Package evaluation of AllenNeuropixels on Julia 1.11.4 (a71dd056e0*) started at 2025-04-09T02:59:22.161 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 11.68s ################################################################################ # Installation # Installing AllenNeuropixels... Resolving package versions... Installed libdecor_jll ───────────────────── v0.2.2+0 Installed Calculus ───────────────────────── v0.5.2 Installed JpegTurbo_jll ──────────────────── v3.1.1+0 Installed OffsetArrays ───────────────────── v1.16.0 Installed ImageIO ────────────────────────── v0.6.8 Installed AxisArrays ─────────────────────── v0.4.7 Installed TiffImages ─────────────────────── v0.10.2 Installed Libmount_jll ───────────────────── v2.41.0+0 Installed RegistryInstances ──────────────── v0.1.0 Installed TiledIteration ─────────────────── v0.5.0 Installed ImageSegmentation ──────────────── v1.8.1 Installed JpegTurbo ──────────────────────── v0.1.6 Installed HypergeometricFunctions ────────── v0.3.28 Installed PNGFiles ───────────────────────── v0.4.4 Installed NRRD ───────────────────────────── v0.6.5 Installed LERC_jll ───────────────────────── v4.0.1+0 Installed StatsFuns ──────────────────────── v1.4.0 Installed HistogramThresholding ──────────── v0.3.1 Installed Preferences ────────────────────── v1.4.3 Installed FFTW ───────────────────────────── v1.8.1 Installed Accessors ──────────────────────── v0.1.42 Installed DSP ────────────────────────────── v0.7.10 Installed Dierckx ────────────────────────── v0.5.4 Installed ImageMagick ────────────────────── v1.2.1 Installed Xorg_xkbcomp_jll ───────────────── v1.4.6+1 Installed DimensionalData ────────────────── v0.27.9 Installed LoggingExtras ──────────────────── v1.1.0 Installed Sixel ──────────────────────────── v0.1.3 Installed Unitful ────────────────────────── v1.22.0 Installed RegionTrees ────────────────────── v0.3.2 Installed PDMats ─────────────────────────── v0.11.33 Installed InlineStrings ──────────────────── v1.4.3 Installed Pidfile ────────────────────────── v1.3.0 Installed EarCut_jll ─────────────────────── v2.2.4+0 Installed Git_jll ────────────────────────── v2.49.0+0 Installed ConcurrentUtilities ────────────── v2.5.0 Installed ProgressMeter ──────────────────── v1.10.4 Installed PyFOOOF ────────────────────────── v0.2.0 Installed StaticArrays ───────────────────── v1.9.13 Installed OpenEXR ────────────────────────── v0.3.3 Installed Images ─────────────────────────── v0.26.1 Installed NearestNeighbors ───────────────── v0.4.21 Installed TimeseriesSurrogates ───────────── v2.7.2 Installed Roots ──────────────────────────── v2.2.7 Installed OpenSSL ────────────────────────── v1.4.3 Installed DelayEmbeddings ────────────────── v2.8.0 Installed Xorg_libpthread_stubs_jll ──────── v0.1.2+0 Installed CEnum ──────────────────────────── v0.5.0 Installed FileIO ─────────────────────────── v1.17.0 Installed DelimitedFiles ─────────────────── v1.9.1 Installed InvertedIndices ────────────────── v1.3.1 Installed Cairo_jll ──────────────────────── v1.18.4+0 Installed HTTP ───────────────────────────── v1.10.15 Installed Fontconfig_jll ─────────────────── v2.16.0+0 Installed Statistics ─────────────────────── v1.11.1 Installed Libgpg_error_jll ───────────────── v1.51.1+0 Installed IntelOpenMP_jll ────────────────── v2025.0.4+0 Installed AllenNeuropixels ───────────────── v0.2.0 Installed Polynomials ────────────────────── v4.0.19 Installed MetaGraphs ─────────────────────── v0.7.2 Installed Xorg_libxkbfile_jll ────────────── v1.1.2+1 Installed Xorg_libXinerama_jll ───────────── v1.1.5+0 Installed UnsafePointers ─────────────────── v1.0.0 Installed Netpbm ─────────────────────────── v1.1.1 Installed Static ─────────────────────────── v1.2.0 Installed Xorg_libXau_jll ────────────────── v1.0.12+0 Installed DataFrames ─────────────────────── v1.7.0 Installed SLEEFPirates ───────────────────── v0.6.43 Installed EpollShim_jll ──────────────────── v0.0.20230411+1 Installed Distances ──────────────────────── v0.10.12 Installed Missings ───────────────────────── v1.2.0 Installed FiniteDiff ─────────────────────── v2.27.0 Installed RealDot ────────────────────────── v0.1.0 Installed CondaPkg ───────────────────────── v0.2.27 Installed Normalization ──────────────────── v0.7.3 Installed SIMDTypes ──────────────────────── v0.1.0 Installed JLD2 ───────────────────────────── v0.4.54 Installed IrrationalConstants ────────────── v0.2.4 Installed SIMD ───────────────────────────── v3.7.1 Installed ArnoldiMethod ──────────────────── v0.4.0 Installed JSON ───────────────────────────── v0.21.4 Installed Pango_jll ──────────────────────── v1.56.1+0 Installed CpuId ──────────────────────────── v0.3.1 Installed PtrArrays ──────────────────────── v1.3.0 Installed Clustering ─────────────────────── v0.15.8 Installed ADTypes ────────────────────────── v1.14.0 Installed SpecialFunctions ───────────────── v2.5.0 Installed xkbcommon_jll ──────────────────── v1.4.1+2 Installed PythonCall ─────────────────────── v0.9.24 Installed Bzip2_jll ──────────────────────── v1.0.9+0 Installed QOI ────────────────────────────── v1.0.1 Installed ProgressLogging ────────────────── v0.1.4 Installed SentinelArrays ─────────────────── v1.4.8 Installed SimpleBufferStream ─────────────── v1.2.0 Installed XZ_jll ─────────────────────────── v5.8.1+0 Installed HarfBuzz_jll ───────────────────── v8.5.0+0 Installed IfElse ─────────────────────────── v0.1.1 Installed PkgVersion ─────────────────────── v0.3.3 