Package evaluation of GEOTRACES on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T16:16:00.219


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.43s


################################################################################
# Installation
#

Installing GEOTRACES...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [0fd43d8d] + GEOTRACES v0.3.2
    Updating `~/.julia/environments/v1.11/Manifest.toml`
⌅ [179af706] + CFTime v0.1.4
  [49dc2e85] + Calculus v0.5.2
⌅ [1fbeeb36] + CommonDataModel v0.2.5
  [34da2185] + Compat v4.16.0
  [187b0558] + ConstructionBase v1.5.8
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.7.0
  [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [b4f34e82] + Distances v0.10.12
  [49426c49] + FieldDefaults v0.3.2
  [bf96fef3] + FieldMetadata v0.3.1
  [0fd43d8d] + GEOTRACES v0.3.2
  [842dd82b] + InlineStrings v1.4.3
  [41ab1584] + InvertedIndices v1.3.1
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [b964fa9f] + LaTeXStrings v1.4.0
  [3da0fdf6] + MPIPreferences v0.1.11
  [1914dd2f] + MacroTools v0.5.15
⌅ [7eb4fadd] + Match v1.2.0
  [eff96d63] + Measurements v2.12.0
  [e1d29d7a] + Missings v1.2.0
⌅ [85f8d34a] + NCDatasets v0.12.17
  [32ce50af] + OceanographyCruises v0.2.8
  [bac558e1] + OrderedCollections v1.8.0
  [2dfb63ee] + PooledArrays v1.4.3
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [08abe8d2] + PrettyTables v2.4.0
  [3cdcf5f2] + RecipesBase v1.3.4
  [189a3867] + Reexport v1.2.2
  [91c51154] + SentinelArrays v1.4.8
  [efcf1570] + Setfield v1.1.2
  [a2af1166] + SortingAlgorithms v1.2.1
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.0
  [892a3eda] + StringManipulation v0.4.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [8c8f4381] + TravelingSalesmanHeuristics v0.3.4
  [1986cc42] + Unitful v1.22.0
  [6e34b625] + Bzip2_jll v1.0.9+0
⌅ [0234f1f7] + HDF5_jll v1.14.3+3
  [e33a78d0] + Hwloc_jll v2.12.0+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [7cb0a576] + MPICH_jll v4.3.0+1
  [f1f71cc9] + MPItrampoline_jll v5.5.3+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
⌅ [7243133f] + NetCDF_jll v400.902.208+0
⌅ [fe0851c0] + OpenMPI_jll v4.1.8+1
  [458c3c95] + OpenSSL_jll v3.0.16+0
  [02c8fc9c] + XML2_jll v2.13.6+1
  [3161d3a3] + Zstd_jll v1.5.7+1
  [477f73a3] + libaec_jll v1.1.3+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.6.0+0
  [e37daf67] + LibGit2_jll v1.7.2+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.6+0
  [14a3606d] + MozillaCACerts_jll v2023.12.12
  [4536629a] + OpenBLAS_jll v0.3.27+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.59.0+0
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 7.48s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 118.33s


################################################################################
# Testing
#

