Package evaluation of DynamicHMCExamples on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T19:22:45.417 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.23s ################################################################################ # Installation # Installing DynamicHMCExamples... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [2771e1c8] + DynamicHMCExamples v0.2.2 Updating `~/.julia/environments/v1.11/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [6e4b80f9] + BenchmarkTools v1.6.0 [d360d2e6] + ChainRulesCore v1.25.1 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.4 [bbc10e6e] + DynamicHMC v3.5.0 [2771e1c8] + DynamicHMCExamples v0.2.2 [1a297f60] + FillArrays v1.13.0 ⌅ [f6369f11] + ForwardDiff v0.10.38 ⌅ [46192b85] + GPUArraysCore v0.1.6 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [1fad7336] + LazyStack v0.1.3 [6fdf6af0] + LogDensityProblems v2.1.2 [996a588d] + LogDensityProblemsAD v1.13.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [be115224] + MCMCDiagnosticTools v0.3.14 [e80e1ace] + MLJModelInterface v1.11.0 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [77ba4419] + NaNMath v1.1.3 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.33 [65ce6f38] + PackageExtensionCompat v1.0.2 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.1 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [30f210dd] + ScientificTypesBase v3.0.0 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [64bff920] + StatisticalTraits v3.4.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.4.0 [5e0ebb24] + Strided v2.3.0 [4db3bf67] + StridedViews v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [02d47bb6] + TensorCast v0.4.8 [84d833dd] + TransformVariables v0.8.16 [f9bc47f6] + TransformedLogDensities v1.1.0 [24ddb15e] + TransmuteDims v0.1.16 [9d95972d] + TupleTools v1.6.0 [3a884ed6] + UnPack v1.0.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9abbd945] + Profile v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.5s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 23.12s ################################################################################ # Testing # Testing DynamicHMCExamples Status `/tmp/jl_7KDVHy/Project.toml` [6e4b80f9] BenchmarkTools v1.6.0 [31c24e10] Distributions v0.25.118 [e30172f5] Documenter v1.10.1 [bbc10e6e] DynamicHMC v3.5.0 [2771e1c8] DynamicHMCExamples v0.2.2 ⌅ [f6369f11] ForwardDiff v0.10.38 [98b081ad] Literate v2.20.1 [6fdf6af0] LogDensityProblems v2.1.2 [996a588d] LogDensityProblemsAD v1.13.0 [2ab3a3ac] LogExpFunctions v0.3.29 [be115224] MCMCDiagnosticTools v0.3.14 [d96e819e] Parameters v0.12.3 [10745b16] Statistics v1.11.1 [4c63d2b9] StatsFuns v1.4.0 [84d833dd] TransformVariables v0.8.16 [f9bc47f6] TransformedLogDensities v1.1.0 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_7KDVHy/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [6e4b80f9] BenchmarkTools v1.6.0 [d360d2e6] ChainRulesCore v1.25.1 [944b1d66] CodecZlib v0.7.8 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [e30172f5] Documenter v1.10.1 [bbc10e6e] DynamicHMC v3.5.0 [2771e1c8] DynamicHMCExamples v0.2.2 [1a297f60] FillArrays v1.13.0 ⌅ [f6369f11] ForwardDiff v0.10.38 ⌅ [46192b85] GPUArraysCore v0.1.6 [d7ba0133] Git v1.3.1 [34004b35] HypergeometricFunctions v0.3.28 [b5f81e59] IOCapture v0.2.5 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [0e77f7df] LazilyInitializedFields v1.3.0 [1fad7336] LazyStack v0.1.3 [98b081ad] Literate v2.20.1 [6fdf6af0] LogDensityProblems v2.1.2 [996a588d] LogDensityProblemsAD v1.13.0 [2ab3a3ac] LogExpFunctions v0.3.29 [be115224] MCMCDiagnosticTools v0.3.14 [e80e1ace] MLJModelInterface v1.11.0 [1914dd2f] MacroTools v0.5.15 [d0879d2d] MarkdownAST v0.1.2 [e1d29d7a] Missings v1.2.0 [77ba4419] NaNMath v1.1.3 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.33 [65ce6f38] PackageExtensionCompat v1.0.2 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.1 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [30f210dd] ScientificTypesBase v3.0.0 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [64bff920] StatisticalTraits v3.4.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.4.0 [5e0ebb24] Strided v2.3.0 [4db3bf67] StridedViews v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [02d47bb6] TensorCast v0.4.8 [3bb67fe8] TranscodingStreams v0.11.3 [84d833dd] TransformVariables v0.8.16 [f9bc47f6] TransformedLogDensities v1.1.0 [24ddb15e] TransmuteDims v0.1.16 [9d95972d] TupleTools v1.6.0 [3a884ed6] UnPack v1.0.2 [2e619515] Expat_jll v2.6.5+0 [f8c6e375] Git_jll v2.49.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [458c3c95] OpenSSL_jll v3.0.16+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [efcefdf7] PCRE2_jll v10.42.0+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling DynamicHMC... 23413.7 ms ✓ TensorCast 16174.9 ms ✓ DynamicHMC 2 dependencies successfully precompiled in 41 seconds. 37 already precompiled. Precompiling TransformedLogDensities... 2454.8 ms ✓ TransformedLogDensities 1 dependency successfully precompiled in 3 seconds. 26 already precompiled. Precompiling Distributions... 9876.5 ms ✓ Distributions 1 dependency successfully precompiled in 14 seconds. 45 already precompiled. Precompiling StatsFunsChainRulesCoreExt... 4192.3 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1 dependency successfully precompiled in 5 seconds. 24 already precompiled. Precompiling DistributionsTestExt... 4703.2 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 7 seconds. 48 already precompiled. Precompiling DistributionsChainRulesCoreExt... 4876.0 ms ✓ Distributions → DistributionsChainRulesCoreExt 1 dependency successfully precompiled in 7 seconds. 51 already precompiled. Precompiling MCMCDiagnosticTools... 5326.3 ms ✓ MCMCDiagnosticTools 1 dependency successfully precompiled in 7 seconds. 54 already precompiled. Test Summary: | Pass Total Time independent bernoulli | 2 2 2m26.1s Precompiling LogDensityProblemsADForwardDiffBenchmarkToolsExt... 3282.1 ms ✓ LogDensityProblemsAD → LogDensityProblemsADForwardDiffBenchmarkToolsExt 1 dependency successfully precompiled in 4 seconds. 35 already precompiled. 4.708 μs (4 allocations: 976 bytes) Test Summary: | Pass Total Time linear regression | 2 2 27.7s 61.340 μs (5 allocations: 7.91 KiB) Test Summary: | Pass Total Time logistic regression | 2 2 19.5s Testing DynamicHMCExamples tests passed Testing completed after 199.46s PkgEval succeeded after 259.58s