Installed StaticArraysCore ───────────────── v1.4.3 Installed LZO_jll ────────────────────────── v2.10.3+0 Installed NaNMath ────────────────────────── v1.1.3 Installed WorkerUtilities ────────────────── v1.6.1 Installed ThreadingUtilities ─────────────── v0.5.2 Installed micromamba_jll ─────────────────── v1.5.8+0 Installed NWBStream ──────────────────────── v0.1.0 Installed AllenSDK ───────────────────────── v0.2.0 Installed StateSpaceSets ─────────────────── v2.4.0 Installed TranscodingStreams ─────────────── v0.11.3 Installed FriBidi_jll ────────────────────── v1.0.17+0 Installed ManualMemory ───────────────────── v0.1.8 Installed HypothesisTests ────────────────── v0.11.5 Installed NLSolversBase ──────────────────── v7.9.1 Installed CustomUnitRanges ───────────────── v1.0.2 Installed Graphics ───────────────────────── v1.1.3 Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed ImageMetadata ──────────────────── v0.9.9 Installed MbedTLS ────────────────────────── v1.1.9 Installed Graphs ─────────────────────────── v1.12.1 Installed GLFW_jll ───────────────────────── v3.4.0+2 Installed Ratios ─────────────────────────── v0.4.5 Installed WeakRefStrings ─────────────────── v1.4.2 Installed CommonSubexpressions ───────────── v0.3.1 Installed DataStructures ─────────────────── v0.18.22 Installed Colors ─────────────────────────── v0.12.11 Installed ComputationalResources ─────────── v0.3.2 Installed Meshing ────────────────────────── v0.7.0 Installed CatIndices ─────────────────────── v0.2.2 Installed FreeType2_jll ──────────────────── v2.13.4+0 Installed MappedArrays ───────────────────── v0.4.2 Installed ImageMagick_jll ────────────────── v6.9.13+0 Installed PaddedViews ────────────────────── v0.5.12 Installed ExprTools ──────────────────────── v0.1.10 Installed StatsAPI ───────────────────────── v1.7.0 Installed CommonWorldInvalidations ───────── v1.0.0 Installed Compat ─────────────────────────── v4.16.0 Installed ColorSchemes ───────────────────── v3.26.0 Installed LsqFit ─────────────────────────── v0.15.1 Installed CodecZlib ──────────────────────── v0.7.8 Installed StaticArrayInterface ───────────── v1.8.0 Installed LazyModules ────────────────────── v0.3.1 Installed HDF5_jll ───────────────────────── v1.10.5+7 Installed ImageTransformations ───────────── v0.10.1 Installed StatsBase ──────────────────────── v0.34.4 Installed libpng_jll ─────────────────────── v1.6.47+0 Installed Xorg_libxcb_jll ────────────────── v1.17.0+3 Installed MosaicViews ────────────────────── v0.3.4 Installed StructTypes ────────────────────── v1.11.0 Installed ExceptionUnwrapping ────────────── v0.1.11 Installed ANSIColoredPrinters ────────────── v0.0.1 Installed ImageContrastAdjustment ────────── v0.3.12 Installed Dbus_jll ───────────────────────── v1.16.2+0 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed ImageCorners ───────────────────── v0.1.3 Installed Scratch ────────────────────────── v1.2.1 Installed ColorTypes ─────────────────────── v0.11.5 Installed ImageCore ──────────────────────── v0.9.4 Installed oneTBB_jll ─────────────────────── v2022.0.0+0 Installed DiffRules ──────────────────────── v1.15.1 Installed Xorg_libXext_jll ───────────────── v1.3.6+3 Installed LayoutPointers ─────────────────── v0.1.17 Installed Zstd_jll ───────────────────────── v1.5.7+1 Installed PrettyTables ───────────────────── v2.4.0 Installed Expat_jll ──────────────────────── v2.6.5+0 Installed TensorCore ─────────────────────── v0.1.1 Installed TableTraits ────────────────────── v1.0.1 Installed JSON3 ──────────────────────────── v1.14.2 Installed DiffResults ────────────────────── v1.1.0 Installed Inflate ────────────────────────── v0.1.5 Installed ImageQualityIndexes ────────────── v0.3.7 Installed Parsers ────────────────────────── v2.8.1 Installed ImageShow ──────────────────────── v0.3.8 Installed Imath_jll ──────────────────────── v3.1.11+0 Installed IntegralArrays ─────────────────── v0.1.6 Installed Setfield ───────────────────────── v1.1.2 Installed Extents ────────────────────────── v0.1.5 Installed TimeZones ──────────────────────── v1.21.3 Installed PooledArrays ───────────────────── v1.4.3 Installed MKL_jll ────────────────────────── v2025.0.1+1 Installed LoopVectorization ──────────────── v0.12.172 Installed Libtiff_jll ────────────────────── v4.7.1+0 Installed Dierckx_jll ────────────────────── v0.2.0+0 Installed AbstractFFTs ───────────────────── v1.5.0 Installed JLLWrappers ────────────────────── v1.7.0 Installed DataValueInterfaces ────────────── v1.0.0 Installed Libffi_jll ─────────────────────── v3.2.2+2 Installed ColorVectorSpace ───────────────── v0.9.10 Installed ConstructionBase ───────────────── v1.5.8 Installed Measurements ───────────────────── v2.12.0 Installed OrderedCollections ─────────────── v1.8.0 Installed AbstractTrees ──────────────────── v0.4.5 Installed Xorg_libXrender_jll ────────────── v0.9.11+1 Installed CoordinateTransformations ──────── v0.6.4 Installed ChainRulesCore ─────────────────── v1.25.1 Installed Combinatorics ──────────────────── v1.0.2 Installed Xorg_libXi_jll ─────────────────── v1.8.2+0 Installed ImageFiltering ─────────────────── v0.7.6 Installed HDF5 ───────────────────────────── v0.16.10 Installed TimeseriesTools ────────────────── v0.5.4 Installed PolyesterWeave ─────────────────── v0.2.2 Installed LazilyInitializedFields ────────── v1.3.0 Installed MeshIO ─────────────────────────── v0.4.13 Installed Interpolations ─────────────────── v0.15.1 Installed XSLT_jll ───────────────────────── v1.1.43+0 Installed Ghostscript_jll ────────────────── v9.55.0+4 Installed Reexport ───────────────────────── v1.2.2 Installed ArrayInterface ─────────────────── v7.18.0 Installed LogExpFunctions ────────────────── v0.3.29 Installed Quaternions ────────────────────── v0.7.6 Installed AliasTables ────────────────────── v1.1.3 Installed LittleCMS_jll ──────────────────── v2.16.0+0 Installed StackViews ─────────────────────── v0.1.1 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed MacroTools ─────────────────────── v0.5.15 Installed Rotations ──────────────────────── v1.7.1 Installed FFTW_jll ───────────────────────── v3.3.11+0 Installed RangeArrays ────────────────────── v0.3.2 Installed AllenNeuropixelsBase ───────────── v0.3.1 Installed CompositionsBase ───────────────── v0.1.2 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed Xorg_libXcursor_jll ────────────── v1.2.3+0 Installed UnPack ─────────────────────────── v1.0.2 Installed GeoFormatTypes ─────────────────── v0.4.4 Installed InverseFunctions ───────────────── v0.1.17 Installed CommonSolve ────────────────────── v0.2.4 Installed Interfaces ─────────────────────── v0.3.2 Installed Libuuid_jll ────────────────────── v2.41.0+0 Installed Git ────────────────────────────── v1.3.1 Installed SimpleTraits ───────────────────── v0.9.4 Installed MultivariateStats ──────────────── v0.10.3 Installed DocStringExtensions ────────────── v0.9.4 Installed OpenEXR_jll ────────────────────── v3.2.4+0 Installed Wayland_protocols_jll ──────────── v1.36.0+0 Installed pixi_jll ───────────────────────── v0.41.3+0 Installed Crayons ────────────────────────── v4.1.1 Installed DifferentiationInterface ───────── v0.6.50 Installed MicroMamba ─────────────────────── v0.1.14 Installed Adapt ──────────────────────────── v4.3.0 Installed ContinuousWavelets ─────────────── v1.1.5 Installed Graphite2_jll ──────────────────── v1.3.15+0 Installed Pixman_jll ─────────────────────── v0.44.2+0 Installed XML2_jll ───────────────────────── v2.13.6+1 Installed Rmath ──────────────────────────── v0.8.0 Installed LombScargle ────────────────────── v1.0.3 Installed ImageBase ──────────────────────── v0.1.5 Installed VectorizationBase ──────────────── v0.21.71 Installed IntervalSets ───────────────────── v0.7.10 Installed ImageBinarization ──────────────── v0.3.1 Installed MarkdownAST ────────────────────── v0.1.2 Installed Gettext_jll ────────────────────── v0.21.0+0 Installed Wayland_jll ────────────────────── v1.21.0+2 Installed Arpack_jll ─────────────────────── v3.5.1+1 Installed Mocking ────────────────────────── v0.8.1 Installed IterTools ──────────────────────── v1.10.0 Installed Xorg_xtrans_jll ────────────────── v1.6.0+0 Installed OpenJpeg_jll ───────────────────── v2.5.4+0 Installed GLFW ───────────────────────────── v3.4.3 Installed OpenSSL_jll ────────────────────── v3.0.16+0 Installed BitFlags ───────────────────────── v0.1.9 Installed IndirectArrays ─────────────────── v1.0.0 Installed IOCapture ──────────────────────── v0.2.5 Installed GeometryBasics ─────────────────── v0.4.11 Installed Libgcrypt_jll ──────────────────── v1.11.1+0 Installed SimpleWeightedGraphs ───────────── v1.5.0 Installed MakieCore ──────────────────────── v0.8.12 Installed Xorg_xkeyboard_config_jll ──────── v2.39.0+0 Installed CPUSummary ─────────────────────── v0.2.6 Installed Tables ─────────────────────────── v1.12.0 Installed DataAPI ────────────────────────── v1.16.0 Installed Documenter ─────────────────────── v1.10.1 Installed LLVMOpenMP_jll ─────────────────── v18.1.7+0 Installed Xorg_libXrandr_jll ─────────────── v1.5.4+0 Installed FixedPointNumbers ──────────────── v0.8.5 Installed TZJData ────────────────────────── v1.5.0+2025b Installed ImageDistances ─────────────────── v0.2.17 Installed RecipesBase ────────────────────── v1.3.4 Installed Xorg_libXfixes_jll ─────────────── v6.0.0+0 Installed Libiconv_jll ───────────────────── v1.18.0+0 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed URIs ───────────────────────────── v1.5.2 Installed Peaks ──────────────────────────── v0.5.3 Installed PrecompileTools ────────────────── v1.2.1 Installed HostCPUFeatures ────────────────── v0.1.17 Installed StructArrays ───────────────────── v0.6.21 Installed Neighborhood ───────────────────── v0.2.4 Installed LaTeXStrings ───────────────────── v1.4.0 Installed libsixel_jll ───────────────────── v1.10.5+0 Installed Libglvnd_jll ───────────────────── v1.7.0+0 Installed Glib_jll ───────────────────────── v2.82.4+0 Installed Arpack ─────────────────────────── v0.5.4 Installed FilePathsBase ──────────────────── v0.9.24 Installed Wavelets ───────────────────────── v0.10.1 Installed AxisAlgorithms ─────────────────── v1.1.0 Installed ForwardDiff ────────────────────── v1.0.1 Installed ImageAxes ──────────────────────── v0.6.11 Installed QuadGK ─────────────────────────── v2.11.2 Installed FillArrays ─────────────────────── v1.13.0 Installed Requires ───────────────────────── v1.3.1 Installed CSV ────────────────────────────── v0.10.15 Installed Xorg_libX11_jll ────────────────── v1.8.6+3 Installed Xorg_libXdmcp_jll ──────────────── v1.1.5+0 Installed FFTViews ───────────────────────── v0.3.2 Installed Observables ────────────────────── v0.5.5 Installed Parameters ─────────────────────── v0.12.3 Installed WoodburyMatrices ───────────────── v1.0.0 Installed GeoInterface ───────────────────── v1.4.1 Installed StringManipulation ─────────────── v0.4.1 Installed Distributions ──────────────────── v0.25.118 Installed ImageMorphology ────────────────── v0.4.6 Installed SortingAlgorithms ──────────────── v1.2.1 Updating `~/.julia/environments/v1.11/Project.toml` [c7dbd8d7] + AllenNeuropixels v0.2.0 Updating `~/.julia/environments/v1.11/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [a4c015fc] + ANSIColoredPrinters v0.0.1 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [c7dbd8d7] + AllenNeuropixels v0.2.0 [0b0e28cf] + AllenNeuropixelsBase v0.3.1 [9d22b198] + AllenSDK v0.2.0 [ec485272] + ArnoldiMethod v0.4.0 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.18.