Package evaluation of GaussianMarkovRandomFields on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T21:47:39.572 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.1s ################################################################################ # Installation # Installing GaussianMarkovRandomFields... Resolving package versions... Installed Preconditioners ─ v0.6.1 Updating `~/.julia/environments/v1.11/Project.toml` [d5f06795] + GaussianMarkovRandomFields v0.1.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [14f7f29c] + AMD v0.5.3 ⌅ [2169fc97] + AlgebraicMultigrid v0.5.1 [66dad0bd] + AliasTables v1.1.3 [fa961155] + CEnum v0.5.0 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.1 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [187b0558] + ConstructionBase v1.5.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.4 [4e289a0a] + EnumX v1.0.5 [411431e0] + Extents v0.1.5 [c061ca5d] + Ferrite v1.0.0 [4f95f4f8] + FerriteGmsh v1.2.1 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [f6369f11] + ForwardDiff v0.10.38 [d5f06795] + GaussianMarkovRandomFields v0.1.0 [68eda718] + GeoFormatTypes v0.4.4 [cf35fbd7] + GeoInterface v1.4.1 [0edc0954] + GeoInterfaceMakie v0.1.9 [0329782f] + GeoInterfaceRecipes v1.0.2 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [705231aa] + Gmsh v0.3.1 [34004b35] + HypergeometricFunctions v0.3.28 [8197267c] + IntervalSets v0.7.10 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [a90b1aa1] + LibGEOS v0.9.4 [9c8b4983] + LightXML v0.9.1 [f5a24dde] + LimitedLDLFactorizations v0.5.1 [7a12625a] + LinearMaps v3.11.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 ⌃ [20f20a25] + MakieCore v0.8.12 [e1d29d7a] + Missings v1.2.0 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.21 [510215fc] + Observables v0.5.5 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.33 ⌅ [aea7be01] + PrecompileTools v1.2.1 [af69fa37] + Preconditioners v0.6.1 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.8.0 [fdea26ae] + SIMD v3.7.1 [a2af1166] + SortingAlgorithms v1.2.1 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.5.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.4.0 ⌅ [09ab397b] + StructArrays v0.6.21 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [48a634ad] + Tensors v1.16.2 [3bb67fe8] + TranscodingStreams v0.11.3 [4004b06d] + VTKBase v1.0.1 [64499a7a] + WriteVTK v1.21.1 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.4+0 [5ae413db] + EarCut_jll v2.2.4+0 [2e619515] + Expat_jll v2.6.5+0 [4fce6fc7] + FLTK_jll v1.3.8+0 [a3f928ae] + Fontconfig_jll v2.16.0+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [d604d12d] + GEOS_jll v3.13.1+1 [bd17208b] + GLU_jll v9.0.1+0 [78b55507] + Gettext_jll v0.21.0+0 [7746bdde] + Glib_jll v2.84.0+0 ⌅ [0234f1f7] + HDF5_jll v1.14.3+3 [e33a78d0] + Hwloc_jll v2.12.0+0 [aacddb02] + JpegTurbo_jll v3.1.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.7+0 [dd4b983a] + LZO_jll v2.10.3+0 [e9f186c6] + Libffi_jll v3.4.7+0 [d4300ac3] + Libgcrypt_jll v1.11.1+0 [7e76a0d4] + Libglvnd_jll v1.7.0+0 [7add5ba3] + Libgpg_error_jll v1.51.1+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.0+0 [38a345b3] + Libuuid_jll v2.41.0+0 [18c40d15] + LinearElasticity_jll v5.0.0+0 [d00139f3] + METIS_jll v5.1.3+0 [86086c02] + MMG_jll v5.6.0+0 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [baad4e97] + OCCT_jll v7.7.2+0 ⌅ [fe0851c0] + OpenMPI_jll v4.1.8+1 [458c3c95] + OpenSSL_jll v3.0.16+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [30392449] + Pixman_jll v0.44.2+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [a8d0f55d] + SCOTCH_jll v6.1.3+0 [02c8fc9c] + XML2_jll v2.13.6+1 [aed1982a] + XSLT_jll v1.1.43+0 [4f6342f7] + Xorg_libX11_jll v1.8.6+3 [0c0b7dd1] + Xorg_libXau_jll v1.0.12+0 [a3789734] + Xorg_libXdmcp_jll v1.1.5+0 [1082639a] + Xorg_libXext_jll v1.3.6+3 [d091e8ba] + Xorg_libXfixes_jll v6.0.0+0 [2c808117] + Xorg_libXft_jll v2.3.3+1 [d1454406] + Xorg_libXinerama_jll v1.1.