seconds (11.43 M allocations: 564.089 MiB, 0.72% gc time, 99.55% compilation time) [ Info: Read time: 48.082399 seconds (8.31 M allocations: 414.719 MiB, 0.21% gc time, 99.73% compilation time) [ Info: IOStream, uncompressed [ Info: Write time: 26.361173 seconds (6.20 M allocations: 266.817 MiB, 0.48% gc time, 82.90% compilation time) [ Info: Read time: 24.203016 seconds (3.57 M allocations: 280.187 MiB, 0.44% gc time, 94.76% compilation time) [ Info: Mmap, compressed [ Info: Write time: 2.492622 seconds (1.10 M allocations: 78.078 MiB, 1.53% gc time, 66.28% compilation time) [ Info: Read time: 2.532844 seconds (921.52 k allocations: 73.133 MiB, 0.85% gc time, 95.86% compilation time) [ Info: IOStream, compressed [ Info: Write time: 6.329348 seconds (2.18 M allocations: 92.539 MiB, 0.35% gc time, 20.41% compilation time) [ Info: Read time: 3.581743 seconds (910.12 k allocations: 165.202 MiB, 1.23% gc time, 62.04% compilation time) [ Info: IOBuffer, uncompressed [ Info: Write time: 46.402119 seconds (16.90 M allocations: 847.185 MiB, 1.12% gc time, 98.84% compilation time) [ Info: Read time: 47.422403 seconds (10.87 M allocations: 665.545 MiB, 1.31% gc time, 99.72% compilation time) [ Info: IOBuffer, compressed [ Info: Write time: 2.435810 seconds (2.38 M allocations: 119.833 MiB, 1.09% gc time, 57.94% compilation time) [ Info: Read time: 2.179155 seconds (790.35 k allocations: 88.001 MiB, 0.91% gc time, 94.48% compilation time) Test Summary: | Pass Total Time Custom estimated Group size | 6 6 0.3s Test Summary: | Pass Total Time Repeatedly appending to file | 25 25 0.5s Test Summary: | Pass Total Time Base.keytype | 2 2 0.1s Test Summary: | Pass Total Time Show a group / file | 3 3 0.3s ┌ Warning: Assignment to `fn` in soft scope is ambiguous because a global variable by the same name exists: `fn` will be treated as a new local. Disambiguate by using `local fn` to suppress this warning or `global fn` to assign to the existing global variable. └ @ ~/.julia/packages/JLD2/phaon/test/consistency.jl:4 ┌ Warning: Assignment to `f` in soft scope is ambiguous because a global variable by the same name exists: `f` will be treated as a new local. Disambiguate by using `local f` to suppress this warning or `global f` to assign to the existing global variable. └ @ ~/.julia/packages/JLD2/phaon/test/consistency.jl:7 ┌ Warning: mmaparrays keyword is currently ignored └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/JLD2.jl:172 ┌ Warning: Opening file with ArgumentError failed, falling back to JLD2.MmapIO └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/JLD2.jl:153 Test Summary: | Pass Total Time load_object / save_object | 6 6 0.2s ┌ Warning: you passed a key as a symbol instead of a string, it has been automatically converted └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/fileio.jl:10 ┌ Warning: you passed a key as a symbol instead of a string, it has been automatically converted └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/fileio.jl:10 ┌ Warning: you passed a key as a symbol instead of a string, it has been automatically converted └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/fileio.jl:10 Test Summary: | Pass Total Time Recursive Immutable Types | 2 2 0.3s Test Summary: | Pass Total Time UnionAll in Union | 6 6 3.4s Test Summary: | Pass Total Time Tuple of Empty Structs | 2 2 0.3s Test Summary: | Pass Total Time Pointer Serialization | 2 2 1.0s Test Summary: | Pass Total Time jldsave API | 4 4 0.3s Test Summary: | Pass Total Time Object Deletion | 7 7 1.7s Test Summary: | Pass Total Time Issue #329 | 2 2 0.8s Test Summary: | Pass Total Time Issue #327 | 2 2 0.8s Test Summary: | Pass Total Time Long NTuples | 1 1 0.7s Test Summary: | Pass Total Time Explicit Type