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 [336ed68f] + CSV v0.10.15 [49dc2e85] + Calculus v0.5.2 [aafaddc9] + CatIndices v0.2.2 [d360d2e6] + ChainRulesCore v1.25.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [aaaa29a8] + Clustering v0.15.8 [944b1d66] + CodecZlib v0.7.8 ⌃ [35d6a980] + ColorSchemes v3.26.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌅ [c3611d14] + ColorVectorSpace v0.9.10 ⌅ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.2 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [ed09eef8] + ComputationalResources v0.3.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [992eb4ea] + CondaPkg v0.2.27 [187b0558] + ConstructionBase v1.5.8 [96eb917e] + ContinuousWavelets v1.1.5 [150eb455] + CoordinateTransformations v0.6.4 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [dc8bdbbb] + CustomUnitRanges v1.0.2 ⌅ [717857b8] + DSP v0.7.10 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [5732040d] + DelayEmbeddings v2.8.0 [8bb1440f] + DelimitedFiles v1.9.1 [39dd38d3] + Dierckx v0.5.4 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.50 ⌅ [0703355e] + DimensionalData v0.27.9 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.4 [e30172f5] + Documenter v1.10.1 [460bff9d] + ExceptionUnwrapping v0.1.11 [e2ba6199] + ExprTools v0.1.10 [411431e0] + Extents v0.1.5 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.8.1 [5789e2e9] + FileIO v1.17.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.0.1 [f7f18e0c] + GLFW v3.4.3 [68eda718] + GeoFormatTypes v0.4.4 [cf35fbd7] + GeoInterface v1.4.1 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [d7ba0133] + Git v1.3.1 [a2bd30eb] + Graphics v1.1.3 [86223c79] + Graphs v1.12.1 ⌅ [f67ccb44] + HDF5 v0.16.10 [cd3eb016] + HTTP v1.10.15 [2c695a8d] + HistogramThresholding v0.3.1 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.28 [09f84164] + HypothesisTests v0.11.5 [b5f81e59] + IOCapture v0.2.5 [615f187c] + IfElse v0.1.1 ⌃ [2803e5a7] + ImageAxes v0.6.11 ⌃ [c817782e] + ImageBase v0.1.5 [cbc4b850] + ImageBinarization v0.3.1 [f332f351] + ImageContrastAdjustment v0.3.12 ⌅ [a09fc81d] + ImageCore v0.9.4 [89d5987c] + ImageCorners v0.1.3 [51556ac3] + ImageDistances v0.2.17 ⌃ [6a3955dd] + ImageFiltering v0.7.6 ⌃ [82e4d734] + ImageIO v0.6.8 ⌃ [6218d12a] + ImageMagick v1.2.1 ⌃ [bc367c6b] + ImageMetadata v0.9.9 [787d08f9] + ImageMorphology v0.4.6 [2996bd0c] + ImageQualityIndexes v0.3.7 ⌃ [80713f31] + ImageSegmentation v1.8.1 [4e3cecfd] + ImageShow v0.3.8 [02fcd773] + ImageTransformations v0.10.1 ⌃ [916415d5] + Images v0.26.1 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.3 [1d092043] + IntegralArrays v0.1.6 [85a1e053] + Interfaces v0.3.2 [a98d9a8b] + Interpolations v0.15.1 [8197267c] + IntervalSets v0.7.10 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.54 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.2 [b835a17e] + JpegTurbo v0.1.6 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [0e77f7df] + LazilyInitializedFields v1.3.0 [8cdb02fc] + LazyModules v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [fc60dff9] + LombScargle v1.0.3 [bdcacae8] + 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SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [efcefdf7] + PCRE2_jll v10.42.0+1 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building HDF5 → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9ffc57b9bb643bf3fce34f3daf9ff506ed2d8b7a/build.log` Installation completed after 51.5s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 3058.3 ms ✓ TestEnv 1 dependency successfully precompiled in 3 seconds. 23 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.11/activate_set.jl:63 Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: AllenNeuropixels Failed to precompile AllenNeuropixels [c7dbd8d7-5c13-4dcb-90e2-bff79a096f56] to "/home/pkgeval/.julia/compiled/v1.11/AllenNeuropixels/jl_8uE6aS". CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyFOOOF/bExoX/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/WMWY0/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/NWBStream/8csZ3/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/AllenSDK/5o86m/CondaPkg.toml CondaPkg Resolving changes + aiohttp + allensdk (pip) + argschema (pip) + fooof + fsspec + h5py + hdmf + libstdcxx-ng + ndx-events (pip) + openssl + pynwb + python + requests + uv + wheel CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ init │ --format pixi └ /tmp/jl_ZxV3mH/.CondaPkg ✔ Created /tmp/jl_ZxV3mH/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_ZxV3mH/.CondaPkg/pixi.toml │ [dependencies] │ openssl = ">=1.1, <1.1.24" │ aiohttp = "*" │ libstdcxx-ng = ">=3.4,<13.0" │ h5py = "*" │ fooof = ">=1.0, <2" │ uv = ">=0.4" │ pynwb = "*" │ fsspec = "*" │ hdmf = ">3.6" │ wheel = "*" │ requests = "*" │ │ [dependencies.python] │ channel = "conda-forge" │ build = "*cpython*" │ version = ">=3.8,<4, >=3.5,<4, >=3.9,<=3.11" │ │ [project] │ name = ".CondaPkg" │ platforms = ["linux-64"] │ channels = ["conda-forge", "anaconda"] │ channel-priority = "strict" │ description = "automatically generated by CondaPkg.jl" │ │ [pypi-dependencies.ndx-events] │ url = "https://github.com/rly/ndx-events/archive/refs/tags/0.2.0.zip" │ │ [pypi-dependencies.allensdk] │ url = "https://github.com/AllenInstitute/AllenSDK/archive/refs/tags/v2.16.2.zip" │ │ [pypi-dependencies.argschema] └ url = "https://github.com/AllenInstitute/argschema/archive/refs/tags/v3.0.1.zip" CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ install └ --manifest-path /tmp/jl_ZxV3mH/.CondaPkg/pixi.toml Error: × failed to solve the pypi requirements of 'default' 'linux-64' ├─▶ failed to resolve pypi dependencies ╰─▶ Because allensdk==2.16.2 depends on scipy<1.11 and scipy==1.15.2, we can conclude that allensdk==2.16.2 cannot be used. And because only allensdk==2.16.2 is available and you require allensdk, we can conclude that your requirements are unsatisfiable. ERROR: LoadError: InitError: failed process: Process(setenv(`/home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi install --manifest-path /tmp/jl_ZxV3mH/.CondaPkg/pixi.toml`,["PYTHON=", "PIXI_CACHE_DIR=/home/pkgeval/.julia/scratchspaces/992eb4ea-22a4-4c89-a5bb-47a3300528ab/pixi_cache", "PATH=/home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin", "DISPLAY=:1", "LD_LIBRARY_PATH=/opt/julia/bin/../lib/julia:/opt/julia/bin/../lib", "OPENBLAS_NUM_THREADS=1", "CI=true", "R_HOME=*", "LANG=C.UTF-8", "JULIA_CPU_THREADS=1", "JULIA_NUM_PRECOMPILE_TASKS=1", "JULIA_LOAD_PATH=/tmp/jl_ZxV3mH/Project.toml:/home/pkgeval/.julia/environments/v1.11/Project.toml:/opt/julia/share/julia/stdlib/v1.11", "PKGEVAL=true", "HOME=/home/pkgeval", "JULIA_PKG_PRECOMPILE_AUTO=0", "JULIA_PKGEVAL=true", "OPENBLAS_MAIN_FREE=1", "JULIA_DEPOT_PATH=/home/pkgeval/.julia:/usr/local/share/julia:", "JULIA_NUM_THREADS=1", "RATTLER_CACHE_DIR=/home/pkgeval/.julia/scratchspaces/992eb4ea-22a4-4c89-a5bb-47a3300528ab/pixi_cache"]), ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:598 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:513 [3] run(::Cmd) @ Base ./process.jl:510 [4] _run(io::IO, cmd::Cmd, args::Any; flags::Any) @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:679 [5] _run(io::IO, cmd::Cmd, args::Any) @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:673 [6] (::CondaPkg.var"#70#79"{Bool, Base.PipeEndpoint, String, Vector{CondaPkg.PipPkgSpec}, Vector{CondaPkg.PkgSpec}, Vector{CondaPkg.ChannelSpec}})() @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:964 [7] cd(f::CondaPkg.var"#70#79"{Bool, Base.PipeEndpoint, String, Vector{CondaPkg.PipPkgSpec}, Vector{CondaPkg.PkgSpec}, Vector{CondaPkg.ChannelSpec}}, dir::String) @ Base.Filesystem ./file.jl:112 [8] resolve(; force::Bool, io::IO, interactive::Bool, dry_run::Bool) @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:904 [9] resolve() @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:682 [10] envdir() @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/env.jl:70 [11] init_context() @ PythonCall.C ~/.julia/packages/PythonCall/WMWY0/src/C/context.jl:63 [12] __init__() @ PythonCall.C ~/.julia/packages/PythonCall/WMWY0/src/C/C.jl:23 [13] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [14] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [15] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [16] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [17] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [18] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [19] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [20] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [21] invoke_in_world @ ./essentials.jl:1086 [inlined] [22] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [23] macro expansion @ ./loading.jl:2314 [inlined] [24] macro expansion @ ./lock.jl:273 [inlined] [25] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [26] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [27] invoke_in_world @ ./essentials.jl:1086 [inlined] [28] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [29] include @ ./Base.jl:557 [inlined] [30] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2881 [31] top-level scope @ stdin:6 during initialization of module C in expression starting at /home/pkgeval/.julia/packages/AllenNeuropixels/NVGC2/src/AllenNeuropixels.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2213.82s ################################################################################ # Testing # Testing AllenNeuropixels ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:1920 Status `/tmp/jl_QqJZWI/Project.toml` [c7dbd8d7] AllenNeuropixels v0.2.0 [35d6a980] ColorSchemes v3.29.0 ⌅ [5ae59095] Colors v0.12.11 [a93c6f00] DataFrames v1.7.0 [5789e2e9] FileIO v1.17.0 [cf35fbd7] GeoInterface v1.4.1 [61d90e0f] GeoJSON v0.8.2 [db073c08] GeoMakie v0.7.11 ⌅ [5c1252a2] GeometryBasics v0.4.11 [4e3cecfd] ImageShow v0.3.8 ⌅ [7269a6da] MeshIO v0.4.13 [85f8d34a] NCDatasets v0.14.7 ⌃ [22d9f318] RPRMakie v0.7.18 ⌃ [27029320] RadeonProRender v0.3.2 [10745b16] Statistics v1.11.1 [44cfe95a] Pkg v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_QqJZWI/Manifest.toml` [47edcb42] ADTypes v1.14.