Package evaluation of DynamicalSystemsBase on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T17:47:47.501 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.04s ################################################################################ # Installation # Installing DynamicalSystemsBase... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [6e36e845] + DynamicalSystemsBase v3.14.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [4fba245c] + ArrayInterface v7.18.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.6 [fb6a15b2] + CloseOpenIntervals v0.1.13 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.5.8 [adafc99b] + CpuId v0.3.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [2b5f629d] + DiffEqBase v6.167.2 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.4 [6e36e845] + DynamicalSystemsBase v3.14.0 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.8 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.1.2 [1a297f60] + FillArrays v1.13.0 [f6369f11] + ForwardDiff v1.0.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [615f187c] + IfElse v0.1.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [ae98c720] + Jieko v0.2.1 [10f19ff3] + LayoutPointers v0.1.17 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [d125e4d3] + ManualMemory v0.1.8 [2e0e35c7] + Moshi v0.3.5 [46d2c3a1] + MuladdMacro v0.2.4 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.21 [645ca80c] + Neighborhood v0.2.4 [bac558e1] + OrderedCollections v1.8.0 [bbf590c4] + OrdinaryDiffEqCore v1.22.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.1.0 [d96e819e] + Parameters v0.12.3 [f517fe37] + Polyester v0.7.16 [1d0040c9] + PolyesterWeave v0.2.2 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.31.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [f2b01f46] + Roots v2.2.7 [7e49a35a] + RuntimeGeneratedFunctions v0.5.13 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.82.1 [c0aeaf25] + SciMLOperators v0.3.13 [53ae85a6] + SciMLStructures v1.7.0 [efcf1570] + Setfield v1.1.2 [ce78b400] + SimpleUnPack v1.1.0 [276daf66] + SpecialFunctions v2.5.0 [40b095a5] + StateSpaceSets v2.4.0 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [7792a7ef] + StrideArraysCore v0.5.7 [2efcf032] + SymbolicIndexingInterface v0.3.38 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [8290d209] + ThreadingUtilities v0.5.2 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.2s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.11/activate_set.jl:63 Precompiling package dependencies... Precompilation completed after 453.58s ################################################################################ # Testing # Testing DynamicalSystemsBase ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1920 Status `/tmp/jl_FEHF5Y/Project.toml` [77a26b50] DiffEqNoiseProcess v5.24.1 [6e36e845] DynamicalSystemsBase v3.14.0 [961ee093] ModelingToolkit v9.71.0 [b1df2697] OrdinaryDiffEqTsit5 v1.1.0 [79d7bb75] OrdinaryDiffEqVerner v1.1.1 [10745b16] Statistics v1.11.1 [789caeaf] StochasticDiffEq v6.75.0 [37e2e46d] LinearAlgebra v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_FEHF5Y/Manifest.toml` [47edcb42] ADTypes v1.14.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.18.0 [4c555306] ArrayLayouts v1.11.1 [e2ed5e7c] Bijections v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] BlockArrays v1.5.0 [70df07ce] BracketingNonlinearSolve v1.1.3 [2a0fbf3d] CPUSummary v0.2.6 [00ebfdb7] CSTParser v3.4.3 [d360d2e6] ChainRulesCore v1.25.1 [fb6a15b2] CloseOpenIntervals v0.1.13 [861a8166] Combinatorics v1.0.2 ⌅ [a80b9123] CommonMark v0.8.16 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [b152e2b5] CompositeTypes v0.1.4 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [187b0558] ConstructionBase v1.5.8 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [2b5f629d] DiffEqBase v6.167.2 [459566f4] DiffEqCallbacks v4.4.0 [77a26b50] DiffEqNoiseProcess v5.24.