Package evaluation of FishersExactTest on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T09:35:41.643 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.24s ################################################################################ # Installation # Installing FishersExactTest... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [bb7b2d4f] + FishersExactTest v1.2.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [ffbed154] + DocStringExtensions v0.9.4 [bb7b2d4f] + FishersExactTest v1.2.0 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [21216c6a] + Preferences v1.4.3 [276daf66] + SpecialFunctions v2.5.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [8e850b90] + libblastrampoline_jll v5.11.0+0 Installation completed after 2.16s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 14.11s ################################################################################ # Testing # Testing FishersExactTest Status `/tmp/jl_6yOnUI/Project.toml` [bb7b2d4f] FishersExactTest v1.2.0 [276daf66] SpecialFunctions v2.5.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_6yOnUI/Manifest.toml` [ffbed154] DocStringExtensions v0.9.4 [bb7b2d4f] FishersExactTest v1.2.0 [92d709cd] IrrationalConstants v0.2.4 [692b3bcd] JLLWrappers v1.7.0 [2ab3a3ac] LogExpFunctions v0.3.29 [21216c6a] Preferences v1.4.3 [276daf66] SpecialFunctions v2.5.0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [8e850b90] libblastrampoline_jll v5.11.0+0 Testing Running tests... lbinom: Error During Test at /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:12 Test threw exception Expression: lbinom_cref(n, k) ≈ lbinom(n, k) could not load library "/home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so" /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so: cannot open shared object file: No such file or directory Stacktrace: [1] lbinom_cref(n::Int64, k::Int64) @ Main ~/.julia/packages/FishersExactTest/ZKR9b/test/cref/fet_cref.jl:64 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:676 [inlined] [3] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:12 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [5] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:10 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [7] top-level scope @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:9 hypergeo: Error During Test at /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:18 Test threw exception Expression: hypergeo_cref(n11, n1_, n_1, n) ≈ hypergeo(n11, n1_, n_1, n) could not load library "/home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so" /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so: cannot open shared object file: No such file or directory Stacktrace: [1] hypergeo_cref(n11::Int64, n1_::Int64, n_1::Int64, n::Int64) @ Main ~/.julia/packages/FishersExactTest/ZKR9b/test/cref/fet_cref.jl:71 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:676 [inlined] [3] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:18 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [5] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:16 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [7] top-level scope @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:9 hypergeo: Error During Test at /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:21 Test threw exception Expression: hypergeo_cref(n11, n1_, n_1, n) ≈ hypergeo(n11, n1_, n_1, n) could not load library "/home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so" /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so: cannot open shared object file: No such file or directory Stacktrace: [1] hypergeo_cref(n11::Int64, n1_::Int64, n_1::Int64, n::Int64) @ Main ~/.julia/packages/FishersExactTest/ZKR9b/test/cref/fet_cref.jl:71 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:676 [inlined] [3] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:21 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [5] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:16 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [7] top-level scope @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:9 kt_fisher_exact: Error During Test at /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:41 Test threw exception Expression: (kt_fisher_exact_cref(1656, 32106, 17466, 251573))[4] ≈ 1.825331208626037 * 10 ^ -31 could not load library "/home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so" /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so: cannot open shared object file: No such file or directory Stacktrace: [1] kt_fisher_exact_cref(n11::Int64, n12::Int64, n21::Int64, n22::Int64) @ Main ~/.julia/packages/FishersExactTest/ZKR9b/test/cref/fet_cref.jl:88 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:676 [inlined] [3] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:41 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [5] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:39 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [7] top-level scope @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:9 kt_fisher_exact: Error During Test at /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:42 Test threw exception Expression: (kt_fisher_exact_cref(3, 1, 1, 3))[4] ≈ 0.48571429 could not load library "/home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so" /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/cref/libkfunc.so: cannot open shared object file: No such file or directory Stacktrace: [1] kt_fisher_exact_cref(n11::Int64, n12::Int64, n21::Int64, n22::Int64) @ Main ~/.julia/packages/FishersExactTest/ZKR9b/test/cref/fet_cref.jl:88 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:676 [inlined] [3] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:42 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [5] macro expansion @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:39 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [7] top-level scope @ ~/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:9 Test Summary: | Pass Error Total Time Fisher's Exact Test | 2 5 7 4.8s lbinom | 1 1 3.5s hypergeo | 2 2 0.5s kt_fisher_exact | 2 2 4 0.8s ERROR: LoadError: Some tests did not pass: 2 passed, 0 failed, 5 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/FishersExactTest/ZKR9b/test/runtests.jl:5 Testing failed after 12.95s ERROR: LoadError: Package FishersExactTest errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2124 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 49.52s: package requires a missing binary dependency