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [c7dbd8d7] AllenNeuropixels v0.2.0 [0b0e28cf] AllenNeuropixelsBase v0.3.1 [9d22b198] AllenSDK v0.2.0 [27a7e980] Animations v0.4.2 [ec485272] ArnoldiMethod v0.4.0 [7d9fca2a] Arpack v0.5.4 [4fba245c] ArrayInterface v7.18.0 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] CEnum v0.5.0 ⌅ [179af706] CFTime v0.1.4 [2a0fbf3d] CPUSummary v0.2.6 [336ed68f] CSV v0.10.15 [49dc2e85] Calculus v0.5.2 [aafaddc9] CatIndices v0.2.2 [d360d2e6] ChainRulesCore v1.25.1 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.1 [35d6a980] ColorSchemes v3.29.0 ⌅ [3da002f7] ColorTypes v0.11.5 ⌃ [c3611d14] ColorVectorSpace v0.10.0 ⌅ [5ae59095] Colors v0.12.11 [861a8166] Combinatorics v1.0.2 [1fbeeb36] CommonDataModel v0.3.8 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [ed09eef8] ComputationalResources v0.3.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [992eb4ea] CondaPkg v0.2.27 [187b0558] ConstructionBase v1.5.8 [96eb917e] ContinuousWavelets v1.1.5 [d38c429a] Contour v0.6.3 [150eb455] CoordinateTransformations v0.6.4 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [dc8bdbbb] CustomUnitRanges v1.0.2 ⌅ [717857b8] DSP v0.7.10 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [927a84f5] DelaunayTriangulation v1.6.4 [5732040d] DelayEmbeddings v2.8.0 [8bb1440f] DelimitedFiles v1.9.1 [39dd38d3] Dierckx v0.5.4 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.6.50 ⌅ [0703355e] DimensionalData v0.27.9 [3c3547ce] DiskArrays v0.4.12 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [e30172f5] Documenter v1.10.1 [4e289a0a] EnumX v1.0.5 [429591f6] ExactPredicates v2.2.8 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [411431e0] Extents v0.1.5 [4f61f5a4] FFTViews v0.3.2 [7a1cc6ca] FFTW v1.8.1 [5789e2e9] FileIO v1.17.0 ⌅ [8fc22ac5] FilePaths v0.8.3 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [f6369f11] ForwardDiff v1.0.1 [b38be410] FreeType v4.1.1 [663a7486] FreeTypeAbstraction v0.10.6 [f7f18e0c] GLFW v3.4.3 [68eda718] GeoFormatTypes v0.4.4 [cf35fbd7] GeoInterface v1.4.1 [0edc0954] GeoInterfaceMakie v0.1.9 [0329782f] GeoInterfaceRecipes v1.0.2 [61d90e0f] GeoJSON v0.8.2 [db073c08] GeoMakie v0.7.11 [0ef565a4] Geodesy v1.1.0 ⌅ [5c1252a2] GeometryBasics v0.4.11 [3251bfac] GeometryOps v0.1.16 [05efe853] GeometryOpsCore v0.1.3 ⌃ [d7ba0133] Git v1.3.0 [a2bd30eb] Graphics v1.1.3 [86223c79] Graphs v1.12.1 [3955a311] GridLayoutBase v0.11.1 [42e2da0e] Grisu v1.0.2 ⌅ [f67ccb44] HDF5 v0.16.10 [cd3eb016] HTTP v1.10.15 [2c695a8d] HistogramThresholding v0.3.1 [3e5b6fbb] HostCPUFeatures v0.1.17 [34004b35] HypergeometricFunctions v0.3.28 [09f84164] HypothesisTests v0.11.5 [b5f81e59] IOCapture v0.2.5 [615f187c] IfElse v0.1.1 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [cbc4b850] ImageBinarization v0.3.1 [f332f351] ImageContrastAdjustment v0.3.12 [a09fc81d] ImageCore v0.10.5 [89d5987c] ImageCorners v0.1.3 [51556ac3] ImageDistances v0.2.17 [6a3955dd] ImageFiltering v0.7.9 [82e4d734] ImageIO v0.6.9 [6218d12a] ImageMagick v1.4.1 [bc367c6b] ImageMetadata v0.9.10 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Xorg_libX11_jll v1.8.6+3 [0c0b7dd1] Xorg_libXau_jll v1.0.12+0 [935fb764] Xorg_libXcursor_jll v1.2.3+0 [a3789734] Xorg_libXdmcp_jll v1.1.5+0 [1082639a] Xorg_libXext_jll v1.3.6+3 [d091e8ba] Xorg_libXfixes_jll v6.0.0+0 [a51aa0fd] Xorg_libXi_jll v1.8.2+0 [d1454406] Xorg_libXinerama_jll v1.1.5+0 [ec84b674] Xorg_libXrandr_jll v1.5.4+0 [ea2f1a96] Xorg_libXrender_jll v0.9.11+1 [14d82f49] Xorg_libpthread_stubs_jll v0.1.2+0 [c7cfdc94] Xorg_libxcb_jll v1.17.0+3 [cc61e674] Xorg_libxkbfile_jll v1.1.2+1 [35661453] Xorg_xkbcomp_jll v1.4.6+1 [33bec58e] Xorg_xkeyboard_config_jll v2.39.0+0 [c5fb5394] Xorg_xtrans_jll v1.6.0+0 [3161d3a3] Zstd_jll v1.5.7+1 [9a68df92] isoband_jll v0.2.3+0 [a4ae2306] libaom_jll v3.11.0+0 [0ac62f75] libass_jll v0.15.2+0 [1183f4f0] libdecor_jll v0.2.2+0 [f638f0a6] libfdk_aac_jll v2.0.3+0 [b53b4c65] libpng_jll v1.6.47+0 [075b6546] libsixel_jll v1.10.5+0 [f27f6e37] libvorbis_jll v1.3.7+2 ⌃ [c5f90fcd] libwebp_jll v1.4.0+0 [f8abcde7] micromamba_jll v1.5.8+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [4d7b5844] pixi_jll v0.41.3+0 ⌅ [1270edf5] x264_jll v2021.5.5+0 ⌅ [dfaa095f] x265_jll v3.5.0+0 [d8fb68d0] xkbcommon_jll v1.4.1+2 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.11.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.7.2+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+0 [14a3606d] MozillaCACerts_jll v2023.12.12 [4536629a] OpenBLAS_jll v0.3.27+1 [05823500] OpenLibm_jll v0.8.5+0 [efcefdf7] PCRE2_jll v10.42.0+1 [bea87d4a] SuiteSparse_jll v7.7.0+0 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.59.0+0 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling AllenNeuropixels... ✗ NWBStream ✗ PyFOOOF ✗ AllenSDK ✗ AllenNeuropixelsBase Info Given AllenNeuropixels was explicitly requested, output will be shown live   CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyFOOOF/bExoX/CondaPkg.toml  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/WMWY0/CondaPkg.toml  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/NWBStream/8csZ3/CondaPkg.toml  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/AllenSDK/5o86m/CondaPkg.toml  CondaPkg Resolving changes  + aiohttp  + allensdk (pip)  + argschema (pip)  + fooof  + fsspec  + h5py  + hdmf  + libstdcxx-ng  + ndx-events (pip)  + openssl  + pynwb  + python  + requests  + uv  + wheel  CondaPkg Initialising pixi  │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi  │ init  │ --format pixi  └ /tmp/jl_QqJZWI/.CondaPkg ✔ Created /tmp/jl_QqJZWI/.CondaPkg/pixi.toml  CondaPkg Wrote /tmp/jl_QqJZWI/.CondaPkg/pixi.toml  │ [dependencies]  │ openssl = ">=1.1, <1.1.24"  │ aiohttp = "*"  │ libstdcxx-ng = ">=3.4,<13.0"  │ h5py = "*"  │ fooof = ">=1.0, <2"  │ uv = ">=0.4"  │ pynwb = "*"  │ fsspec = "*"  │ hdmf = ">3.6"  │ wheel = "*"  │ requests = "*"  │  │ [dependencies.python]  │ channel = "conda-forge"  │ build = "*cpython*"  │ version = ">=3.8,<4, >=3.5,<4, >=3.9,<=3.11"  │  │ [project]  │ name = ".CondaPkg"  │ platforms = ["linux-64"]  │ channels = ["conda-forge", "anaconda"]  │ channel-priority = "strict"  │ description = "automatically generated by CondaPkg.jl"  │  │ [pypi-dependencies.ndx-events]  │ url = "https://github.com/rly/ndx-events/archive/refs/tags/0.2.0.zip"  │  │ [pypi-dependencies.allensdk]  │ url = "https://github.com/AllenInstitute/AllenSDK/archive/refs/tags/v2.16.2.zip"  │  │ [pypi-dependencies.argschema]  └ url = "https://github.com/AllenInstitute/argschema/archive/refs/tags/v3.0.1.zip"  CondaPkg Installing packages  │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi  │ install  └ --manifest-path /tmp/jl_QqJZWI/.CondaPkg/pixi.toml Error:  × failed to solve the pypi requirements of 'default' 'linux-64'  ├─▶ failed to resolve pypi dependencies  ╰─▶ Because allensdk==2.16.2 depends on scipy<1.11 and scipy==1.15.2, we can  conclude that allensdk==2.16.2 cannot be used.  And because only allensdk==2.16.2 is available and you require allensdk,  we can conclude that your requirements are unsatisfiable.  ERROR: LoadError: InitError: failed process: Process(setenv(`/home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi install --manifest-path /tmp/jl_QqJZWI/.CondaPkg/pixi.toml`,["PYTHON=", "PIXI_CACHE_DIR=/home/pkgeval/.julia/scratchspaces/992eb4ea-22a4-4c89-a5bb-47a3300528ab/pixi_cache", "PATH=/home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin", "DISPLAY=:1", "LD_LIBRARY_PATH=/opt/julia/bin/../lib/julia:/opt/julia/bin/../lib", "OPENBLAS_NUM_THREADS=1", "CI=true", "R_HOME=*", "LANG=C.UTF-8", "JULIA_CPU_THREADS=1", "JULIA_NUM_PRECOMPILE_TASKS=1", "JULIA_LOAD_PATH=/tmp/jl_QqJZWI/Project.toml", "PKGEVAL=true", "HOME=/home/pkgeval", "JULIA_PKG_PRECOMPILE_AUTO=0", "JULIA_PKGEVAL=true", "OPENBLAS_MAIN_FREE=1", "JULIA_DEPOT_PATH=/home/pkgeval/.julia:/usr/local/share/julia:", "JULIA_NUM_THREADS=1", "RATTLER_CACHE_DIR=/home/pkgeval/.julia/scratchspaces/992eb4ea-22a4-4c89-a5bb-47a3300528ab/pixi_cache"]), ProcessExited(1)) [1]  Stacktrace:  [1] pipeline_error  @ ./process.jl:598 [inlined]  [2] run(::Cmd; wait::Bool)  @ Base ./process.jl:513  [3] run(::Cmd)  @ Base ./process.jl:510  [4] _run(io::IO, cmd::Cmd, args::Any; flags::Any)  @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:679  [5] _run(io::IO, cmd::Cmd, args::Any)  @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:673  [6] (::CondaPkg.var"#70#79"{Bool, Base.PipeEndpoint, String, Vector{CondaPkg.PipPkgSpec}, Vector{CondaPkg.PkgSpec}, Vector{CondaPkg.ChannelSpec}})()  @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:964  [7] cd(f::CondaPkg.var"#70#79"{Bool, Base.PipeEndpoint, String, Vector{CondaPkg.PipPkgSpec}, Vector{CondaPkg.PkgSpec}, Vector{CondaPkg.ChannelSpec}}, dir::String)  @ Base.Filesystem ./file.jl:112  [8] resolve(; force::Bool, io::IO, interactive::Bool, dry_run::Bool)  @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:904  [9] resolve()  @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:682  [10] envdir()  @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/env.jl:70  [11] init_context()  @ PythonCall.C ~/.julia/packages/PythonCall/WMWY0/src/C/context.jl:63  [12] __init__()  @ PythonCall.C ~/.julia/packages/PythonCall/WMWY0/src/C/C.jl:23  [13] run_module_init(mod::Module, i::Int64)  @ Base ./loading.jl:1378  [14] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)  @ Base ./loading.jl:1366  [15] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool)  @ Base ./loading.jl:1254  [16] _include_from_serialized (repeats 2 times)  @ ./loading.jl:1210 [inlined]  [17] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2057  [18] _require(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2527  [19] __require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2388  [20] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [21] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [22] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2375  [23] macro expansion  @ ./loading.jl:2314 [inlined]  [24] macro expansion  @ ./lock.jl:273 [inlined]  [25] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2271  [26] #invoke_in_world#3  @ ./essentials.jl:1089 [inlined]  [27] invoke_in_world  @ ./essentials.jl:1086 [inlined]  [28] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2260  [29] include  @ ./Base.jl:557 [inlined]  [30] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2881  [31] top-level scope  @ stdin:6 during initialization of module C in expression starting at /home/pkgeval/.julia/packages/AllenNeuropixels/NVGC2/src/AllenNeuropixels.jl:1 in expression starting at stdin:6 ✗ AllenNeuropixels 0 dependencies successfully precompiled in 74 seconds. 