remapping | 4 4 1.6s Test Summary: | Pass Total Time Load incomplete mutable types | 2 2 0.4s Test Summary: | Pass Total Time Constant fields in mutable structs (>v1.8) - Issue #410 | 3 3 0.6s Test Summary: | Pass Total Time Issue #431 Identity-Preservation | 1 1 2.7s Test Summary: | Pass Total Time Issue #433 circular references with custom serialization | 1 1 0.4s Test Summary: | Pass Total Time Multi-threaded read | 11 11 0.3s Test Summary: | Pass Total Time Explicit `Upgrade`ing | 4 4 2.1s Test Summary: | Pass Total Time Issue #484 round-trip Tuple{Type{Int}} | 1 1 0.4s Test Summary: | Pass Total Time Issue #510 uninitialized Dicts | 1 1 0.9s Test Summary: | Pass Total Time Issue 486 store NTuple type with indeterminate length | 1 1 2.6s Test Summary: | Pass Total Time FileIO.load of (nested) groups | 5 5 1.2s Test Summary: | Pass Total Time Union{} in type signature Issue #532 | 1 1 0.6s Test Summary: | Pass Total Time Issue #536 reading directly after writing | 1 1 1.1s Test Summary: | Pass Total Time Issue #558 a struct with 256 fields | 1 1 6.9s Test Summary: | Pass Total Time Upgrading a struct that was formerly singleton | 3 3 0.3s Test Summary: | Pass Total Time Issue #628 Upgrading structs that contains unions | 6 6 6.0s Test Summary: | Pass Total Time Issue #571 Loading Vararg NTuples | 1 1 1.2s Test Summary: | Pass Total Time Disable committing datatypes | 5 5 0.3s WARNING: replacing module ModuleWithFunction. ┌ Warning: type Main.ModuleWithFunction.#fun does not exist in workspace; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:458 Test Summary: | Pass Total Time Missing Types in Tuples | 8 8 0.6s Test Summary: | Pass Total Time Storing an anonymous function | 1 1 0.4s Test Summary: | Pass Total Time Issue #601: Storing <: Function objects | 1 1 0.1s Test Summary: | Pass Total Time Issue #603 - reused objectids | 109861 109861 10.7s Test Summary: | Pass Total Time Issue #611 - non-initialized Symbol field | 2 2 0.0s Test Summary: | Pass Total Time Issue #619 - Number type turnaround | 26 26 0.5s Test Summary: | Pass Total Time save and load | 2 2 0.2s Test Summary: | Pass Total Time name collisions | 1 1 0.3s Test Summary: | Pass Total Time Nested modules | 7 7 8m12.1s Test Summary: | Pass Total Time isreconstructed | 5 5 0.0s Test Summary: | Pass Total Time Legacy Union Type | 2 2 0.8s Test Summary: | Pass Total Time Inline Union Representation | 10 10 12.4s Test Summary: | Pass Total Time Custom Serialization | 81 81 15.4s Test Summary: | Pass Total Time round trip Function values | 10 10 2.4s Test Summary: | Pass Total Time Compression with CodecZlib | 3 3 1.0s Test Summary: | Pass Total Time Compression with CodecBzip2 | 1 1 1.2s Test Summary: | Pass Total Time Compression with CodecLz4 | 1 1 1.4s Test Summary: | Pass Total Time Compression with CodecZstd | 1 1 1.2s Test Summary: | Pass Total Time Verify Correctness of Compressor | 2 2 0.8s Test Summary: | Pass Total Time issue #368 - dynamically loaded CodecZlib | 1 1 43.4s ┌ Warning: This array should be populated by a fill value. This is not (yet) implemented. └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/datasets.jl:76 ┌ Warning: File likely not written by JLD2. Skipping header verification. └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/file_header.jl:21 ┌ Warning: type A does not exist in workspace; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:574 Test Summary: | Pass Total Time HDF5 compat test files | 36 36 18.2s ┌ Warning: Opening file with JLD2.MmapIO failed, falling back to IOStream └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/JLD2.jl:153 ┌ Warning: Opening file with JLD2.MmapIO failed, falling back to IOStream └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/JLD2.jl:153 