Package evaluation of DataToolkit on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T11:24:27.739 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 6.2s ################################################################################ # Installation # Installing DataToolkit... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [dc83c90b] + DataToolkit v0.9.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [18cc8868] + BaseDirs v1.2.4 [34da2185] + Compat v4.16.0 [9a962f9c] + DataAPI v1.16.0 [dc83c90b] + DataToolkit v0.9.0 [e209d0c3] + DataToolkitBase v0.9.1 [9e6fccbf] + DataToolkitCommon v0.9.0 [e2d170a0] + DataValueInterfaces v1.0.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [bac558e1] + OrderedCollections v1.8.0 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [2a0f44e3] + Base64 v1.11.0 [8bf52ea8] + CRC32c v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 1.31s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: DataToolkit Failed to precompile DataToolkit [dc83c90b-d41d-4e55-bdb7-0fc919659999] to "/home/pkgeval/.julia/compiled/v1.11/DataToolkit/jl_FTpjNa". ┌ Error: Error during loading of extension REPLExt of Pkg, use `Base.retry_load_extensions()` to retry. │ exception = │ 1-element ExceptionStack: │ ArgumentError: Package REPLExt [e5eb5ef1-03cf-53a7-ae1d-5a66b08e832b] is required but does not seem to be installed: │ - Run `Pkg.instantiate()` to install all recorded dependencies. │ │ Stacktrace: │ [1] _require(pkg::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2515 │ [2] __require_prelocked(uuidkey::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2388 │ [3] #invoke_in_world#3 │ @ ./essentials.jl:1089 [inlined] │ [4] invoke_in_world │ @ ./essentials.jl:1086 [inlined] │ [5] _require_prelocked │ @ ./loading.jl:2375 [inlined] │ [6] _require_prelocked │ @ ./loading.jl:2374 [inlined] │ [7] run_extension_callbacks(extid::Base.ExtensionId) │ @ Base ./loading.jl:1544 │ [8] run_extension_callbacks(pkgid::Base.PkgId) │ @ Base ./loading.jl:1576 │ [9] run_package_callbacks(modkey::Base.PkgId) │ @ Base ./loading.jl:1396 │ [10] _tryrequire_from_serialized(modkey::Base.PkgId, build_id::UInt128) │ @ Base ./loading.jl:1890 │ [11] _tryrequire_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing) │ @ Base ./loading.jl:1956 │ [12] _require(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2594 │ [13] __require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2388 │ [14] #invoke_in_world#3 │ @ ./essentials.jl:1089 [inlined] │ [15] invoke_in_world │ @ ./essentials.jl:1086 [inlined] │ [16] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2375 │ [17] macro expansion │ @ ./loading.jl:2314 [inlined] │ [18] macro expansion │ @ ./lock.jl:273 [inlined] │ [19] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2271 │ [20] #invoke_in_world#3 │ @ ./essentials.jl:1089 [inlined] │ [21] invoke_in_world │ @ ./essentials.jl:1086 [inlined] │ [22] require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2260 │ [23] include │ @ ./Base.jl:557 [inlined] │ [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:2881 │ [25] top-level scope │ @ stdin:6 │ [26] eval │ @ ./boot.jl:430 [inlined] │ [27] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:2734 │ [28] include_string │ @ ./loading.jl:2744 [inlined] │ [29] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:321 │ [30] _start() │ @ Base ./client.jl:531 └ @ Base loading.jl:1550 ERROR: LoadError: Cannot locate source for REPLExt [e5eb5ef1-03cf-53a7-ae1d-5a66b08e832b] Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] _tryrequire_from_serialized(modkey::Base.PkgId, build_id::UInt128) @ Base ./loading.jl:1881 [3] _tryrequire_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing) @ Base ./loading.jl:1956 [4] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2594 [5] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [6] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [7] invoke_in_world @ ./essentials.jl:1086 [inlined] [8] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [9] macro expansion @ ./loading.jl:2314 [inlined] [10] macro expansion @ ./lock.jl:273 [inlined] [11] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [12] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [13] invoke_in_world @ ./essentials.jl:1086 [inlined] [14] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [15] include @ ./Base.jl:557 [inlined] [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2881 [17] top-level scope @ stdin:6 in expression starting at /home/pkgeval/.julia/packages/DataToolkit/VObGv/src/DataToolkit.