429 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: AllenNeuropixels Failed to precompile AllenNeuropixels [c7dbd8d7-5c13-4dcb-90e2-bff79a096f56] to "/home/pkgeval/.julia/compiled/v1.11/AllenNeuropixels/jl_NoWZVf". CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyFOOOF/bExoX/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/WMWY0/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/NWBStream/8csZ3/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/AllenSDK/5o86m/CondaPkg.toml CondaPkg Resolving changes + aiohttp + allensdk (pip) + argschema (pip) + fooof + fsspec + h5py + hdmf + libstdcxx-ng + ndx-events (pip) + openssl + pynwb + python + requests + uv + wheel CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ init │ --format pixi └ /tmp/jl_QqJZWI/.CondaPkg ✔ Created /tmp/jl_QqJZWI/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_QqJZWI/.CondaPkg/pixi.toml │ [dependencies] │ openssl = ">=1.1, <1.1.24" │ aiohttp = "*" │ libstdcxx-ng = ">=3.4,<13.0" │ h5py = "*" │ fooof = ">=1.0, <2" │ uv = ">=0.4" │ pynwb = "*" │ fsspec = "*" │ hdmf = ">3.6" │ wheel = "*" │ requests = "*" │ │ [dependencies.python] │ channel = "conda-forge" │ build = "*cpython*" │ version = ">=3.8,<4, >=3.5,<4, >=3.9,<=3.11" │ │ [project] │ name = ".CondaPkg" │ platforms = ["linux-64"] │ channels = ["conda-forge", "anaconda"] │ channel-priority = "strict" │ description = "automatically generated by CondaPkg.jl" │ │ [pypi-dependencies.ndx-events] │ url = "https://github.com/rly/ndx-events/archive/refs/tags/0.2.0.zip" │ │ [pypi-dependencies.allensdk] │ url = "https://github.com/AllenInstitute/AllenSDK/archive/refs/tags/v2.16.2.zip" │ │ [pypi-dependencies.argschema] └ url = "https://github.com/AllenInstitute/argschema/archive/refs/tags/v3.0.1.zip" CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ install └ --manifest-path /tmp/jl_QqJZWI/.CondaPkg/pixi.toml Error: × failed to solve the pypi requirements of 'default' 'linux-64' ├─▶ failed to resolve pypi dependencies ╰─▶ Because allensdk==2.16.2 depends on scipy<1.11 and scipy==1.15.2, we can conclude that allensdk==2.16.2 cannot be used. And because only allensdk==2.16.2 is available and you require allensdk, we can conclude that your requirements are unsatisfiable. ERROR: LoadError: InitError: failed process: Process(setenv(`/home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi install --manifest-path /tmp/jl_QqJZWI/.CondaPkg/pixi.toml`,["PYTHON=", "PIXI_CACHE_DIR=/home/pkgeval/.julia/scratchspaces/992eb4ea-22a4-4c89-a5bb-47a3300528ab/pixi_cache", "PATH=/home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin", "DISPLAY=:1", "LD_LIBRARY_PATH=/opt/julia/bin/../lib/julia:/opt/julia/bin/../lib", "OPENBLAS_NUM_THREADS=1", "CI=true", "R_HOME=*", "LANG=C.UTF-8", "JULIA_CPU_THREADS=1", "JULIA_NUM_PRECOMPILE_TASKS=1", "JULIA_LOAD_PATH=/tmp/jl_QqJZWI/Project.toml", "PKGEVAL=true", "HOME=/home/pkgeval", "JULIA_PKG_PRECOMPILE_AUTO=0", "JULIA_PKGEVAL=true", "OPENBLAS_MAIN_FREE=1", "JULIA_DEPOT_PATH=/home/pkgeval/.julia:/usr/local/share/julia:", "JULIA_NUM_THREADS=1", "RATTLER_CACHE_DIR=/home/pkgeval/.julia/scratchspaces/992eb4ea-22a4-4c89-a5bb-47a3300528ab/pixi_cache"]), ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:598 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:513 [3] run(::Cmd) @ Base ./process.jl:510 [4] _run(io::IO, cmd::Cmd, args::Any; flags::Any) @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:679 [5] _run(io::IO, cmd::Cmd, args::Any) @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:673 [6] (::CondaPkg.var"#70#79"{Bool, Base.PipeEndpoint, String, Vector{CondaPkg.PipPkgSpec}, Vector{CondaPkg.PkgSpec}, Vector{CondaPkg.ChannelSpec}})() @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:964 [7] cd(f::CondaPkg.var"#70#79"{Bool, Base.PipeEndpoint, String, Vector{CondaPkg.PipPkgSpec}, Vector{CondaPkg.PkgSpec}, Vector{CondaPkg.ChannelSpec}}, dir::String) @ Base.Filesystem ./file.jl:112 [8] resolve(; force::Bool, io::IO, interactive::Bool, dry_run::Bool) @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:904 [9] resolve() @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/resolve.jl:682 [10] envdir() @ CondaPkg ~/.julia/packages/CondaPkg/1wHLv/src/env.jl:70 [11] init_context() @ PythonCall.C ~/.julia/packages/PythonCall/WMWY0/src/C/context.jl:63 [12] __init__() @ PythonCall.C ~/.julia/packages/PythonCall/WMWY0/src/C/C.jl:23 [13] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1378 [14] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1366 [15] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1254 [16] _include_from_serialized (repeats 2 times) @ ./loading.jl:1210 [inlined] [17] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2057 [18] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2527 [19] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2388 [20] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [21] invoke_in_world @ ./essentials.jl:1086 [inlined] [22] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2375 [23] macro expansion @ ./loading.jl:2314 [inlined] [24] macro expansion @ ./lock.jl:273 [inlined] [25] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2271 [26] #invoke_in_world#3 @ ./essentials.jl:1089 [inlined] [27] invoke_in_world @ ./essentials.jl:1086 [inlined] [28] require(into::Module, mod::Symbol) @ Base ./loading.jl:2260 [29] include @ ./Base.jl:557 [inlined] [30] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2881 [31] top-level scope @ stdin:6 during initialization of module C in expression starting at /home/pkgeval/.julia/packages/AllenNeuropixels/NVGC2/src/AllenNeuropixels.jl:1 in expression starting at stdin: in expression starting at /home/pkgeval/.julia/packages/AllenNeuropixels/NVGC2/test/runtests.jl:1 Testing failed after 81.38s ERROR: LoadError: Package AllenNeuropixels errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2124 [3] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/Operations.jl:2007 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.11/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 2437.96s: package fails to precompile