Package evaluation of EpithelialDynamics1D on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T18:10:13.875 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.68s ################################################################################ # Installation # Installing EpithelialDynamics1D... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [ace8a2d7] + EpithelialDynamics1D v1.8.3 Updating `~/.julia/environments/v1.11/Manifest.toml` ⌅ [47edcb42] + ADTypes v0.2.7 [7d9f7c33] + Accessors v0.1.42 ⌅ [79e6a3ab] + Adapt v3.7.2 [66dad0bd] + AliasTables v1.1.3 ⌃ [4fba245c] + ArrayInterface v7.7.1 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.6 [d360d2e6] + ChainRulesCore v1.25.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [82cc6244] + DataInterpolations v4.8.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 ⌃ [2b5f629d] + DiffEqBase v6.130.0 ⌅ [459566f4] + DiffEqCallbacks v2.36.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.4 [4e289a0a] + EnumX v1.0.5 [ace8a2d7] + EpithelialDynamics1D v1.8.3 [e2ba6199] + ExprTools v0.1.10 ⌅ [7034ab61] + FastBroadcast v0.2.8 [1a297f60] + FillArrays v1.13.0 [64ca27bc] + FindFirstFunctions v1.4.1 [6a86dc24] + FiniteDiff v2.27.0 ⌃ [cfdabe9e] + FiniteVolumeMethod1D v1.1.3 ⌅ [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.4.12 ⌅ [46192b85] + GPUArraysCore v0.1.5 [615f187c] + IfElse v0.1.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [d3d80556] + LineSearches v7.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [d125e4d3] + ManualMemory v0.1.8 [e1d29d7a] + Missings v1.2.0 [a903a81a] + MovingBoundaryProblems1D v1.0.3 [46d2c3a1] + MuladdMacro v0.2.4 ⌃ [d41bc354] + NLSolversBase v7.8.3 [2774e3e8] + NLsolve v4.5.1 [77ba4419] + NaNMath v1.1.3 [bac558e1] + OrderedCollections v1.8.0 [d96e819e] + Parameters v0.12.3 [f517fe37] + Polyester v0.7.16 [1d0040c9] + PolyesterWeave v0.2.2 ⌃ [d236fae5] + PreallocationTools v0.4.24 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v2.38.10 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.13 [94e857df] + SIMDTypes v0.1.0 ⌅ [0bca4576] + SciMLBase v1.98.1 [c0aeaf25] + SciMLOperators v0.3.13 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 ⌅ [aedffcd0] + Static v0.8.10 [0d7ed370] + StaticArrayInterface v1.8.0 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [7792a7ef] + StrideArraysCore v0.5.7 [892a3eda] + StringManipulation v0.4.1 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [8290d209] + ThreadingUtilities v0.5.2 [410a4b4d] + Tricks v0.1.10 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [700de1a5] + ZygoteRules v0.2.7 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 6.67s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.11/activate_set.jl:63 Precompiling package dependencies... Precompilation completed after 979.94s ################################################################################ # Testing # Testing EpithelialDynamics1D ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1920 Status `/tmp/jl_g3tAeP/Project.toml` [13f3f980] CairoMakie v0.13.2 [38540f10] CommonSolve v0.2.4 ⌅ [82cc6244] DataInterpolations v4.8.0 ⌅ [459566f4] DiffEqCallbacks v2.35.0 [ace8a2d7] EpithelialDynamics1D v1.8.3 ⌃ [cfdabe9e] FiniteVolumeMethod1D v1.1.3 ⌅ [f6369f11] ForwardDiff v0.10.38 ⌅ [7ed4a6bd] LinearSolve v2.16.2 [a903a81a] MovingBoundaryProblems1D v1.0.3 ⌃ [1dea7af3] OrdinaryDiffEq v6.58.2 [324d217c] ReferenceTests v0.10.5 [1bc83da4] SafeTestsets v0.1.0 ⌅ [0bca4576] SciMLBase v1.98.1 [860ef19b] StableRNGs v1.0.2 [2913bbd2] StatsBase v0.34.4 ⌃ [9672c7b4] SteadyStateDiffEq v1.16.1 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays 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[4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [efcefdf7] PCRE2_jll v10.42.0+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling EpithelialDynamics1D... 12529.3 ms ? SciMLBase 6969.9 ms ? MovingBoundaryProblems1D 