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 144.94s ################################################################################ # Testing # Testing DataToolkit Status `/tmp/jl_e74qMy/Project.toml` [dc83c90b] DataToolkit v0.9.0 [e209d0c3] DataToolkitBase v0.9.1 [9e6fccbf] DataToolkitCommon v0.9.0 ⌅ [aea7be01] PrecompileTools v1.2.1 [8dfed614] Test v1.11.0 Status `/tmp/jl_e74qMy/Manifest.toml` [18cc8868] BaseDirs v1.2.4 [34da2185] Compat v4.16.0 [9a962f9c] DataAPI v1.16.0 [dc83c90b] DataToolkit v0.9.0 [e209d0c3] DataToolkitBase v0.9.1 [9e6fccbf] DataToolkitCommon v0.9.0 [e2d170a0] DataValueInterfaces v1.0.0 [82899510] IteratorInterfaceExtensions v1.0.0 [bac558e1] OrderedCollections v1.8.0 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling DataToolkit... 65353.3 ms ✓ DataToolkitCommon Info Given DataToolkit was explicitly requested, output will be shown live  ERROR: LoadError: ArgumentError: Package REPLExt does not have Markdown in its dependencies: - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have REPLExt checked out for development and have  added Markdown as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with REPLExt Stacktrace:  [1] macro expansion  @ ./loading.jl:2299 [inlined]  [2] macro expansion  @ ./lock.jl:273 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2271  [4] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [5] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [6] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2260  [7] include  @ ./Base.jl:557 [inlined]  [8] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:2881  [9] top-level scope  @ stdin:6 in expression starting at /opt/julia/share/julia/stdlib/v1.11/Pkg/ext/REPLExt/REPLExt.jl:1 in expression starting at stdin:6 ┌ Error: Error during loading of extension REPLExt of Pkg, use `Base.retry_load_extensions()` to retry. │ exception = │ 1-element ExceptionStack: │ Failed to precompile REPLExt [e5eb5ef1-03cf-53a7-ae1d-5a66b08e832b] to "/home/pkgeval/.julia/compiled/v1.11/REPLExt/jl_fiIYrK". │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:35 │ [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Vector{Base.PkgId}) │ @ Base ./loading.jl:3174 │ [3] (::Base.var"#1110#1111"{Base.PkgId})() │ @ Base ./loading.jl:2579 │ [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) │ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 │ [5] #mkpidlock#6 │ @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] │ [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) │ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 │ [7] #invokelatest#2 │ @ ./essentials.jl:1057 [inlined] │ [8] invokelatest │ @ ./essentials.jl:1052 [inlined] │ [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) │ @ Base ./loading.jl:3698 │ [10] maybe_cachefile_lock │ @ ./loading.jl:3695 [inlined] │ [11] _require(pkg::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2565 │ [12] __require_prelocked(uuidkey::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2388 │ [13] #invoke_in_world#3 │ @ ./essentials.jl:1089 [inlined] │ [14] invoke_in_world │ @ ./essentials.jl:1086 [inlined] │ [15] _require_prelocked │ @ ./loading.jl:2375 [inlined] │ [16] _require_prelocked │ @ ./loading.jl:2374 [inlined] │ [17] run_extension_callbacks(extid::Base.ExtensionId) │ @ Base ./loading.jl:1544 │ [18] run_extension_callbacks(pkgid::Base.PkgId) │ @ Base ./loading.jl:1576 │ [19] run_package_callbacks(modkey::Base.PkgId) │ @ Base ./loading.jl:1396 │ [20] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) │ @ Base ./loading.jl:2065 │ [21] _require(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2527 │ [22] __require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2388 │ [23] #invoke_in_world#3 │ @ ./essentials.jl:1089 [inlined] │ [24] invoke_in_world │ @ ./essentials.jl:1086 [inlined] │ [25] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2375 │ [26] macro expansion │ @ ./loading.jl:2314 [inlined] │ [27] macro expansion │ @ ./lock.jl:273 [inlined] │ [28] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2271 │ [29] #invoke_in_world#3 │ @ ./essentials.jl:1089 [inlined] │ [30] invoke_in_world │ @ ./essentials.jl:1086 [inlined] │ [31] require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2260 │ [32] include │ @ ./Base.jl:557 [inlined] │ [33] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:2881 │ [34] top-level scope │ @ stdin:6 │ [35] eval │ @ ./boot.jl:430 [inlined] │ [36] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:2734 │ [37] include_string │ @ ./loading.jl:2744 [inlined] │ [38] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:321 │ [39] _start() │ @ Base ./client.jl:531 └ @ Base loading.jl:1550 23335.9 ms ✓ DataToolkit 2 dependencies successfully precompiled in 89 seconds. 