Package evaluation of BioSequences on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T07:58:54.779


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.71s


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# Installation
#

Installing BioSequences...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [7e6ae17a] + BioSequences v3.4.1
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [7e6ae17a] + BioSequences v3.4.1
  [3c28c6f8] + BioSymbols v5.1.3
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [7200193e] + Twiddle v1.1.2
  [ade2ca70] + Dates v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [fa267f1f] + TOML v1.0.3
  [4ec0a83e] + Unicode v1.11.0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 1.98s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 14.63s


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# Testing
#

     Testing BioSequences
      Status `/tmp/jl_xLYrel/Project.toml`
  [7e6ae17a] BioSequences v3.4.1
  [3c28c6f8] BioSymbols v5.1.3
  [e30172f5] Documenter v1.10.1
⌅ [aea7be01] PrecompileTools v1.2.1
  [860ef19b] StableRNGs v1.0.2
  [2913bbd2] StatsBase v0.34.4
  [7200193e] Twiddle v1.1.2
  [ddb6d928] YAML v0.4.13
  [37e2e46d] LinearAlgebra v1.11.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_xLYrel/Manifest.toml`
  [a4c015fc] ANSIColoredPrinters v0.0.1
  [1520ce14] AbstractTrees v0.4.5
  [66dad0bd] AliasTables v1.1.3
  [7e6ae17a] BioSequences v3.4.1
  [3c28c6f8] BioSymbols v5.1.3
  [944b1d66] CodecZlib v0.7.8
  [34da2185] Compat v4.16.0
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [ffbed154] DocStringExtensions v0.9.4
  [e30172f5] Documenter v1.10.1
  [d7ba0133] Git v1.3.1
  [b5f81e59] IOCapture v0.2.5
  [92d709cd] IrrationalConstants v0.2.4
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [0e77f7df] LazilyInitializedFields v1.3.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [d0879d2d] MarkdownAST v0.1.2
  [e1d29d7a] Missings v1.2.0
  [bac558e1] OrderedCollections v1.8.0
  [69de0a69] Parsers v2.8.1
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [43287f4e] PtrArrays v1.3.0
  [2792f1a3] RegistryInstances v0.1.0
  [a2af1166] SortingAlgorithms v1.2.1
  [860ef19b] StableRNGs v1.0.2
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [69024149] StringEncodings v0.3.7
  [3bb67fe8] TranscodingStreams v0.11.3
  [7200193e] Twiddle v1.1.2
  [ddb6d928] YAML v0.4.13
  [2e619515] Expat_jll v2.6.5+0
  [f8c6e375] Git_jll v2.49.0+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [458c3c95] OpenSSL_jll v3.0.16+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.11.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.11.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.7.2+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [efcefdf7] PCRE2_jll v10.42.0+1
  [bea87d4a] SuiteSparse_jll v7.7.0+0
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.59.0+0
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Precompiling BioSymbols...
   2630.8 ms  ✓ BioSymbols
  1 dependency successfully precompiled in 3 seconds. 6 already precompiled.
Precompiling BioSequences...
  10233.7 ms  ✓ BioSequences
  1 dependency successfully precompiled in 10 seconds. 8 already precompiled.
Precompiling YAML...
   1078.7 ms  ✓ StringEncodings
   2460.2 ms  ✓ YAML
  2 dependencies successfully precompiled in 4 seconds. 8 already precompiled.
Test Summary: | Pass  Total   Time
Alphabet      |  413    413  21.2s
Test Summary: | Pass  Total   Time
BioSequences  |  226    226  16.7s
Test Summary: | Pass  Total     Time
LongSequences | 2964   2964  1m12.4s
Test Summary: | Pass  Total  Time
Translation   |  579    579  5.7s
Test Summary: | Pass  Total   Time
Counting      | 3723   3723  44.2s
Test Summary: | Pass  Total   Time
Search        |  280    280  41.5s
     Testing BioSequences tests passed 

Testing completed after 235.53s

PkgEval succeeded after 267.56s