7060.0 ms ? FiniteVolumeMethod1D 9279.9 ms ? DiffEqBase 9832.4 ms ? DiffEqCallbacks Info Given EpithelialDynamics1D was explicitly requested, output will be shown live  WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 7151.0 ms ? EpithelialDynamics1D WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling SciMLBase... Info Given SciMLBase was explicitly requested, output will be shown live  WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 5415.2 ms ? SciMLBase WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. WARNING: Method definition isconstant(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:254 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:8. Precompiling DiffEqCallbacks... 5310.1 ms ? SciMLBase 2670.1 ms ✓ NLSolversBase 3872.0 ms ? DiffEqBase 8349.4 ms ✓ LineSearches 3487.3 ms ✓ NLsolve Info Given DiffEqCallbacks was explicitly requested, output will be shown live  ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 7146.6 ms ? DiffEqCallbacks 3 dependencies successfully precompiled in 32 seconds. 109 already precompiled. 1 dependency precompiled but a different version is currently loaded. Restart julia to access the new version. Otherwise, loading dependents of this package may trigger further precompilation to work with the unexpected version. 3 dependencies failed but may be precompilable after restarting julia 3 dependencies had output during precompilation: ┌ DiffEqBase │ ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. │ └ @ Base loading.jl:2541 └ ┌ SciMLBase │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DiffEqCallbacks │ [Output was shown above] └ ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling DiffEqBase... 5433.3 ms ? SciMLBase Info Given DiffEqBase was explicitly requested, output will be shown live  ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 4278.5 ms ? DiffEqBase ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling StatsBase... 4215.6 ms ✓ StatsBase 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. Precompiling FiniteVolumeMethod1D... 5306.6 ms ? SciMLBase Info Given FiniteVolumeMethod1D was explicitly requested, output will be shown live  ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 2391.7 ms ? FiniteVolumeMethod1D ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling MovingBoundaryProblems1D... 5245.8 ms ? SciMLBase Info Given MovingBoundaryProblems1D was explicitly requested, output will be shown live  ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 2338.3 ms ? MovingBoundaryProblems1D ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling DataInterpolations... 30403.1 ms ✓ PrettyTables 3426.0 ms ✓ DataInterpolations 2 dependencies successfully precompiled in 35 seconds. 35 already precompiled. Precompiling DataInterpolationsChainRulesCoreExt... 2400.0 ms ✓ DataInterpolations → DataInterpolationsChainRulesCoreExt 1 dependency successfully precompiled in 3 seconds. 43 already precompiled. Test Summary: | Pass Total Time Problem | 13 13 0.6s Precompiling OrdinaryDiffEq... 3221.7 ms ✓ ExponentialUtilities → ExponentialUtilitiesStaticArraysExt 8510.5 ms ✓ Graphs 5499.4 ms ? SciMLBase 48423.6 ms ✓ LoopVectorization 3221.1 ms ✓ MKL 2878.0 ms ✓ VertexSafeGraphs 4302.8 ms ? DiffEqBase 3262.5 ms ✓ LoopVectorization → SpecialFunctionsExt 3618.4 ms ✓ LoopVectorization → ForwardDiffExt 13945.7 ms ✓ TriangularSolve 7368.2 ms ✓ SparseDiffTools 3023.2 ms ? SciMLNLSolve 2813.8 ms ? SimpleNonlinearSolve 48208.4 ms ✓ RecursiveFactorization 4455.8 ms ✓ SparseDiffTools → SparseDiffToolsPolyesterExt 4662.3 ms ? LinearSolve 4974.4 ms ? LinearSolve → LinearSolveRecursiveArrayToolsExt 1644.9 ms ? NonlinearSolve Info Given OrdinaryDiffEq was explicitly requested, output will be shown live  ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 1888.3 ms ? OrdinaryDiffEq 11 dependencies successfully precompiled in 179 seconds. 165 already precompiled. 