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.11+1 [14d82f49] + Xorg_libpthread_stubs_jll v0.1.2+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.0+3 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [630162c2] + gmsh_jll v4.13.1+0 [477f73a3] + libaec_jll v1.1.3+0 [b53b4c65] + libpng_jll v1.6.47+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [781609d7] + GMP_jll v6.3.0+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [efcefdf7] + PCRE2_jll v10.42.0+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Preconditioners → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/a02fc23058e6264b0f73523e99e2dd1a20232dff/build.log` Installation completed after 13.54s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 204.92s ################################################################################ # Testing # Testing GaussianMarkovRandomFields Status `/tmp/jl_IfIHyL/Project.toml` [14f7f29c] AMD v0.5.3 [4c88cf16] Aqua v0.8.11 [31c24e10] Distributions v0.25.118 [c061ca5d] Ferrite v1.0.0 [4f95f4f8] FerriteGmsh v1.2.1 ⌅ [f6369f11] ForwardDiff v0.10.38 [d5f06795] GaussianMarkovRandomFields v0.1.0 [cf35fbd7] GeoInterface v1.4.1 ⌅ [5c1252a2] GeometryBasics v0.4.11 [705231aa] Gmsh v0.3.1 [42fd0dbc] IterativeSolvers v0.9.4 [a90b1aa1] LibGEOS v0.9.4 [7a12625a] LinearMaps v3.11.4 [af69fa37] Preconditioners v0.6.1 [e0db7c4e] ReTest v0.3.4 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.0 [48a634ad] Tensors v1.16.2 ⌅ [e88e6eb3] Zygote v0.6.76 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_IfIHyL/Manifest.toml` [14f7f29c] AMD v0.5.3 [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.3.0 ⌅ [2169fc97] AlgebraicMultigrid v0.5.1 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.11 [a9b6321e] Atomix v1.1.1 [fa961155] CEnum v0.5.0 [082447d4] ChainRules v1.72.3 [d360d2e6] ChainRulesCore v1.25.1 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.5.8 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [4e289a0a] EnumX v1.0.5 [411431e0] Extents v0.1.5 [c061ca5d] Ferrite v1.0.0 [4f95f4f8] FerriteGmsh v1.2.1 [1a297f60] FillArrays v1.13.0 [53c48c17] FixedPointNumbers v0.8.5 ⌅ [f6369f11] ForwardDiff v0.10.38 [0c68f7d7] GPUArrays v11.2.2 [46192b85] GPUArraysCore v0.2.0 [d5f06795] GaussianMarkovRandomFields v0.1.0 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v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling ReTest... 18975.0 ms ✓ ReTest 1 dependency successfully precompiled in 19 seconds. 14 already precompiled. Precompiling ZygoteDistancesExt... 8577.5 ms ✓ KernelAbstractions 2196.6 ms ✓ KernelAbstractions → SparseArraysExt 1727.5 ms ✓ KernelAbstractions → LinearAlgebraExt 1946.7 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 12530.2 ms ✓ GPUArrays 7189.3 ms ✓ Zygote → ZygoteDistancesExt 6 dependencies successfully precompiled in 36 seconds. 102 already precompiled. WARNING: Method definition _get_periodic_constraint(Any) in module GaussianMarkovRandomFieldsTests at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/test/spdes/test_matern.jl:7 overwritten at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/test/spatiotemporal/test_advection_diffusion.jl:8. WARNING: Method definition _get_dirichlet_constraint(Ferrite.Grid{1, C, T} where T<:Real where C<:(Ferrite.AbstractCell{refshape} where refshape<:(Ferrite.AbstractRefShape{refdim} where refdim)), Any, Any) in module GaussianMarkovRandomFieldsTests at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/test/spdes/test_matern.jl:22 overwritten at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/test/spatiotemporal/test_advection_diffusion.jl:23. Pass Main.GaussianMarkovRandomFieldsTests: GMRF | 50 AD Jacobian | 4 Zero map | 12 Outer product map | 9 Linear map with sqrt | 6 Cholesky Sqrt | 7 Symmetric block tridiagonal map | 18 SSM Bidiagonal map | 11 Full Cholesky Preconditioner | 7 Block Jacobi Preconditioner | 7 Tridiagonal block Gauss-Seidel preconditioners | 44 Test spatiotemporal preconditioner | 20 FEMDiscretization | 11 FEM Derivatives | 110 Info : Meshing 1D... 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Info : [ 0%] Meshing surface 1 (Plane, Frontal-Delaunay) Info : [ 60%] Meshing surface 2 (Plane, Frontal-Delaunay) Info : Done meshing 2D (Wall 0.630831s, CPU 0.62961s) Info : 11704 nodes 24965 elements Scattered mesh | 3 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 216 running 1 of 1 signal (10): User defined signal 1 _generic_matmatmul! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/linalg.jl:396 unknown function (ip: 0x7eb6af1e6a42) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 generic_matmatmul! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/linalg.jl:325 _mul! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:287 [inlined] mul! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:285 [inlined] mul! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:253 [inlined] * at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:114 [inlined] _tri_matmul at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:1144 _tri_matmul at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:1136 [inlined] * at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:1132 unknown function (ip: 0x7eb6af1bc55e) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 matern_mean_precision at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/src/spdes/matern.jl:155 unknown function (ip: 0x7eb6af0bfca1) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #discretize#98 at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/src/spdes/matern.jl:206 discretize at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/src/spdes/matern.jl:180 unknown function (ip: 0x7eb6af0afd56) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_body at /source/src/interpreter.c:562 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] #80 at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1154 unknown function (ip: 0x7eb6d43464d2) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 #invokelatest#2 at ./essentials.jl:1055 [inlined] invokelatest at ./essentials.jl:1052 [inlined] #153 at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:425 [inlined] run_work_thunk at /source/usr/share/julia/stdlib/v1.11/Distributed/src/process_messages.jl:70 unknown function (ip: 0x7eb6d434549b) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #remotecall_fetch#158 at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:450 remotecall_fetch at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:449 [inlined] #remotecall_fetch#162 at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:492 [inlined] remotecall_fetch at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:492 [inlined] #78 at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 unknown function (ip: 0x7eb6d4342d7f) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x762a7b73fcf2) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2142 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2082 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x762a7b7399ad) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1837 unknown function (ip: 0x762a7b72e23a) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x762a7b72df3d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x762a7b72d92d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x762a7b729dd6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x762a7c993249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x0000762a6f400010 Total snapshots: 1. Utilization: 0% ╎1 @Base/client.jl:531; _start() ╎ 1 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 1 @Base/Base.jl:557; include(mod::Module, _path::String) ╎ 1 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path::S… ╎ 1 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod::M… ╎ 1 @Base/boot.jl:430; eval ╎ ╎ 1 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 1 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 1 @Pkg/src/API.jl:147; test ╎ ╎ 1 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 1 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ ╎ 1 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec}; i… ╎ ╎ ╎ 1 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io::… ╎ ╎ ╎ 1 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vector… ╎ ╎ ╎ 1 …/src/Operations.jl:2007; test ╎ ╎ ╎ 1 …src/Operations.jl:2063; test(ctx::Pkg.Types.Context, pkgs::… ╎ ╎ ╎ ╎ 1 …src/Operations.jl:1837; kwcall(::@NamedTuple{preferences::… ╎ ╎ ╎ ╎ 1 …src/Operations.jl:1845; #sandbox#115 ╎ ╎ ╎ ╎ 1 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 1 @Base/file.jl:815; mktempdir(fn::Function, parent::Strin… ╎ ╎ ╎ ╎ 1 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#11… ╎ ╎ ╎ ╎ ╎ 1 …c/Operations.jl:1898; (::Pkg.Operations.var"#116#121"… ╎ ╎ ╎ ╎ ╎ 1 …c/Operations.jl:1789; with_temp_env(fn::Pkg.Operatio… ╎ ╎ ╎ ╎ ╎ 1 …/Operations.jl:1931; (::Pkg.Operations.var"#118#123… ╎ ╎ ╎ ╎ ╎ 1 @Base/env.jl:265; withenv(::Pkg.Operations.var"#131… ╎ ╎ ╎ ╎ ╎ 1 …Operations.jl:2082; (::Pkg.Operations.var"#131#13… ╎ ╎ ╎ ╎ ╎ ╎ 1 …Operations.jl:2142; subprocess_handler(cmd::Cmd,… ╎ ╎ ╎ ╎ ╎ ╎ 1 …se/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 1 …se/process.jl:694; wait(x::Base.Process, syncd… ╎ ╎ ╎ ╎ ╎ ╎ 1 …condition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 1 …condition.jl:130; wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 …ase/task.jl:1021; wait() ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 …ase/task.jl:1012; poptask(W::Base.Intrusiv… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 [216] signal 15: Terminated in expression starting at none:1 _generic_matmatmul! