Package evaluation of Attenuations on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T11:27:31.571


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.04s


################################################################################
# Installation
#

Installing Attenuations...
   Resolving package versions...
    Updating `~/.julia/environments/v1.11/Project.toml`
  [0ff343a0] + Attenuations v0.7.5
    Updating `~/.julia/environments/v1.11/Manifest.toml`
  [0ff343a0] + Attenuations v0.7.5
  [39de3d68] + AxisArrays v0.4.7
  [d1d4a3ce] + BitFlags v0.1.9
  [944b1d66] + CodecZlib v0.7.8
  [f0e56b4a] + ConcurrentUtilities v2.5.0
  [460bff9d] + ExceptionUnwrapping v0.1.11
  [cd3eb016] + HTTP v1.10.15
  [8197267c] + IntervalSets v0.7.10
  [c8e1da08] + IterTools v1.10.0
  [692b3bcd] + JLLWrappers v1.7.0
  [e6f89c97] + LoggingExtras v1.1.0
  [739be429] + MbedTLS v1.1.9
  [4d8831e6] + OpenSSL v1.4.3
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [b3c3ace0] + RangeArrays v0.3.2
  [777ac1f9] + SimpleBufferStream v1.2.0
  [3bb67fe8] + TranscodingStreams v0.11.3
  [5c2747f8] + URIs v1.5.2
  [1986cc42] + Unitful v1.22.0
  [458c3c95] + OpenSSL_jll v3.0.16+0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.2.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [c8ffd9c3] + MbedTLS_jll v2.28.6+0
  [14a3606d] + MozillaCACerts_jll v2023.12.12
  [4536629a] + OpenBLAS_jll v0.3.27+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 2.27s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 19.34s


################################################################################
# Testing
#