2 dependencies precompiled but different versions are currently loaded. Restart julia to access the new versions. Otherwise, loading dependents of these packages may trigger further precompilation to work with the unexpected versions. 8 dependencies failed but may be precompilable after restarting julia 8 dependencies had output during precompilation: ┌ OrdinaryDiffEq │ [Output was shown above] └ ┌ SciMLNLSolve │ ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. │ └ @ Base loading.jl:2541 └ ┌ LinearSolve │ ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. │ └ @ Base loading.jl:2541 └ ┌ DiffEqBase │ ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. │ └ @ Base loading.jl:2541 └ ┌ SciMLBase │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ NonlinearSolve │ ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. │ └ @ Base loading.jl:2541 └ ┌ SimpleNonlinearSolve │ ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. │ └ @ Base loading.jl:2541 └ ┌ LinearSolve → LinearSolveRecursiveArrayToolsExt │ ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. │ └ @ Base loading.jl:2541 └ ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling LinearSolve... 5455.8 ms ? SciMLBase Info Given LinearSolve was explicitly requested, output will be shown live  ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 4648.5 ms ? LinearSolve 5131.4 ms ? LinearSolve → LinearSolveRecursiveArrayToolsExt ┌ Warning: Module SciMLBase with build ID ffffffff-ffff-ffff-0026-74075993885a is missing from the cache. │ This may mean SciMLBase [0bca4576-84f4-4d90-8ffe-ffa030f20462] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling LinearSolveRecursiveArrayToolsExt... 5396.5 ms ? SciMLBase 4554.2 ms ? LinearSolve Info Given LinearSolveRecursiveArrayToolsExt was explicitly requested, output will be shown live  ┌ Warning: Module LinearSolve with build ID ffffffff-ffff-ffff-0026-74591622322b is missing from the cache. │ This may mean LinearSolve [7ed4a6bd-45f5-4d41-b270-4a48e9bafcae] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 1752.1 ms ? LinearSolve → LinearSolveRecursiveArrayToolsExt ┌ Warning: Module LinearSolve with build ID ffffffff-ffff-ffff-0026-74591622322b is missing from the cache. │ This may mean LinearSolve [7ed4a6bd-45f5-4d41-b270-4a48e9bafcae] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling SimpleNonlinearSolve... 5360.2 ms ? SciMLBase 4236.4 ms ? DiffEqBase Info Given SimpleNonlinearSolve was explicitly requested, output will be shown live  ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 2760.8 ms ? SimpleNonlinearSolve ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling NonlinearSolve... 5524.6 ms ? SciMLBase 4673.7 ms ? DiffEqBase 4833.7 ms ? LinearSolve 3246.8 ms ? SimpleNonlinearSolve 1993.7 ms ? LinearSolve → LinearSolveRecursiveArrayToolsExt Info Given NonlinearSolve was explicitly requested, output will be shown live  ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 1921.8 ms ? NonlinearSolve ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling SciMLNLSolve... 5517.6 ms ? SciMLBase 4343.9 ms ? DiffEqBase Info Given SciMLNLSolve was explicitly requested, output will be shown live  ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 3164.2 ms ? SciMLNLSolve ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Test Summary: | Pass Total Time Equations | 1447 1447 7m33.5s Test Summary: | Pass Total Time Proliferation | 20 20 13.2s Precompiling SteadyStateDiffEq... 5472.3 ms ? SciMLBase 4400.4 ms ? DiffEqBase 1773.1 ms ? DiffEqCallbacks Info Given SteadyStateDiffEq was explicitly requested, output will be shown live  ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 1967.5 ms ? SteadyStateDiffEq ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Test Summary: | Pass Total Time Uniform | 5 5 46.4s Precompiling CairoMakie... 