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.6.50 [8d63f2c5] DispatchDoctor v0.4.19 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [5b8099bc] DomainSets v0.7.15 [7c1d4256] DynamicPolynomials v0.6.1 [06fc5a27] DynamicQuantities v1.8.0 [6e36e845] DynamicalSystemsBase v3.14.0 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.8 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.1.2 [1a297f60] FillArrays v1.13.0 [64ca27bc] FindFirstFunctions v1.4.1 [6a86dc24] FiniteDiff v2.27.0 [1fa38f19] Format v1.3.7 ⌅ [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [c27321d9] Glob v1.3.1 [86223c79] Graphs v1.12.1 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [18e54dd8] IntegerMathUtils v0.1.2 [8197267c] IntervalSets v0.7.10 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [ae98c720] Jieko v0.2.1 ⌅ [98e50ef6] JuliaFormatter v1.0.62 [ccbc3e58] JumpProcesses v9.14.2 [ba0b0d4f] Krylov v0.9.10 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.7 [10f19ff3] LayoutPointers v0.1.17 [5078a376] LazyArrays v2.6.1 [2d8b4e74] LevyArea v1.0.0 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.3.0 [7ed4a6bd] LinearSolve v3.7.2 [2ab3a3ac] LogExpFunctions v0.3.29 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.15 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 [961ee093] ModelingToolkit v9.71.0 [2e0e35c7] Moshi v0.3.5 [46d2c3a1] MuladdMacro v0.2.4 [102ac46a] MultivariatePolynomials v0.5.7 [d8a4904e] MutableArithmetics v1.6.4 [d41bc354] NLSolversBase v7.9.1 [2774e3e8] NLsolve v4.5.1 [77ba4419] NaNMath v1.1.3 [b8a86587] NearestNeighbors v0.4.21 [645ca80c] Neighborhood v0.2.4 [8913a72c] NonlinearSolve v4.5.1 [be0214bd] NonlinearSolveBase v1.5.2 [5959db7a] NonlinearSolveFirstOrder v1.3.1 [9a2c21bd] NonlinearSolveQuasiNewton v1.2.1 [26075421] NonlinearSolveSpectralMethods v1.1.1 [6fe1bfb0] OffsetArrays v1.16.0 [429524aa] Optim v1.12.0 [bac558e1] OrderedCollections v1.8.0 [bbf590c4] OrdinaryDiffEqCore v1.22.0 [4302a76b] OrdinaryDiffEqDifferentiation v1.6.0 [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.6.0 [b1df2697] OrdinaryDiffEqTsit5 v1.1.0 [79d7bb75] OrdinaryDiffEqVerner v1.1.1 [90014a1f] PDMats v0.11.33 [65ce6f38] PackageExtensionCompat v1.0.2 [d96e819e] Parameters v0.12.3 [e409e4f3] PoissonRandom v0.4.4 [f517fe37] Polyester v0.7.16 [1d0040c9] PolyesterWeave v0.2.2 [85a6dd25] PositiveFactorizations v0.2.4 [d236fae5] PreallocationTools v0.4.26 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [27ebfcd6] Primes v0.5.7 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.0 [e6cf234a] RandomNumbers v1.6.0 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.31.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [ae5879a3] ResettableStacks v1.1.1 [79098fc4] Rmath v0.8.0 [f2b01f46] Roots v2.2.7 [7e49a35a] RuntimeGeneratedFunctions v0.5.13 [9dfe8606] SCCNonlinearSolve v1.0.0 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.82.1 [19f34311] SciMLJacobianOperators v0.1.2 [c0aeaf25] SciMLOperators v0.3.13 [53ae85a6] SciMLStructures v1.7.0 [efcf1570] Setfield v1.1.2 [727e6d20] SimpleNonlinearSolve v2.2.1 [699a6c99] SimpleTraits v0.9.4 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.1 [47a9eef4] SparseDiffTools v2.24.0 [0a514795] SparseMatrixColorings v0.4.16 [276daf66] SpecialFunctions v2.5.0 [40b095a5] StateSpaceSets v2.4.0 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.4.0 [789caeaf] StochasticDiffEq v6.75.0 [7792a7ef] StrideArraysCore v0.5.7 [2efcf032] SymbolicIndexingInterface v0.3.38 [19f23fe9] SymbolicLimits v0.2.2 [d1185830] SymbolicUtils v3.25.1 [0c5d862f] Symbolics v6.37.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [ed4db957] TaskLocalValues v0.1.2 [8ea1fca8] TermInterface v2.0.0 [1c621080] TestItems v1.0.0 [8290d209] ThreadingUtilities v0.5.2 [a759f4b9] TimerOutputs v0.5.28 [0796e94c] Tokenize v0.5.29 [410a4b4d] Tricks v0.1.10 [781d530d] TruncatedStacktraces v1.4.0 [5c2747f8] URIs v1.5.2 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.22.0 [a7c27f48] Unityper v0.1.6 [19fa3120] VertexSafeGraphs v0.2.0 [897b6980] WeakValueDicts v0.1.0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [856f044c] MKL_jll v2025.0.1+1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling OrdinaryDiffEqVerner... 78929.4 ms ✓ OrdinaryDiffEqVerner 1 dependency successfully precompiled in 80 seconds. 