     Testing GEOTRACES
      Status `/tmp/jl_Gcg5UT/Project.toml`
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.22
  [0fd43d8d] GEOTRACES v0.3.2
⌅ [7eb4fadd] Match v1.2.0
  [eff96d63] Measurements v2.12.0
⌅ [85f8d34a] NCDatasets v0.12.17
  [32ce50af] OceanographyCruises v0.2.8
  [1986cc42] Unitful v1.22.0
  [ade2ca70] Dates v1.11.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_Gcg5UT/Manifest.toml`
⌅ [179af706] CFTime v0.1.4
  [49dc2e85] Calculus v0.5.2
⌅ [1fbeeb36] CommonDataModel v0.2.5
  [34da2185] Compat v4.16.0
  [187b0558] ConstructionBase v1.5.8
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [b4f34e82] Distances v0.10.12
  [49426c49] FieldDefaults v0.3.2
  [bf96fef3] FieldMetadata v0.3.1
  [0fd43d8d] GEOTRACES v0.3.2
  [842dd82b] InlineStrings v1.4.3
  [41ab1584] InvertedIndices v1.3.1
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [b964fa9f] LaTeXStrings v1.4.0
  [3da0fdf6] MPIPreferences v0.1.11
  [1914dd2f] MacroTools v0.5.15
⌅ [7eb4fadd] Match v1.2.0
  [eff96d63] Measurements v2.12.0
  [e1d29d7a] Missings v1.2.0
⌅ [85f8d34a] NCDatasets v0.12.17
  [32ce50af] OceanographyCruises v0.2.8
  [bac558e1] OrderedCollections v1.8.0
  [2dfb63ee] PooledArrays v1.4.3
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [08abe8d2] PrettyTables v2.4.0
  [3cdcf5f2] RecipesBase v1.3.4
  [189a3867] Reexport v1.2.2
  [91c51154] SentinelArrays v1.4.8
  [efcf1570] Setfield v1.1.2
  [a2af1166] SortingAlgorithms v1.2.1
  [90137ffa] StaticArrays v1.9.13
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
  [892a3eda] StringManipulation v0.4.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [8c8f4381] TravelingSalesmanHeuristics v0.3.4
  [1986cc42] Unitful v1.22.0
  [6e34b625] Bzip2_jll v1.0.9+0
⌅ [0234f1f7] HDF5_jll v1.14.3+3
  [e33a78d0] Hwloc_jll v2.12.0+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [7cb0a576] MPICH_jll v4.3.0+1
  [f1f71cc9] MPItrampoline_jll v5.5.3+0
  [9237b28f] MicrosoftMPI_jll v10.1.4+3
⌅ [7243133f] NetCDF_jll v400.902.208+0
⌅ [fe0851c0] OpenMPI_jll v4.1.8+1
  [458c3c95] OpenSSL_jll v3.0.16+0
  [02c8fc9c] XML2_jll v2.13.6+1
  [3161d3a3] Zstd_jll v1.5.7+1
  [477f73a3] libaec_jll v1.1.3+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
Test Summary: | Pass  Total   Time
Cruises       |    3      3  24.6s
Test Summary: | Pass  Total   Time
observations  |   24     24  39.2s
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs(defaultfunc::Function, kwargs::Base.Pairs{Symbol, AbstractVector, Tuple{Symbol, Symbol, Symbol}, @NamedTuple{station::Station, depths::Vector{Float32}, values::Vector{Quantity{Float32, 𝐍 𝐌^-1, Unitful.FreeUnits{(kg^-1, nmol), 𝐍 𝐌^-1, nothing}}}}}, T::Type) at FieldDefaults.jl:45
└ @ FieldDefaults ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs(defaultfunc::Function, kwargs::Base.Pairs{Symbol, AbstractVector, Tuple{Symbol, Symbol, Symbol}, @NamedTuple{station::Station, depths::Vector{Float32}, values::Vector{Quantity{Float32, 𝐍 𝐌^-1, Unitful.FreeUnits{(kg^-1, nmol), 𝐍 𝐌^-1, nothing}}}}}, T::Type) at FieldDefaults.jl:45
└ @ FieldDefaults ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs(defaultfunc::Function, kwargs::Base.Pairs{Symbol, AbstractVector, Tuple{Symbol, Symbol, Symbol}, @NamedTuple{station::Station, depths::Vector{Float32}, values::Vector{Quantity{Float32, 𝐍 𝐌^-1, Unitful.FreeUnits{(kg^-1, μmol), 𝐍 𝐌^-1, nothing}}}}}, T::Type) at FieldDefaults.jl:45
└ @ FieldDefaults ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs(defaultfunc::Function, kwargs::Base.Pairs{Symbol, AbstractVector, Tuple{Symbol, Symbol, Symbol}, @NamedTuple{station::Station, depths::Vector{Float32}, values::Vector{Quantity{Float32, 𝐍 𝐌^-1, Unitful.FreeUnits{(kg^-1, μmol), 𝐍 𝐌^-1, nothing}}}}}, T::Type) at FieldDefaults.jl:45
└ @ FieldDefaults ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs(defaultfunc::Function, kwargs::Base.Pairs{Symbol, AbstractVector, Tuple{Symbol, Symbol, Symbol}, @NamedTuple{station::Station, depths::Vector{Float32}, values::Vector{Quantity{Float32, NoDims, Unitful.FreeUnits{(‰,), NoDims, nothing}}}}}, T::Type) at FieldDefaults.jl:45
└ @ FieldDefaults ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs(defaultfunc::Function, kwargs::Base.Pairs{Symbol, AbstractVector, Tuple{Symbol, Symbol, Symbol}, @NamedTuple{station::Station, depths::Vector{Float32}, values::Vector{Quantity{Float32, NoDims, Unitful.FreeUnits{(‰,), NoDims, nothing}}}}}, T::Type) at FieldDefaults.jl:45
└ @ FieldDefaults ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
┌ Warning: use values(kwargs) and keys(kwargs) instead of kwargs.data and kwargs.itr
│   caller = insert_kwargs at FieldDefaults.jl:45 [inlined]
└ @ Core ~/.julia/packages/FieldDefaults/bVHub/src/FieldDefaults.jl:45
Test Summary: | Pass  Total   Time
transects     |   12     12  25.2s
Test Summary:    | Pass  Total  Time
helper functions |   15     15  1.4s
     Testing GEOTRACES tests passed 

Testing completed after 140.13s

PkgEval succeeded after 287.92s