1930.4 ms ✓ StructArrays 1262.5 ms ✓ Graphics 1042.3 ms ✓ x265_jll 1032.8 ms ✓ x264_jll 21776.8 ms ✓ GeometryBasics 115820.6 ms ✓ TiffImages 4065.2 ms ✓ Interpolations 3405.4 ms ✓ StatsFuns 2116.7 ms ✓ StructArrays → StructArraysAdaptExt 1186.5 ms ✓ StructArrays → StructArraysSparseArraysExt 1499.8 ms ✓ StructArrays → StructArraysStaticArraysExt 2656.4 ms ✓ Cairo 1549.4 ms ✓ FFMPEG_jll 12349.7 ms ✓ GridLayoutBase 2926.0 ms ✓ Packing 3289.9 ms ✓ ShaderAbstractions 8480.8 ms ✓ MakieCore 4605.3 ms ✓ FreeTypeAbstraction 3120.2 ms ✓ Interpolations → InterpolationsUnitfulExt 1612.4 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 4056.1 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 9513.0 ms ✓ Distributions 28018.5 ms ✓ MathTeXEngine 5795.5 ms ✓ Distributions → DistributionsTestExt 4837.4 ms ✓ Distributions → DistributionsChainRulesCoreExt 5967.8 ms ✓ KernelDensity 317373.0 ms ✓ Makie 243342.6 ms ✓ CairoMakie 28 dependencies successfully precompiled in 824 seconds. 243 already precompiled. Precompiling StructArraysExt... 985.5 ms ✓ Accessors → StructArraysExt 1 dependency successfully precompiled in 1 seconds. 19 already precompiled. Precompiling StructArraysGPUArraysCoreExt... 1622.4 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 1 dependency successfully precompiled in 2 seconds. 14 already precompiled. Precompiling DiffEqBaseUnitfulExt... 5641.3 ms ? SciMLBase 5157.4 ms ? DiffEqBase Info Given DiffEqBaseUnitfulExt was explicitly requested, output will be shown live  ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 1905.6 ms ? DiffEqBase → DiffEqBaseUnitfulExt ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 Precompiling DiffEqBaseDistributionsExt... 5463.6 ms ? SciMLBase 4293.2 ms ? DiffEqBase Info Given DiffEqBaseDistributionsExt was explicitly requested, output will be shown live  ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 6701.2 ms ? DiffEqBase → DiffEqBaseDistributionsExt ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 939 running 1 of 1 signal (10): User defined signal 1 access at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__fs_work at /workspace/srcdir/libuv/src/unix/fs.c:1633 uv_fs_access at /workspace/srcdir/libuv/src/unix/fs.c:1720 jl_fs_access at /source/src/jl_uv.c:630 ispath at ./stat.jl:332 resolve_depot at ./loading.jl:3237 parse_cache_header at ./loading.jl:3368 sort_by at ./loading.jl:1171 _broadcast_getindex_evalf at ./broadcast.jl:678 [inlined] _broadcast_getindex at ./broadcast.jl:651 [inlined] getindex at ./broadcast.jl:610 [inlined] macro expansion at ./broadcast.jl:973 [inlined] macro expansion at ./simdloop.jl:77 [inlined] copyto! at ./broadcast.jl:972 [inlined] copyto! at ./broadcast.jl:925 [inlined] copy at ./broadcast.jl:897 [inlined] materialize at ./broadcast.jl:872 [inlined] find_all_in_cache_path at ./loading.jl:1191 #_require_search_from_serialized#1105 at ./loading.jl:1971 _require_search_from_serialized at ./loading.jl:1969 jfptr__require_search_from_serialized_44959.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _require at ./loading.jl:2527 __require_prelocked at ./loading.jl:2388 jfptr___require_prelocked_71284.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_in_world at /source/src/builtins.c:894 #invoke_in_world#3 at ./essentials.jl:1089 [inlined] invoke_in_world at ./essentials.jl:1086 [inlined] _require_prelocked at ./loading.jl:2375 macro expansion at ./loading.jl:2314 [inlined] macro expansion at ./lock.jl:273 [inlined] __require at ./loading.jl:2271 jfptr___require_71215.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_in_world at /source/src/builtins.c:894 #invoke_in_world#3 at ./essentials.jl:1089 [inlined] invoke_in_world at ./essentials.jl:1086 [inlined] require at ./loading.jl:2260 jfptr_require_71212.