     Testing Attenuations
      Status `/tmp/jl_qqX1Uk/Project.toml`
  [0ff343a0] Attenuations v0.7.5
  [39de3d68] AxisArrays v0.4.7
  [cd3eb016] HTTP v1.10.15
  [1986cc42] Unitful v1.22.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_qqX1Uk/Manifest.toml`
  [0ff343a0] Attenuations v0.7.5
  [39de3d68] AxisArrays v0.4.7
  [d1d4a3ce] BitFlags v0.1.9
  [944b1d66] CodecZlib v0.7.8
  [f0e56b4a] ConcurrentUtilities v2.5.0
  [460bff9d] ExceptionUnwrapping v0.1.11
  [cd3eb016] HTTP v1.10.15
  [8197267c] IntervalSets v0.7.10
  [c8e1da08] IterTools v1.10.0
  [692b3bcd] JLLWrappers v1.7.0
  [e6f89c97] LoggingExtras v1.1.0
  [739be429] MbedTLS v1.1.9
  [4d8831e6] OpenSSL v1.4.3
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [b3c3ace0] RangeArrays v0.3.2
  [777ac1f9] SimpleBufferStream v1.2.0
  [3bb67fe8] TranscodingStreams v0.11.3
  [5c2747f8] URIs v1.5.2
  [1986cc42] Unitful v1.22.0
  [458c3c95] OpenSSL_jll v3.0.16+0
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [c8ffd9c3] MbedTLS_jll v2.28.6+0
  [14a3606d] MozillaCACerts_jll v2023.12.12
  [4536629a] OpenBLAS_jll v0.3.27+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Test Summary:      | Pass  Total   Time
Elements - Table 1 |    3      3  34.4s
Test Summary: | Pass  Total  Time
Compounds     |    1      1  0.3s
Test Summary: | Pass  Total  Time
Mixtures      |    1      1  0.7s
Test Summary:       | Pass  Total  Time
Materials - Table 2 |    3      3  1.2s
[ Info: A-150 Tissue-Equivalent Plastic
[ Info: Adipose Tissue (ICRU-44)
[ Info: Air, Dry (near sea level)
[ Info: Alanine
[ Info: B-100 Bone-Equivalent Plastic
[ Info: Bakelite
[ Info: Blood, Whole (ICRU-44)
[ Info: Bone, Cortical (ICRU-44)
[ Info: Brain, Grey/White Matter (ICRU-44)
[ Info: Breast Tissue (ICRU-44)
[ Info: C-552 Air-equivalent Plastic
[ Info: Cadmium Telluride
[ Info: Calcium Fluoride
[ Info: Calcium Sulfate
[ Info: 15 mmol L-1 Ceric Ammonium Sulfate Solution
[ Info: Cesium Iodide
[ Info: Concrete, Ordinary
[ Info: Concrete, Barite (TYPE BA)
[ Info: Eye Lens (ICRU-44)
[ Info: Ferrous Sulfate Standard Fricke
[ Info: Gadolinium Oxysulfide
[ Info: Gafchromic Sensor
[ Info: Gallium Arsenide
[ Info: Glass, Borosilicate (Pyrex)
[ Info: Glass, Lead
[ Info: Lithium Fluride
[ Info: Lithium Tetraborate
[ Info: Lung Tissue (ICRU-44)
[ Info: Magnesium Tetroborate
[ Info: Mercuric Iodide
[ Info: Muscle, Skeletal (ICRU-44)
[ Info: Ovary (ICRU-44)
[ Info: Photographic Emulsion (Kodak Type AA)
[ Info: Photographic Emulsion (Standard Nuclear)
[ Info: Plastic Scintillator, Vinyltoluene
[ Info: Polyethylene
[ Info: Polyethylene Terephthalate, (Mylar)
[ Info: Polymethyl Methacrylate
[ Info: Polystyrene
[ Info: Polytetrafluoroethylene, (Teflon)
[ Info: Polyvinyl Chloride
[ Info: Radiochromic Dye Film, Nylon Base
[ Info: Testis (ICRU-44)
[ Info: Tissue, Soft (ICRU-44)
[ Info: Tissue, Soft (ICRU Four-Component)
[ Info: Tissue-Equivalent Gas, Methane Based
[ Info: Tissue-Equivalent Gas, Propane Based
[ Info: Water, Liquid
[ Info: NCAT Adipose
[ Info: NCAT Air
[ Info: NCAT Aluminum
[ Info: NCAT Bladder
[ Info: NCAT Blood
[ Info: NCAT Brain
[ Info: NCAT Breast Mammary
[ Info: NCAT Cartilage
[ Info: NCAT Dry Rib
[ Info: NCAT Dry Spine
[ Info: NCAT Eye Lens
[ Info: NCAT Graphite
[ Info: NCAT Heart
[ Info: NCAT Intestine
[ Info: NCAT Iodine
[ Info: NCAT Blood with 0.8% Iodine
[ Info: NCAT Iron
[ Info: NCAT Kidney
[ Info: NCAT Lead
[ Info: NCAT Liver
[ Info: NCAT Lung
[ Info: NCAT Lymph
[ Info: NCAT Muscle
[ Info: NCAT Ovary
[ Info: NCAT Pancreas
[ Info: NCAT PMMA
[ Info: NCAT Red Marrow
[ Info: NCAT Skin
[ Info: NCAT Skull
[ Info: NCAT Spleen
[ Info: NCAT Testis
[ Info: NCAT Thyroid
[ Info: NCAT Titanium
[ Info: NCAT Water
[ Info: NCAT Yellow Marrow
[ Info: NCAT Blood with 0.7% Iodine
[ Info: NCAT Blood with 0.9% Iodine
[ Info: NCAT Blood with 1.0% Iodine
[ Info: NCAT Blood with 1.1% Iodine
[ Info: NCAT Blood with 2.0% Iodine
[ Info: NCAT Blood with 3.0% Iodine
[ Info: Omnipaque 350
[ Info: Omnipaque 300
[ Info: I-2 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 1.002 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: I-2.5 mg/mL
[ Info: I-5 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 0.999 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: I-7.5 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 0.996 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: I-10 mg/mL
[ Info: I-15 mg/mL
[ Info: I-20 mg/mL
[ Info: Ca-50 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 0.9400000000000001 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: Ca-100 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 0.9729999999999999 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: Ca-200 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 0.9550000000000001 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: Ca-300 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 0.9570000000000002 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: Ca-400 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 0.971 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: Ca-500 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 0.976 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: Ca-600 mg/mL
Materials - composition sum to one: Test Failed at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:31
  Expression: ≈((m.composition |> values) |> sum, 1, atol = 0.0001)
   Evaluated: 0.978 ≈ 1 (atol=0.0001)

Stacktrace:
 [1] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:679 [inlined]
 [2] macro expansion
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:31 [inlined]
 [3] macro expansion
   @ /opt/julia/share/julia/stdlib/v1.11/Test/src/Test.jl:1704 [inlined]
 [4] top-level scope
   @ ~/.julia/packages/Attenuations/qiqub/test/runtests.jl:29
[ Info: Basis Water
[ Info: Basis Lipid
[ Info: Basis Collagen
[ Info: Basis Hydroxyapatite
[ Info: Basis Air
Test Summary:                      | Pass  Fail  Total  Time
Materials - composition sum to one |  100    10    110  6.2s
ERROR: LoadError: Some tests did not pass: 100 passed, 10 failed, 0 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/Attenuations/qiqub/test/runtests.jl:28

Testing failed after 54.21s

ERROR: LoadError: Package Attenuations errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2124
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:219
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 95.55s: package has test failures