Test Summary: | Pass Total Time Opening corrupted files | 2 2 0.2s ┌ Warning: type Main.TestStruct does not exist in workspace; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:574 ┌ Warning: custom serialization of Dict{String,JLD2.ReconstructedStatic{:TestStruct, (:a,), Tuple{Int64}}} encountered, but the type does not exist in the workspace; the data will be read unconverted └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:108 ┌ Warning: type Pair{String,JLD2.ReconstructedStatic{:TestStruct, (:a,), Tuple{Int64}}} does not exist in workspace; interpreting Array{Pair{String,JLD2.ReconstructedStatic{:TestStruct, (:a,), Tuple{Int64}}}} as Array{Any} └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/datasets.jl:128 ┌ Warning: some parameters could not be resolved for type Pair{String,JLD2.ReconstructedStatic{:TestStruct, (:a,), Tuple{Int64}}}; reading as Pair{String, JLD2.ReconstructedStatic{:TestStruct, (:a,), Tuple{Int64}}} └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:566 ┌ Warning: custom serialization of Dict{String,Main.MTestStruct} encountered, but the type does not exist in the workspace; the data will be read unconverted └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:108 ┌ Warning: some parameters could not be resolved for type Pair{String,Main.MTestStruct}; reading as Pair{String, Any} └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:566 ┌ Warning: type Main.MTestStruct does not exist in workspace; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:574 Test Summary: | Pass Total Time Mutable Struct Reconstruction Issue #506 | 5 5 1.5s ┌ Warning: type Main.Foo{Main.Foo} does not exist in workspace; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:574 Test Summary: | Pass Total Time Issue #538 Reconstruction of UnionAll type parameter | 2 2 0.4s ┌ Warning: saved type Main.RecoverableChangesInStructs.C has field x::Int64, but workspace type has field x::Tuple{Int64, Int64}, and no applicable convert method exists; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:212 ┌ Warning: saved type Main.RecoverableChangesInStructs.D has field c::JLD2.ReconstructedStatic{Symbol("Main.RecoverableChangesInStructs.C"), (:x,), Tuple{Int64}}, but workspace type has field c::Main.RecoverableChangesInStructs.C, and no applicable convert method exists; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:212 Test Summary: | Pass Total Time Recoverable changes in structs, Issue #354 | 2 2 0.3s ┌ Warning: type Main.#fun#158 does not exist in workspace; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:458 ┌ Warning: custom serialization of Main.Readas.FooN{Main.#fun#158} encountered, but the type does not exist in the workspace; the data will be read unconverted └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:108 ┌ Warning: type Main.#fun#158 does not exist in workspace; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/phaon/src/data/reconstructing_datatypes.jl:458 Test Summary: | Pass Total Time readas api for struct upgrades | 4 4 8.9s Test Summary: | Pass Total Time plain reconstruction | 3 3 0.5s Test Summary: | Pass Total Time Reconstruct struct with singleton fields | 12 12 1.2s Test Summary: | Pass Total Time UnPack-Extension | 6 6 0.4s Test Summary: | Pass Total Time Dataset API | 4 4 3.4s Test Summary: | Pass Total Time Slicing & Updating | 12 12 4.0s Test Summary: | Pass Total Time Mmapped Arrays | 15 15 3.5s Test Summary: | Pass Total Time Early Allocation | 3 3 3.2s Test Summary: | Pass Total Time Write to IOBuffer | 2 2 3.4s Test Summary: | Pass Total Time Append to IOBuffer file | 3 3 1m04.5s Test Summary: | Pass Total Time Package | 11 11 47.3s Testing JLD2 tests passed Testing completed after 1178.52s PkgEval succeeded after 1217.51s