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] call_require at /source/src/toplevel.c:486 [inlined] eval_import_path at /source/src/toplevel.c:523 jl_toplevel_eval_flex at /source/src/toplevel.c:759 jl_eval_module_expr at /source/src/toplevel.c:215 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:743 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 [inlined] include_package_for_output at ./loading.jl:2881 jfptr_include_package_for_output_72204.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 include_string at ./loading.jl:2744 [inlined] exec_options at ./client.jl:321 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x70e8b02a8249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: Module DiffEqBase with build ID ffffffff-ffff-ffff-0026-7417b637f755 is missing from the cache. │ This may mean DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2541 ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:35 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing) │ @ Base ./loading.jl:2646 │ [3] require_stdlib │ @ ./loading.jl:2644 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:578 │ [6] (::Base.var"#1190#1193"{Base.AsyncCondition})() │ @ Base ./Base.jl:617 └ @ Base Base.jl:588 Precompiling IntervalArithmeticForwardDiffExt... 1245.6 ms ✓ IntervalArithmetic → IntervalArithmeticDiffRulesExt 1681.3 ms ✓ IntervalArithmetic → IntervalArithmeticForwardDiffExt 2 dependencies successfully precompiled in 3 seconds. 43 already precompiled. Precompiling ReferenceTests... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 402 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 [inlined] success at ./process.jl:556 jfptr_success_67859.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #compilecache#1121 at ./loading.jl:3082 compilecache at ./loading.jl:3038 [inlined] #33 at ./precompilation.jl:933 with_logstate at ./logging/logging.jl:522 with_logger at ./logging/logging.jl:632 [inlined] #32 at ./precompilation.jl:927 [inlined] #mkpidlock#7 at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 jfptr_YY.mkpidlockYY.7_76186.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mkpidlock at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:92 #mkpidlock#6 at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] mkpidlock at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 jfptr_mkpidlock_44939.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_apply at /source/src/builtins.c:831 #trymkpidlock#11 at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_apply at /source/src/builtins.c:831 trymkpidlock at /source/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:114 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 precompile_pkgs_maybe_cachefile_lock at ./precompilation.jl:1115 jfptr_precompile_pkgs_maybe_cachefile_lock_72076.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 3758.6 ms ✓ XTermColors macro expansion at ./timing.jl:421 [inlined] #29 at ./precompilation.jl:926 jfptr_YY.29_71971.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x7808e1b6fdd2) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2142 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2082 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x7808e1b5e46d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1837 unknown function (ip: 0x7808e1b52a2a) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x7808e1b5272d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x7808e1b5211d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x7808e1b4e5c6) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7808e2e02249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x00007808d5800010 Total snapshots: 1. Utilization: 0% ╎1 @Base/client.jl:531; _start() ╎ 1 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 1 @Base/Base.jl:557; include(mod::Module, _path::String) ╎ 1 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path::S… ╎ 1 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod::M… ╎ 1 @Base/boot.jl:430; eval ╎ ╎ 1 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 1 