Package evaluation of AtomsIOPython on Julia 1.11.4 (a71dd056e0*) started at 2025-04-08T13:29:54.084 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.69s ################################################################################ # Installation # Installing AtomsIOPython... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [9e4c859b] + AtomsIOPython v0.1.3 Updating `~/.julia/environments/v1.11/Manifest.toml` [3da9722f] + ASEconvert v0.1.8 [a963bdd2] + AtomsBase v0.5.1 [a3e0e189] + AtomsCalculators v0.2.3 [1692102d] + AtomsIO v0.3.0 [9e4c859b] + AtomsIOPython v0.1.3 [46823bd8] + Chemfiles v0.10.42 [34da2185] + Compat v4.16.0 [992eb4ea] + CondaPkg v0.2.27 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [ffbed154] + DocStringExtensions v0.9.4 [352459e4] + ExtXYZ v0.2.2 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [0f8b85d8] + JSON3 v1.14.2 [1914dd2f] + MacroTools v0.5.15 [0b3b1443] + MicroMamba v0.1.14 [bac558e1] + OrderedCollections v1.8.0 [69de0a69] + Parsers v2.8.1 [7b2266bf] + PeriodicTable v1.2.1 [fa939f87] + Pidfile v1.3.0 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [6099a3de] + PythonCall v0.9.24 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6c6a2e73] + Scratch v1.2.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [1986cc42] + Unitful v1.22.0 [a7773ee8] + UnitfulAtomic v1.0.0 [e17b2a0c] + UnsafePointers v1.0.0 [78a364fa] + Chemfiles_jll v0.10.4+0 [6ecdc6fc] + extxyz_jll v0.1.3+0 [cdc7adba] + libcleri_jll v0.12.1+3 [f8abcde7] + micromamba_jll v1.5.8+0 [4d7b5844] + pixi_jll v0.41.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [efcefdf7] + PCRE2_jll v10.42.0+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 2.79s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 77.62s ################################################################################ # Testing # Testing AtomsIOPython Status `/tmp/jl_KF73j1/Project.toml` [3da9722f] ASEconvert v0.1.8 [a963bdd2] AtomsBase v0.5.1 [ed7c10db] AtomsBaseTesting v0.4.0 [1692102d] AtomsIO v0.3.0 [9e4c859b] AtomsIOPython v0.1.3 [189a3867] Reexport v1.2.2 [90137ffa] StaticArrays v1.9.13 [1986cc42] Unitful v1.22.0 [a7773ee8] UnitfulAtomic v1.0.0 [37e2e46d] LinearAlgebra v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_KF73j1/Manifest.toml` [3da9722f] ASEconvert v0.1.8 [a963bdd2] AtomsBase v0.5.1 [ed7c10db] AtomsBaseTesting v0.4.0 [a3e0e189] AtomsCalculators v0.2.3 [1692102d] AtomsIO v0.3.0 [9e4c859b] AtomsIOPython v0.1.3 [46823bd8] Chemfiles v0.10.42 [34da2185] Compat v4.16.0 [992eb4ea] CondaPkg v0.2.27 [9a962f9c] DataAPI v1.16.0 [e2d170a0] DataValueInterfaces v1.0.0 [ffbed154] DocStringExtensions v0.9.4 [352459e4] ExtXYZ v0.2.2 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [0f8b85d8] JSON3 v1.14.2 [1914dd2f] MacroTools v0.5.15 [0b3b1443] MicroMamba v0.1.14 [bac558e1] OrderedCollections v1.8.0 [69de0a69] Parsers v2.8.1 [7b2266bf] PeriodicTable v1.2.1 [fa939f87] Pidfile v1.3.0 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [6099a3de] PythonCall v0.9.24 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [6c6a2e73] Scratch v1.2.1 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [1986cc42] Unitful v1.22.0 [a7773ee8] UnitfulAtomic v1.0.0 [e17b2a0c] UnsafePointers v1.0.0 [78a364fa] Chemfiles_jll v0.10.4+0 [6ecdc6fc] extxyz_jll v0.1.3+0 [cdc7adba] libcleri_jll v0.12.1+3 [f8abcde7] micromamba_jll v1.5.8+0 [4d7b5844] pixi_jll v0.41.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [efcefdf7] PCRE2_jll v10.42.0+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/WMWY0/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/ASEconvert/kvmT8/CondaPkg.toml CondaPkg Resolving changes + ase + libstdcxx-ng + python CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ init │ --format pixi └ /tmp/jl_KF73j1/.CondaPkg ✔ Created /tmp/jl_KF73j1/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_KF73j1/.CondaPkg/pixi.toml │ [dependencies] │ libstdcxx-ng = ">=3.4,<13.0" │ ase = ">=3.23,<3.24" │ │ [dependencies.python] │ channel = "conda-forge" │ build = "*cpython*" │ version = ">=3.8,<4" │ │ [project] │ name = ".CondaPkg" │ platforms = ["linux-64"] │ channels = ["conda-forge"] │ channel-priority = "strict" └ description = "automatically generated by CondaPkg.jl" CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ install └ --manifest-path /tmp/jl_KF73j1/.CondaPkg/pixi.toml ✔ The default environment has been installed. Test Summary: | Pass Total Time AtomsIOPython.jl | 706 706 2m12.5s Testing AtomsIOPython tests passed Testing completed after 139.64s PkgEval succeeded after 244.98s