94 already precompiled. WARNING: Method definition test_dynamical_system(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Main.test_dynamical_system), Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition lorenz_rule(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/continuous.jl:9 overwritten at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/stochastic.jl:9. WARNING: Method definition lorenz_rule_iip(Any, Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/continuous.jl:16 overwritten at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/stochastic.jl:18. WARNING: Method definition test_dynamical_system(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Main.test_dynamical_system), Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition henon_rule(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/discrete.jl:6 overwritten at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/arbitrarysteppable.jl:6. WARNING: Method definition henon_rule_iip(Any, Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/discrete.jl:7 overwritten at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/arbitrarysteppable.jl:7. WARNING: Method definition test_dynamical_system(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Main.test_dynamical_system), Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition test_dynamical_system(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Main.test_dynamical_system), Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition test_dynamical_system(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Main.test_dynamical_system), Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition trivial_rule(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/parallel.jl:8 overwritten at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/tangent.jl:8. WARNING: Method definition trivial_rule_iip(Any, Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/parallel.jl:9 overwritten at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/tangent.jl:9. WARNING: Method definition test_dynamical_system(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Main.test_dynamical_system), Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition test_dynamical_system(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Main.test_dynamical_system), Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/test_system_function.jl:6 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition trivial_rule(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/tangent.jl:8 overwritten at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/projected.jl:5. WARNING: Method definition trivial_rule_iip(Any, Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/tangent.jl:9 overwritten at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/projected.jl:6. ┌ Warning: Instability detected. Aborting └ @ SciMLBase ~/.julia/packages/SciMLBase/LGLmH/src/integrator_interface.jl:631 ┌ Warning: Instability detected. Aborting └ @ SciMLBase ~/.julia/packages/SciMLBase/LGLmH/src/integrator_interface.jl:631 ┌ Warning: Instability detected. Aborting └ @ SciMLBase ~/.julia/packages/SciMLBase/LGLmH/src/integrator_interface.jl:631 ┌ Warning: Instability detected. Aborting └ @ SciMLBase ~/.julia/packages/SciMLBase/LGLmH/src/integrator_interface.jl:631 Precompiling ModelingToolkit... 1709.3 ms ✓ DispatchDoctor → DispatchDoctorChainRulesCoreExt 53677.4 ms ✓ JuliaFormatter 3799.6 ms ✓ DynamicPolynomials 3014.3 ms ✓ SciMLBase → SciMLBaseMLStyleExt 2345.3 ms ✓ SCCNonlinearSolve 9810.1 ms ✓ DiffEqCallbacks 43235.7 ms ✓ SymbolicUtils 4984.8 ms ✓ SymbolicLimits 51286.2 ms ✓ Symbolics 11789.4 ms ✓ Symbolics → SymbolicsForwardDiffExt 10047.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceSymbolicsExt 258086.1 ms ✓ ModelingToolkit 38551.9 ms ✓ ModelingToolkit → MTKChainRulesCoreExt 13 dependencies successfully precompiled in 498 seconds. 283 already precompiled. Precompiling SparseDiffToolsSymbolicsExt... 11308.4 ms ✓ SparseDiffTools → SparseDiffToolsSymbolicsExt 1 dependency successfully precompiled in 16 seconds. 171 already precompiled. Precompiling SymbolicsPreallocationToolsExt... 10622.8 ms ✓ Symbolics → SymbolicsPreallocationToolsExt 1 dependency successfully precompiled in 14 seconds. 