Package evaluation of FocusedBlindDecon on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T07:40:46.440 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.88s ################################################################################ # Installation # Installing FocusedBlindDecon... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [3b47aaff] + FocusedBlindDecon v2.6.4 Updating `~/.julia/environments/v1.11/Manifest.toml` [3b47aaff] + FocusedBlindDecon v2.6.4 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [8dfed614] + Test v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Installation completed after 1.09s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.11/activate_set.jl:63 ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ expected package `Conv [eca63721]` to be registered │ Stacktrace: │ [1] pkgerror(msg::String) │ @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 │ [2] check_registered │ @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1325 [inlined] │ [3] up(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}, level::Pkg.Types.UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1628 │ [4] up(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; level::Pkg.Types.UpgradeLevel, mode::Pkg.Types.PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) │ @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:388 │ [5] up │ @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:362 [inlined] │ [6] up │ @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:164 [inlined] │ [7] #resolve#143 │ @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:394 [inlined] │ [8] resolve │ @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:393 [inlined] │ [9] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.11/activate_set.jl:68 │ [10] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.11/activate_set.jl:9 │ [11] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [12] include(mod::Module, _path::String) │ @ Base ./Base.jl:557 │ [13] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:323 │ [14] _start() │ @ Base ./client.jl:531 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling project... ✗ FocusedBlindDecon 0 dependencies successfully precompiled in 3 seconds. 10 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: FocusedBlindDecon Failed to precompile FocusedBlindDecon [3b47aaff-9524-5d9d-a292-eeb6a187c032] to "/home/pkgeval/.julia/compiled/v1.11/FocusedBlindDecon/jl_aHsS4J". ERROR: LoadError: ArgumentError: Package FocusedBlindDecon does not have Inversion in its dependencies: - You may have a partially installed environment. Try `Pkg.instantiate()` to ensure all packages in the environment are installed. - Or, if you have FocusedBlindDecon checked out for development and have added Inversion as a dependency but haven't updated your primary environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with FocusedBlindDecon Stacktrace: [1] macro expansion @ ./loading.jl:2299 [inlined] [2] macro expansion @ ./lock.jl:273 [inlined] [3] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [4] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [5] invoke_in_world @ ./essentials.jl:1086 [inlined] [6] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [7] include @ ./Base.jl:557 [inlined] [8] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2881 [9] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/FocusedBlindDecon/W7JRo/src/FocusedBlindDecon.jl:2 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 18.7s ################################################################################ # Testing # Testing FocusedBlindDecon Testing failed after 3.17s ERROR: LoadError: expected package `Conv [eca63721]` to be registered Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] check_registered @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1325 [inlined] [3] up(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}, level::Pkg.Types.UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1628 [4] up(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; level::Pkg.Types.UpgradeLevel, mode::Pkg.Types.PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:388 [5] up @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:362 [inlined] [6] up @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:164 [inlined] [7] #resolve#143 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:394 [inlined] [8] resolve @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:393 [inlined] [9] (::Pkg.Operations.var"#118#123"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#131#136"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, Pkg.Types.PackageSpec}, Pkg.Types.PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1914 [10] with_temp_env(fn::Pkg.Operations.var"#118#123"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#131#136"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, Pkg.Types.PackageSpec}, Pkg.Types.PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 [11] (::Pkg.Operations.var"#116#121"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#131#136"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, Pkg.Types.PackageSpec}, Pkg.Types.Context, Pkg.Types.PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 [12] mktempdir(fn::Pkg.Operations.var"#116#121"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#131#136"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, Pkg.Types.PackageSpec}, Pkg.Types.Context, Pkg.Types.PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:819 [13] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:815 [14] mktempdir @ ./file.jl:815 [inlined] [15] #sandbox#115 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] [16] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 [17] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] [18] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [19] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [20] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [21] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [22] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 42.68s: package is missing a package dependency