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 1 @Pkg/src/API.jl:147; test ╎ ╎ 1 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 1 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ ╎ 1 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec}; i… ╎ ╎ ╎ 1 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io::… ╎ ╎ ╎ 1 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vector… ╎ ╎ ╎ 1 …/src/Operations.jl:2007; test ╎ ╎ ╎ 1 …src/Operations.jl:2063; test(ctx::Pkg.Types.Context, pkgs::… ╎ ╎ ╎ ╎ 1 …src/Operations.jl:1837; kwcall(::@NamedTuple{preferences::… ╎ ╎ ╎ ╎ 1 …src/Operations.jl:1845; #sandbox#115 ╎ ╎ ╎ ╎ 1 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 1 @Base/file.jl:815; mktempdir(fn::Function, parent::Strin… ╎ ╎ ╎ ╎ 1 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#11… ╎ ╎ ╎ ╎ ╎ 1 …c/Operations.jl:1898; (::Pkg.Operations.var"#116#121"… ╎ ╎ ╎ ╎ ╎ 1 …c/Operations.jl:1789; with_temp_env(fn::Pkg.Operatio… ╎ ╎ ╎ ╎ ╎ 1 …/Operations.jl:1931; (::Pkg.Operations.var"#118#123… ╎ ╎ ╎ ╎ ╎ 1 @Base/env.jl:265; withenv(::Pkg.Operations.var"#131… ╎ ╎ ╎ ╎ ╎ 1 …Operations.jl:2082; (::Pkg.Operations.var"#131#13… ╎ ╎ ╎ ╎ ╎ ╎ 1 …Operations.jl:2142; subprocess_handler(cmd::Cmd,… ╎ ╎ ╎ ╎ ╎ ╎ 1 …se/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 1 …se/process.jl:694; wait(x::Base.Process, syncd… ╎ ╎ ╎ ╎ ╎ ╎ 1 …condition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 1 …condition.jl:130; wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 …ase/task.jl:1021; wait() ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 …ase/task.jl:1012; poptask(W::Base.Intrusiv… ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x00007817863e1f50 Total snapshots: 1. Utilization: 0% ╎1 @Base/precompilation.jl:926; (::Base.Precompilation.var"#29#69"{Bool, Bool,… ╎ 1 @Base/timing.jl:421; macro expansion ╎ 1 @Base/precompilation.jl:1115; precompile_pkgs_maybe_cachefile_lock(f::Fun… ╎ 1 …Watching/src/pidfile.jl:114; kwcall(::@NamedTuple{stale_age::Int64}, ::… ╎ 1 …atching/src/pidfile.jl:116; trymkpidlock(::Function, ::Vararg{Any}; kw… ╎ 1 …atching/src/pidfile.jl:90; kwcall(::@NamedTuple{stale_age::Int64, wai… ╎ ╎ 1 …atching/src/pidfile.jl:90; #mkpidlock#6 ╎ ╎ 1 …tching/src/pidfile.jl:92; kwcall(::@NamedTuple{stale_age::Int64, wa… ╎ ╎ 1 …tching/src/pidfile.jl:95; mkpidlock(f::Base.Precompilation.var"#32… ╎ ╎ 1 …se/precompilation.jl:927; #32 ╎ ╎ 1 …e/logging/logging.jl:632; with_logger ╎ ╎ ╎ 1 …/logging/logging.jl:522; with_logstate(f::Base.Precompilation.v… ╎ ╎ ╎ 1 …e/precompilation.jl:933; (::Base.Precompilation.var"#33#73"{Pi… ╎ ╎ ╎ 1 @Base/loading.jl:3038; compilecache ╎ ╎ ╎ 1 @Base/loading.jl:3082; compilecache(pkg::Base.PkgId, path::St… ╎ ╎ ╎ 1 @Base/process.jl:556; success(x::Base.Process) ╎ ╎ ╎ ╎ 1 @Base/process.jl:687; wait ╎ ╎ ╎ ╎ 1 @Base/process.jl:694; wait(x::Base.Process, syncd::Bool) ╎ ╎ ╎ ╎ 1 @Base/condition.jl:125; wait ╎ ╎ ╎ ╎ 1 …ase/condition.jl:130; wait(c::Base.GenericCondition{Bas… ╎ ╎ ╎ ╎ 1 @Base/task.jl:1021; wait() ╎ ╎ ╎ ╎ ╎ 1 @Base/task.jl:1012; poptask(W::Base.IntrusiveLinkedLis… 14760.3 ms ✓ ReferenceTests 2 dependencies successfully precompiled in 19 seconds. 49 already precompiled. [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 [402] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/EpithelialDynamics1D/L1Pzd/test/step_function.jl:19 poptask at ./task.jl:1012 wait at ./task.jl:1021 _ZN4llvm10FoldingSetINS_4SCEVEE10NodeEqualsEPKNS_14FoldingSetBaseEPNS3_4NodeERKNS_16FoldingSetNodeIDEjRS8_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm14FoldingSetBase19FindNodeOrInsertPosERKNS_16FoldingSetNodeIDERPvRKNS0_14FoldingSetInfoE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution21getOrCreateAddRecExprENS_8ArrayRefIPKNS_4SCEVEEEPKNS_4LoopENS2_11NoWrapFlagsE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm15ScalarEvolution10getAddExprERNS_15SmallVectorImplIPKNS_4SCEVEEENS2_11NoWrapFlagsEj at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 _ZN12_GLOBAL__N_111LSRInstance26GenerateReassociationsImplERNS_6LSRUseEjRKNS_7FormulaEjmb at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) profile_printing_listener at ./Base.jl:577 #1190 at ./Base.jl:617 _ZN12_GLOBAL__N_111LSRInstance26GenerateReassociationsImplERNS_6LSRUseEjRKNS_7FormulaEjmb at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) jfptr_YY.1190_76096.