154 already precompiled. MTK Jacobian: Error During Test at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/jacobian.jl:49 Test threw exception Expression: jac([1.0, 1.0], [], 0.0) == [3 0; 0 -3] BoundsError: attempt to access 0-element Vector{Any} at index [1:2] Stacktrace: [1] throw_boundserror(A::Vector{Any}, I::Tuple{UnitRange{Int64}}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] view @ ./subarray.jl:214 [inlined] [4] macro expansion @ ~/.julia/packages/SymbolicUtils/MGDe2/src/code.jl:411 [inlined] [5] macro expansion @ ~/.julia/packages/Symbolics/tSVcV/src/build_function.jl:366 [inlined] [6] macro expansion @ ~/.julia/packages/RuntimeGeneratedFunctions/M9ZX8/src/RuntimeGeneratedFunctions.jl:163 [inlined] [7] macro expansion @ ./none:0 [inlined] [8] generated_callfunc @ ./none:0 [inlined] [9] RuntimeGeneratedFunction @ ~/.julia/packages/RuntimeGeneratedFunctions/M9ZX8/src/RuntimeGeneratedFunctions.jl:150 [inlined] [10] macro expansion @ ~/.julia/packages/ModelingToolkit/vIsAP/src/systems/codegen_utils.jl:0 [inlined] [11] _generated_call(::GeneratedFunctionWrapper{(2, 3, true), RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:__mtk_arg_1, :___mtkparameters___, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0x534f4758, 0xf66677ff, 0x2b5778c2, 0x2f2e3ef9, 0x7e3ae836), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :__mtk_arg_1, :___mtkparameters___, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0x22f4b03f, 0x0e88912d, 0x38f39e64, 0x8b266025, 0xa7a71601), Nothing}}, ::Vector{Float64}, ::Vector{Any}, ::Float64) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/vIsAP/src/systems/codegen_utils.jl:262 [12] (::GeneratedFunctionWrapper{(2, 3, true), RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:__mtk_arg_1, :___mtkparameters___, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0x534f4758, 0xf66677ff, 0x2b5778c2, 0x2f2e3ef9, 0x7e3ae836), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :__mtk_arg_1, :___mtkparameters___, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0x22f4b03f, 0x0e88912d, 0x38f39e64, 0x8b266025, 0xa7a71601), Nothing}})(::Vector{Float64}, ::Vararg{Any}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/vIsAP/src/systems/codegen_utils.jl:259 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:676 [inlined] [14] macro expansion @ ~/.julia/packages/DynamicalSystemsBase/ggnaG/test/jacobian.jl:49 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [16] top-level scope @ ~/.julia/packages/DynamicalSystemsBase/ggnaG/test/jacobian.jl:32 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 159 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm12TBAAVerifier17visitTBAAMetadataERNS_11InstructionEPKNS_6MDNodeE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_18Verifier16visitInstructionERN4llvm11InstructionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN12_GLOBAL__N_18Verifier6verifyERKN4llvm8FunctionE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm14verifyFunctionERKNS_8FunctionEPNS_11raw_ostreamE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) verifyLLVMIR at /source/src/pipeline.cpp:874 run at /source/src/llvm-propagate-addrspaces.cpp:303 run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 run at /source/usr/include/llvm/IR/PassManager.h:517 [inlined] run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:89 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) run at /source/src/pipeline.cpp:777 operator() at /source/src/jitlayers.cpp:1298 withModuleDo<(anonymous namespace)::OptimizerT::operator()(llvm::orc::ThreadSafeModule, llvm::orc::MaterializationResponsibility&) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1259 [inlined] CallImpl<(anonymous namespace)::OptimizerT<4> > at /source/usr/include/llvm/ADT/FunctionExtras.h:221 _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16IRTransformLayer4emitESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EENS0_16ThreadSafeModuleE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc31BasicIRLayerMaterializationUnit11materializeESt10unique_ptrINS0_29MaterializationResponsibilityESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc19MaterializationTask3runEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm6detail18UniqueFunctionBaseIvJSt10unique_ptrINS_3orc4TaskESt14default_deleteIS4_EEEE8CallImplIPFvS7_EEEvPvRS7_ at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession22dispatchOutstandingMUsEv at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession17OL_completeLookupESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EESt10shared_ptrINS0_23AsynchronousSymbolQueryEESt8functionIFvRKNS_8DenseMapIPNS0_8JITDylibENS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISF_vEEEENSG_ISD_vEENS_6detail12DenseMapPairISD_SI_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc25InProgressFullLookupState8completeESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession19OL_applyQueryPhase1ESt10unique_ptrINS0_21InProgressLookupStateESt14default_deleteIS3_EENS_5ErrorE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupENS0_10LookupKindERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS8_EENS0_15SymbolLookupSetENS0_11SymbolStateENS_15unique_functionIFvNS_8ExpectedINS_8DenseMapINS0_15SymbolStringPtrENS_18JITEvaluatedSymbolENS_12DenseMapInfoISI_vEENS_6detail12DenseMapPairISI_SJ_EEEEEEEEESt8functionIFvRKNSH_IS6_NS_8DenseSetISI_SL_EENSK_IS6_vEENSN_IS6_SV_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) _ZN4llvm3orc16ExecutionSession6lookupERKSt6vectorISt4pairIPNS0_8JITDylibENS0_19JITDylibLookupFlagsEESaIS7_EENS0_15SymbolLookupSetENS0_10LookupKindENS0_11SymbolStateESt8functionIFvRKNS_8DenseMapIS5_NS_8DenseSetINS0_15SymbolStringPtrENS_12DenseMapInfoISI_vEEEENSJ_IS5_vEENS_6detail12DenseMapPairIS5_SL_EEEEEE at /opt/julia/bin/../lib/julia/libLLVM-16jl.so (unknown line) addModule at /source/src/jitlayers.cpp:1875 jl_add_to_ee at /source/src/jitlayers.cpp:2306 _jl_compile_codeinst at /source/src/jitlayers.cpp:277 jl_generate_fptr_impl at /source/src/jitlayers.cpp:536 jl_compile_method_internal at /source/src/gf.c:2536 [inlined] jl_compile_method_internal at /source/src/gf.c:2423 _jl_invoke at /source/src/gf.c:2940 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #CoupledSDEs#2 at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/ext/src/CoupledSDEs.jl:86 CoupledSDEs at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/ext/src/CoupledSDEs.jl:63 [inlined] CoupledSDEs at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/ext/src/CoupledSDEs.jl:63 unknown function (ip: 0x7e38f2afc842) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_body at /source/src/interpreter.c:562 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 [inlined] macro expansion at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/runtests.jl:5 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] testfile at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/runtests.jl:5 testfile at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/runtests.jl:5 unknown function (ip: 0x7e391810a972) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./sysimg.jl:38 unknown function (ip: 0x7e3918100082) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e39193d6249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 unknown function (ip: 0x7297170f4842) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 subprocess_handler at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2142 #131 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2082 withenv at ./env.jl:265 #118 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1931 with_temp_env at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1789 #116 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1898 #mktempdir#28 at ./file.jl:819 unknown function (ip: 0x7297170df3bd) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 mktempdir at ./file.jl:815 mktempdir at ./file.jl:815 [inlined] #sandbox#115 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1845 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1837 unknown function (ip: 0x7297170d3986) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#128 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2063 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] #test#146 