Package evaluation of FlxQTL on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T12:47:16.403


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.49s


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# Installation
#

Installing FlxQTL...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [ede81e08] + FlxQTL v1.0.0
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [66dad0bd] + AliasTables v1.1.3
  [34da2185] + Compat v4.16.0
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.22
  [8bb1440f] + DelimitedFiles v1.9.1
  [31c24e10] + Distributions v0.25.118
  [ffbed154] + DocStringExtensions v0.9.4
  [1a297f60] + FillArrays v1.13.0
  [ede81e08] + FlxQTL v1.0.0
  [34004b35] + HypergeometricFunctions v0.3.28
  [92d709cd] + IrrationalConstants v0.2.4
  [692b3bcd] + JLLWrappers v1.7.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
⌅ [30fc2ffe] + LossFunctions v0.11.2
  [e1d29d7a] + Missings v1.2.0
  [bac558e1] + OrderedCollections v1.8.0
  [90014a1f] + PDMats v0.11.33
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.8.0
  [a2af1166] + SortingAlgorithms v1.2.1
  [276daf66] + SpecialFunctions v2.5.0
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.0
  [2913bbd2] + StatsBase v0.34.4
  [4c63d2b9] + StatsFuns v1.4.0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [4536629a] + OpenBLAS_jll v0.3.27+1
  [05823500] + OpenLibm_jll v0.8.5+0
  [bea87d4a] + SuiteSparse_jll v7.7.0+0
  [8e850b90] + libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 4.22s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 21.65s


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# Testing
#

     Testing FlxQTL
      Status `/tmp/jl_gWg8vv/Project.toml`
  [8bb1440f] DelimitedFiles v1.9.1
  [31c24e10] Distributions v0.25.118
  [ede81e08] FlxQTL v1.0.0
⌅ [30fc2ffe] LossFunctions v0.11.2
  [90137ffa] StaticArrays v1.9.13
  [10745b16] Statistics v1.11.1
  [2913bbd2] StatsBase v0.34.4
  [8ba89e20] Distributed v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_gWg8vv/Manifest.toml`
  [66dad0bd] AliasTables v1.1.3
  [34da2185] Compat v4.16.0
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [8bb1440f] DelimitedFiles v1.9.1
  [31c24e10] Distributions v0.25.118
  [ffbed154] DocStringExtensions v0.9.4
  [1a297f60] FillArrays v1.13.0
  [ede81e08] FlxQTL v1.0.0
  [34004b35] HypergeometricFunctions v0.3.28
  [92d709cd] IrrationalConstants v0.2.4
  [692b3bcd] JLLWrappers v1.7.0
  [2ab3a3ac] LogExpFunctions v0.3.29
⌅ [30fc2ffe] LossFunctions v0.11.2
  [e1d29d7a] Missings v1.2.0
  [bac558e1] OrderedCollections v1.8.0
  [90014a1f] PDMats v0.11.33
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.8.0
  [a2af1166] SortingAlgorithms v1.2.1
  [276daf66] SpecialFunctions v2.5.0
  [90137ffa] StaticArrays v1.9.13
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [4c63d2b9] StatsFuns v1.4.0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [4536629a] OpenBLAS_jll v0.3.27+1
  [05823500] OpenLibm_jll v0.8.5+0
  [bea87d4a] SuiteSparse_jll v7.7.0+0
  [8e850b90] libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Positive definiteness dropping chromosome 1 is true.
Positive definiteness dropping chromosome 2 is true.
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Kinship dropping chromosome 1 is corrected to be positive definite
Kinship dropping chromosome 2 is corrected to be positive definite
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Kinship dropping chromosome 1 is corrected to be positive definite
Kinship dropping chromosome 2 is corrected to be positive definite
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Test Summary: | Pass  Total      Time
FlxQTL.jl     |  180    180  10m24.7s
     Testing FlxQTL tests passed 

Testing completed after 472.04s

PkgEval succeeded after 678.98s