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] start_task at /source/src/task.c:1202 unknown function (ip: (nil)) Allocations: 27490639 (Pool: 27489732; Big: 907); GC: 31 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") error at ./error.jl:35 _ZN12_GLOBAL__N_111LSRInstance24GenerateAllReuseFormulaeEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) #schedule#761 at ./task.jl:884 schedule at ./task.jl:876 [inlined] uv_writecb_task at ./stream.jl:1200 _ZN12_GLOBAL__N_111LSRInstanceC1EPN4llvm4LoopERNS1_7IVUsersERNS1_15ScalarEvolutionERNS1_13DominatorTreeERNS1_8LoopInfoERKNS1_19TargetTransformInfoERNS1_15AssumptionCacheERNS1_17TargetLibraryInfoEPNS1_16MemorySSAUpdaterE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) jfptr_uv_writecb_task_67080.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jlcapi_uv_writecb_task_67543.1 at /opt/julia/lib/julia/sys.so (unknown line) _ZL18ReduceLoopStrengthPN4llvm4LoopERNS_7IVUsersERNS_15ScalarEvolutionERNS_13DominatorTreeERNS_8LoopInfoERKNS_19TargetTransformInfoERNS_15AssumptionCacheERNS_17TargetLibraryInfoEPNS_9MemorySSAE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 _ZN12_GLOBAL__N_118LoopStrengthReduce9runOnLoopEPN4llvm4LoopERNS1_13LPPassManagerE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13LPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) wait at ./task.jl:1021 uv_write at ./stream.jl:1081 unsafe_write at ./stream.jl:1154 operator() at /source/src/jitlayers.cpp:1388 _ZN4llvm3orc14IRCompileLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) write at ./strings/io.jl:248 [inlined] print at ./strings/io.jl:250 jfptr_print_48429.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 showerror at ./errorshow.jl:152 unknown function (ip: 0x7808e1b72446) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _ZN4llvm6detail18UniqueFunctionBaseIvJSt10unique_ptrINS_3orc4TaskESt14default_deleteIS4_EEEE8CallImplIPFvS7_EEEvPvRS7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _atexit at ./initdefs.jl:462 jfptr__atexit_69596.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] ijl_atexit_hook at /source/src/init.c:271 jl_exit_thread0_cb at /source/src/signals-unix.c:517 _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) addModule at /source/src/jitlayers.cpp:1875 jl_add_to_ee at /source/src/jitlayers.cpp:2306 jl_add_to_ee at /source/src/jitlayers.cpp:2285 jl_add_to_ee at /source/src/jitlayers.cpp:2285 jl_add_to_ee at /source/src/jitlayers.cpp:2285 _jl_compile_codeinst at /source/src/jitlayers.cpp:277 jl_generate_fptr_impl at /source/src/jitlayers.cpp:536 jl_compile_method_internal at /source/src/gf.c:2536 [inlined] jl_compile_method_internal at /source/src/gf.c:2423 _jl_invoke at /source/src/gf.c:2940 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 #invokelatest#2 at ./essentials.jl:1055 [inlined] invokelatest at ./essentials.jl:1052 [inlined] notify at /home/pkgeval/.julia/packages/Observables/YdEbO/src/Observables.jl:206 [inlined] #Figure#1422 at /home/pkgeval/.julia/packages/Makie/ux0Te/src/figures.jl:122 Figure at /home/pkgeval/.julia/packages/Makie/ux0Te/src/figures.jl:108 unknown function (ip: 0x7817aaf08762) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] jl_f__call_latest at /source/src/builtins.c:875 include at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 unknown function (ip: 0x7817b1993a02) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 PkgEval terminated after 2742.23s: test duration exceeded the time limit