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:460 unknown function (ip: 0x7297170d368d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 #test#77 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 unknown function (ip: 0x7297170d307d) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:148 #test#75 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] #test#74 at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] test at /source/usr/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 unknown function (ip: 0x7297170cf526) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:670 eval_body at /source/src/interpreter.c:539 eval_body at /source/src/interpreter.c:539 jl_interpret_toplevel_thunk at /source/src/interpreter.c:824 jl_toplevel_eval_flex at /source/src/toplevel.c:943 jl_toplevel_eval_flex at /source/src/toplevel.c:886 ijl_toplevel_eval_in at /source/src/toplevel.c:994 eval at ./boot.jl:430 [inlined] include_string at ./loading.jl:2734 _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 _include at ./loading.jl:2794 include at ./Base.jl:557 jfptr_include_46977.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 exec_options at ./client.jl:323 _start at ./client.jl:531 jfptr__start_73523.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2948 [inlined] ijl_apply_generic at /source/src/gf.c:3125 jl_apply at /source/src/julia.h:2157 [inlined] true_main at /source/src/jlapi.c:900 jl_repl_entrypoint at /source/src/jlapi.c:1059 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x729718124249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000072970aa00010 Total snapshots: 1. Utilization: 0% ╎1 @Base/client.jl:531; _start() ╎ 1 @Base/client.jl:323; exec_options(opts::Base.JLOptions) ╎ 1 @Base/Base.jl:557; include(mod::Module, _path::String) ╎ 1 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path::S… ╎ 1 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod::M… ╎ 1 @Base/boot.jl:430; eval ╎ ╎ 1 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 1 @Pkg/src/API.jl:146; #test#74 ╎ ╎ 1 @Pkg/src/API.jl:147; test ╎ ╎ 1 @Pkg/src/API.jl:147; #test#75 ╎ ╎ 1 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ ╎ 1 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec}; i… ╎ ╎ ╎ 1 @Pkg/src/API.jl:460; kwcall(::@NamedTuple{julia_args::Cmd, io::… ╎ ╎ ╎ 1 @Pkg/src/API.jl:481; test(ctx::Pkg.Types.Context, pkgs::Vector… ╎ ╎ ╎ 1 …/src/Operations.jl:2007; test ╎ ╎ ╎ 1 …src/Operations.jl:2063; test(ctx::Pkg.Types.Context, pkgs::… ╎ ╎ ╎ ╎ 1 …src/Operations.jl:1837; kwcall(::@NamedTuple{preferences::… ╎ ╎ ╎ ╎ 1 …src/Operations.jl:1845; #sandbox#115 ╎ ╎ ╎ ╎ 1 @Base/file.jl:815; mktempdir ╎ ╎ ╎ ╎ 1 @Base/file.jl:815; mktempdir(fn::Function, parent::Strin… ╎ ╎ ╎ ╎ 1 @Base/file.jl:819; mktempdir(fn::Pkg.Operations.var"#11… ╎ ╎ ╎ ╎ ╎ 1 …c/Operations.jl:1898; (::Pkg.Operations.var"#116#121"… ╎ ╎ ╎ ╎ ╎ 1 …c/Operations.jl:1789; with_temp_env(fn::Pkg.Operatio… ╎ ╎ ╎ ╎ ╎ 1 …/Operations.jl:1931; (::Pkg.Operations.var"#118#123… ╎ ╎ ╎ ╎ ╎ 1 @Base/env.jl:265; withenv(::Pkg.Operations.var"#131… ╎ ╎ ╎ ╎ ╎ 1 …Operations.jl:2082; (::Pkg.Operations.var"#131#13… ╎ ╎ ╎ ╎ ╎ ╎ 1 …Operations.jl:2142; subprocess_handler(cmd::Cmd,… ╎ ╎ ╎ ╎ ╎ ╎ 1 …se/process.jl:687; wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 1 …se/process.jl:694; wait(x::Base.Process, syncd… ╎ ╎ ╎ ╎ ╎ ╎ 1 …condition.jl:125; wait ╎ ╎ ╎ ╎ ╎ ╎ 1 …condition.jl:130; wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 …ase/task.jl:1021; wait() ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 …ase/task.jl:1012; poptask(W::Base.Intrusiv… CoupledSDEs: Error During Test┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 at Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x00007e390be00010 Total snapshots: 1. Utilization: 100% ╎1 @Base/client.jl:531; _start() ╎ 1 @Base/client.jl:296; exec_options(opts::Base.JLOptions) ╎ 1 @Base/boot.jl:430; eval ╎ 1 @Base/sysimg.jl:38; include(fname::String) ╎ 1 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module, _path::… ╎ 1 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity), mod::… ╎ ╎ 1 @Base/boot.jl:430; eval ╎ ╎ 1 …ggnaG/test/runtests.jl:5; testfile(file::String) ╎ ╎ 1 …gnaG/test/runtests.jl:5; testfile(file::String, testname::String) ╎ ╎ 1 @Test/src/Test.jl:1704; macro expansion ╎ ╎ 1 …gnaG/test/runtests.jl:5; macro expansion ╎ ╎ ╎ 1 @Base/sysimg.jl:38; include ╎ ╎ ╎ 1 @Base/loading.jl:2794; _include(mapexpr::Function, mod::Module,… ╎ ╎ ╎ 1 @Base/loading.jl:2734; include_string(mapexpr::typeof(identity… ╎ ╎ ╎ 1 @Base/boot.jl:430; eval ╎ ╎ ╎ 1 …src/CoupledSDEs.jl:63; CoupledSDEs(prob::SDEProblem{Vector{… ╎ ╎ ╎ ╎ 1 …src/CoupledSDEs.jl:63; CoupledSDEs ╎ ╎ ╎ ╎ 1 …rc/CoupledSDEs.jl:86; CoupledSDEs(prob::SDEProblem{Vector… /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/jacobian.jl:64 Test threw exception Expression: jac([1.0, 1.0], [], 0.0) == [3 0; 0 -3] BoundsError: attempt to access 0-element Vector{Any} at index [1:2] Stacktrace: [1] throw_boundserror(A::Vector{Any}, I::Tuple{UnitRange{Int64}}) @ Base ./essentials.jl:14 [2] checkbounds @ ./abstractarray.jl:699 [inlined] [3] view @ ./subarray.jl:214 [inlined] [4] macro expansion @ ~/.julia/packages/SymbolicUtils/MGDe2/src/code.jl:411 [inlined] [5] macro expansion @ ~/.julia/packages/Symbolics/tSVcV/src/build_function.jl:366 [inlined] [6] macro expansion @ ~/.julia/packages/RuntimeGeneratedFunctions/M9ZX8/src/RuntimeGeneratedFunctions.jl:163 [inlined] [7] macro expansion @ ./none:0 [inlined] [8] generated_callfunc @ ./none:0 [inlined] [9] RuntimeGeneratedFunction @ ~/.julia/packages/RuntimeGeneratedFunctions/M9ZX8/src/RuntimeGeneratedFunctions.jl:150 [inlined] [10] macro expansion @ ~/.julia/packages/ModelingToolkit/vIsAP/src/systems/codegen_utils.jl:0 [inlined] [11] _generated_call(::GeneratedFunctionWrapper{(2, 3, true), RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:__mtk_arg_1, :___mtkparameters___, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0x534f4758, 0xf66677ff, 0x2b5778c2, 0x2f2e3ef9, 0x7e3ae836), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :__mtk_arg_1, :___mtkparameters___, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0x22f4b03f, 0x0e88912d, 0x38f39e64, 0x8b266025, 0xa7a71601), Nothing}}, ::Vector{Float64}, ::Vector{Any}, ::Float64) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/vIsAP/src/systems/codegen_utils.jl:262 [12] (::GeneratedFunctionWrapper{(2, 3, true), RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:__mtk_arg_1, :___mtkparameters___, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0x534f4758, 0xf66677ff, 0x2b5778c2, 0x2f2e3ef9, 0x7e3ae836), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :__mtk_arg_1, :___mtkparameters___, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0x22f4b03f, 0x0e88912d, 0x38f39e64, 0x8b266025, 0xa7a71601), Nothing}})(::Vector{Float64}, ::Vararg{Any}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/vIsAP/src/systems/codegen_utils.jl:259 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:676 [inlined] [14] macro expansion @ ~/.julia/packages/DynamicalSystemsBase/ggnaG/test/jacobian.jl:64 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [16] macro expansion @ ~/.julia/packages/DynamicalSystemsBase/ggnaG/test/jacobian.jl:53 [inlined] [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined] [18] top-level scope @ ~/.julia/packages/DynamicalSystemsBase/ggnaG/test/jacobian.jl:32 Test Summary: | Pass Error Total Time DynamicalSystemsBase | 1515 2 1517 36m44.4s Discrete | 76 76 16.4s Continuous | 67 67 1m58.5s Stochastic | 213 213 7m39.6s Stochastic characterisation | 24 24 2m19.4s Arbitrarysteppable | 36 36 5.1s Stroboscopic | 111 111 42.5s Parallel | 182 182 1m43.0s Tangent | 260 260 1m58.8s Poincare | 167 167 45.6s Projected | 304 304 1m23.3s Successful step | 5 5 12.2s Mtk integration | 63 63 15m32.9s Trajectory | 1 1 0.8s Jacobian | 6 2 8 2m06.1s IDT=true, IIP=false | 1 1 0.1s IDT=true, IIP=true | 1 1 4.3s IDT=false, IIP=false | 1 1 1.9s IDT=false, IIP=true | 1 1 3.5s MTK Jacobian | 2 2 4 1m55.3s CoupledSDEs | 1 1 2 55.4s ERROR: LoadError: Some tests did not pass: 1515 passed, 0 failed, 2 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/DynamicalSystemsBase/ggnaG/test/runtests.jl:7 Testing failed after 2222.37s PkgEval terminated after 2728.37s: test duration exceeded the time limit