Package evaluation of BedgraphFiles on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T09:42:00.017 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.88s ################################################################################ # Installation # Installing BedgraphFiles... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [85eb9095] + BedgraphFiles v2.4.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [0bcc2ff6] + Bedgraph v2.3.0 [85eb9095] + BedgraphFiles v2.4.0 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [e7dc6d0d] + DataValues v0.4.13 [5789e2e9] + FileIO v1.17.0 [1c8ee90f] + IterableTables v1.0.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [682c06a0] + JSON v0.21.4 [e1d29d7a] + Missings v1.2.0 [69de0a69] + Parsers v2.8.1 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [ae029012] + Requires v1.3.1 [5e66a065] + TableShowUtils v0.2.6 [3783bdb8] + TableTraits v1.0.1 [382cd787] + TableTraitsUtils v1.0.2 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [83775a58] + Zlib_jll v1.2.13+1 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 1.64s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 16.9s ################################################################################ # Testing # Testing BedgraphFiles Status `/tmp/jl_IN1aYu/Project.toml` [0bcc2ff6] Bedgraph v2.3.0 [85eb9095] BedgraphFiles v2.4.0 [a93c6f00] DataFrames v1.7.0 [e7dc6d0d] DataValues v0.4.13 [5789e2e9] FileIO v1.17.0 [1c8ee90f] IterableTables v1.0.0 [82899510] IteratorInterfaceExtensions v1.0.0 [1a8c2f83] Query v1.0.0 [5e66a065] TableShowUtils v0.2.6 [3783bdb8] TableTraits v1.0.1 [382cd787] TableTraitsUtils v1.0.2 [56ddb016] Logging v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_IN1aYu/Manifest.toml` [0bcc2ff6] Bedgraph v2.3.0 [85eb9095] BedgraphFiles v2.4.0 [34da2185] Compat v4.16.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [e7dc6d0d] DataValues v0.4.13 [5789e2e9] FileIO v1.17.0 [842dd82b] InlineStrings v1.4.3 [41ab1584] InvertedIndices v1.3.1 [1c8ee90f] IterableTables v1.0.0 [82899510] IteratorInterfaceExtensions v1.0.0 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [1914dd2f] MacroTools v0.5.15 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.0 [69de0a69] Parsers v2.8.1 [2dfb63ee] PooledArrays v1.4.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [1a8c2f83] Query v1.0.0 [2aef5ad7] QueryOperators v0.9.3 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.1 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.1 [5e66a065] TableShowUtils v0.2.6 [3783bdb8] TableTraits v1.0.1 [382cd787] TableTraitsUtils v1.0.2 [bd369af6] Tables v1.12.0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling Query... 2524.4 ms ✓ QueryOperators 2232.4 ms ✓ Query 2 dependencies successfully precompiled in 5 seconds. 29 already precompiled. 9x4 bedGraph file chrom │ first │ last │ value ──────┼──────────┼──────────┼────── chr19 │ 49302000 │ 49302300 │ -1.0 chr19 │ 49302300 │ 49302600 │ -0.75 chr19 │ 49302600 │ 49302900 │ -0.5 chr19 │ 49302900 │ 49303200 │ -0.25 chr19 │ 49303200 │ 49303500 │ 0.0 chr19 │ 49303500 │ 49303800 │ 0.25 chr19 │ 49303800 │ 49304100 │ 0.5 chr19 │ 49304100 │ 49304400 │ 0.75 chr19 │ 49304400 │ 49304700 │ 1.0 Test Summary: | Pass Total Time BedgraphFiles | 42 42 26.1s Testing BedgraphFiles tests passed Testing completed after 35.47s PkgEval succeeded after 67.59s