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/linalg.jl:396 unknown function (ip: 0x7eb6af1e6a42) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 generic_matmatmul! at /source/usr/share/julia/stdlib/v1.11/SparseArrays/src/linalg.jl:325 _mul! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:287 [inlined] mul! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:285 [inlined] mul! at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:253 [inlined] * at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:114 [inlined] _tri_matmul at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:1144 _tri_matmul at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:1136 [inlined] * at /source/usr/share/julia/stdlib/v1.11/LinearAlgebra/src/matmul.jl:1132 unknown function (ip: 0x7eb6af1bc55e) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 matern_mean_precision at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/src/spdes/matern.jl:155 unknown function (ip: 0x7eb6af0bfca1) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #discretize#98 at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/src/spdes/matern.jl:206 discretize at /home/pkgeval/.julia/packages/GaussianMarkovRandomFields/eXL3F/src/spdes/matern.jl:180 unknown function (ip: 0x7eb6af0afd56) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_body at /source/src/interpreter.c:562 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 poptask at ./task.jl:1012 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] #80 at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1154 unknown function (ip: 0x7eb6d43464d2) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 #invokelatest#2 at ./essentials.jl:1055 [inlined] invokelatest at ./essentials.jl:1052 [inlined] #153 at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:425 [inlined] run_work_thunk at /source/usr/share/julia/stdlib/v1.11/Distributed/src/process_messages.jl:70 unknown function (ip: 0x7eb6d434549b) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #remotecall_fetch#158 at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:450 remotecall_fetch at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:449 [inlined] #remotecall_fetch#162 at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:492 [inlined] remotecall_fetch at /source/usr/share/julia/stdlib/v1.11/Distributed/src/remotecall.jl:492 [inlined] #78 at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 unknown function (ip: 0x7eb6d4342d7f) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) Allocations: 162097510 (Pool: 162093600; Big: 3910); GC: 146 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 profile_printing_listener at ./Base.jl:577 #1190 at ./Base.jl:617 jfptr_YY.1190_76096.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) Allocations: 24404726 (Pool: 24400989; Big: 3737); GC: 25 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") error at ./error.jl:35 #schedule#761 at ./task.jl:884 schedule at ./task.jl:876 [inlined] uv_writecb_task at ./stream.jl:1200 jfptr_uv_writecb_task_67080.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jlcapi_uv_writecb_task_67543.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 uv_write at ./stream.jl:1081 unsafe_write at ./stream.jl:1154 write at ./strings/io.jl:248 [inlined] print at ./strings/io.jl:250 jfptr_print_48429.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 showerror at ./errorshow.jl:152 unknown function (ip: 0x762a7b74c2f6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _atexit at ./initdefs.jl:462 jfptr__atexit_69596.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] ijl_atexit_hook at /source/src/init.c:271 jl_exit_thread0_cb at /source/src/signals-unix.c:517 PkgEval terminated after 2724.97s: test duration exceeded the time limit