23 already precompiled. 1 dependency had output during precompilation: ┌ DataToolkit │ [Output was shown above] └ ERROR: LoadError: ArgumentError: Package REPLExt does not have Markdown in its dependencies: - You may have a partially installed environment. Try `Pkg.instantiate()` to ensure all packages in the environment are installed. - Or, if you have REPLExt checked out for development and have added Markdown as a dependency but haven't updated your primary environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with REPLExt Stacktrace: [1] macro expansion @ ./loading.jl:2299 [inlined] [2] macro expansion @ ./lock.jl:273 [inlined] [3] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [4] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [5] invoke_in_world @ ./essentials.jl:1086 [inlined] [6] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [7] include @ ./Base.jl:557 [inlined] [8] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2881 [9] top-level scope @ stdin:6 in expression starting at /opt/julia/share/julia/stdlib/v1.11/Pkg/ext/REPLExt/REPLExt.jl:1 in expression starting at stdin:6 ┌ Error: Error during loading of extension REPLExt of Pkg, use `Base.retry_load_extensions()` to retry. │ exception = │ 1-element ExceptionStack: │ Failed to precompile REPLExt [e5eb5ef1-03cf-53a7-ae1d-5a66b08e832b] to "/home/pkgeval/.julia/compiled/v1.11/REPLExt/jl_5hCcx4". │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:35 │ [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Vector{Base.PkgId}) │ @ Base ./loading.jl:3174 │ [3] (::Base.var"#1110#1111"{Base.PkgId})() │ @ Base ./loading.jl:2579 │ [4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) │ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 │ [5] #mkpidlock#6 │ @ /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] │ [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) │ @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 │ [7] #invokelatest#2 │ @ ./essentials.jl:1057 [inlined] │ [8] invokelatest │ @ ./essentials.jl:1052 [inlined] │ [9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) │ @ Base ./loading.jl:3698 │ [10] maybe_cachefile_lock │ @ ./loading.jl:3695 [inlined] │ [11] _require(pkg::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2565 │ [12] __require_prelocked(uuidkey::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2388 │ [13] #invoke_in_world#3 │ @ ./essentials.jl:1089 [inlined] │ [14] invoke_in_world │ @ ./essentials.jl:1086 [inlined] │ [15] _require_prelocked │ @ ./loading.jl:2375 [inlined] │ [16] _require_prelocked │ @ ./loading.jl:2374 [inlined] │ [17] run_extension_callbacks(extid::Base.ExtensionId) │ @ Base ./loading.jl:1544 │ [18] run_extension_callbacks(pkgid::Base.PkgId) │ @ Base ./loading.jl:1576 │ [19] run_package_callbacks(modkey::Base.PkgId) │ @ Base ./loading.jl:1396 │ [20] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) │ @ Base ./loading.jl:2065 │ [21] _require(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2527 │ [22] __require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2388 │ [23] #invoke_in_world#3 │ @ ./essentials.jl:1089 [inlined] │ [24] invoke_in_world │ @ ./essentials.jl:1086 [inlined] │ [25] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2375 │ [26] macro expansion │ @ ./loading.jl:2314 [inlined] │ [27] macro expansion │ @ ./lock.jl:273 [inlined] │ [28] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2271 │ [29] #invoke_in_world#3 │ @ ./essentials.jl:1089 [inlined] │ [30] invoke_in_world │ @ ./essentials.jl:1086 [inlined] │ [31] require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2260 │ [32] include(fname::String) │ @ Main ./sysimg.jl:38 │ [33] top-level scope │ @ none:6 │ [34] eval │ @ ./boot.jl:430 [inlined] │ [35] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:296 │ [36] _start() │ @ Base ./client.jl:531 └ @ Base loading.jl:1550 Test Summary: | Total Time DataToolkit.jl | 0 0.4s Testing DataToolkit tests passed Testing completed after 129.32s PkgEval succeeded after 291.41s