Package evaluation of TopologicalNumbers on Julia 1.12.0-DEV.1805 (a080deafdd*) started at 2025-03-24T16:38:51.413


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.19s


################################################################################
# Installation
#

Installing TopologicalNumbers...
   Resolving package versions...
    Updating `~/.julia/environments/v1.12/Project.toml`
  [82b459e2] + TopologicalNumbers v1.7.6
    Updating `~/.julia/environments/v1.12/Manifest.toml`
  [7d9f7c33] + Accessors v0.1.42
  [3da002f7] + ColorTypes v0.12.0
  [5ae59095] + Colors v0.13.0
  [a33af91c] + CompositionsBase v0.1.2
  [992eb4ea] + CondaPkg v0.2.26
  [187b0558] + ConstructionBase v1.5.8
  [9a962f9c] + DataAPI v1.16.0
  [e2d170a0] + DataValueInterfaces v1.0.0
  [53c48c17] + FixedPointNumbers v0.8.5
  [3587e190] + InverseFunctions v0.1.17
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [0f8b85d8] + JSON3 v1.14.1
  [b964fa9f] + LaTeXStrings v1.4.0
  [1914dd2f] + MacroTools v0.5.15
  [0b3b1443] + MicroMamba v0.1.14
  [bac558e1] + OrderedCollections v1.8.0
  [d96e819e] + Parameters v0.12.3
  [69de0a69] + Parsers v2.8.1
  [fa939f87] + Pidfile v1.3.0
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [49802e3a] + ProgressBars v1.5.1
  [6099a3de] + PythonCall v0.9.24
  [274fc56d] + PythonPlot v1.0.6
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [6c6a2e73] + Scratch v1.2.1
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [856f2bd8] + StructTypes v1.11.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [82b459e2] + TopologicalNumbers v1.7.6
  [3a884ed6] + UnPack v1.0.2
  [e17b2a0c] + UnsafePointers v1.0.0
  [81def892] + VersionParsing v1.3.0
  [f8abcde7] + micromamba_jll v1.5.8+0
  [4d7b5844] + pixi_jll v0.41.3+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [dc6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.12.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.2.0+0
  [deac9b47] + LibCURL_jll v8.6.0+0
  [e37daf67] + LibGit2_jll v1.8.0+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.6+1
  [14a3606d] + MozillaCACerts_jll v2024.11.26
  [4536629a] + OpenBLAS_jll v0.3.28+3
  [bea87d4a] + SuiteSparse_jll v7.8.0+1
  [83775a58] + Zlib_jll v1.3.1+1
  [8e850b90] + libblastrampoline_jll v5.11.2+0
  [8e850ede] + nghttp2_jll v1.63.0+1
  [3f19e933] + p7zip_jll v17.5.0+1

Installation completed after 3.63s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 168.92s


################################################################################
# Testing
#

     Testing TopologicalNumbers
      Status `/tmp/jl_4T40Dx/Project.toml`
⌅ [4c88cf16] Aqua v0.6.7
  [992eb4ea] CondaPkg v0.2.26
  [98e50ef6] JuliaFormatter v1.0.62
  [da04e1cc] MPI v0.20.22
  [6099a3de] PythonCall v0.9.24
  [274fc56d] PythonPlot v1.0.6
  [82b459e2] TopologicalNumbers v1.7.6
  [37e2e46d] LinearAlgebra v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_4T40Dx/Manifest.toml`
  [7d9f7c33] Accessors v0.1.42
⌅ [4c88cf16] Aqua v0.6.7
  [00ebfdb7] CSTParser v3.4.3
  [3da002f7] ColorTypes v0.12.0
  [5ae59095] Colors v0.13.0
⌅ [a80b9123] CommonMark v0.8.15
  [34da2185] Compat v4.16.0
  [a33af91c] CompositionsBase v0.1.2
  [992eb4ea] CondaPkg v0.2.26
  [187b0558] ConstructionBase v1.5.8
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [ffbed154] DocStringExtensions v0.9.3
  [53c48c17] FixedPointNumbers v0.8.5
  [c27321d9] Glob v1.3.1
  [3587e190] InverseFunctions v0.1.17
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [0f8b85d8] JSON3 v1.14.1
  [98e50ef6] JuliaFormatter v1.0.62
  [b964fa9f] LaTeXStrings v1.4.0
  [da04e1cc] MPI v0.20.22
  [3da0fdf6] MPIPreferences v0.1.11
  [1914dd2f] MacroTools v0.5.15
  [0b3b1443] MicroMamba v0.1.14
  [bac558e1] OrderedCollections v1.8.0
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.1
  [fa939f87] Pidfile v1.3.0
  [eebad327] PkgVersion v0.3.3
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [49802e3a] ProgressBars v1.5.1
  [6099a3de] PythonCall v0.9.24
  [274fc56d] PythonPlot v1.0.6
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [6c6a2e73] Scratch v1.2.1
  [90137ffa] StaticArrays v1.9.13
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [856f2bd8] StructTypes v1.11.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [0796e94c] Tokenize v0.5.29
  [82b459e2] TopologicalNumbers v1.7.6
  [3a884ed6] UnPack v1.0.2
  [e17b2a0c] UnsafePointers v1.0.0
  [81def892] VersionParsing v1.3.0
  [e33a78d0] Hwloc_jll v2.12.0+0
  [7cb0a576] MPICH_jll v4.3.0+1
  [f1f71cc9] MPItrampoline_jll v5.5.3+0
  [9237b28f] MicrosoftMPI_jll v10.1.4+3
  [fe0851c0] OpenMPI_jll v5.0.7+1
  [f8abcde7] micromamba_jll v1.5.8+0
  [4d7b5844] pixi_jll v0.41.3+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [dc6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.12.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.2.0+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.8.0+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+1
  [14a3606d] MozillaCACerts_jll v2024.11.26
  [4536629a] OpenBLAS_jll v0.3.28+3
  [bea87d4a] SuiteSparse_jll v7.8.0+1
  [83775a58] Zlib_jll v1.3.1+1
  [8e850b90] libblastrampoline_jll v5.11.2+0
  [8e850ede] nghttp2_jll v1.63.0+1
  [3f19e933] p7zip_jll v17.5.0+1
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
ERROR: LoadError: InitError: ConcurrencyViolationError("deadlock detected in loading pixi_jll -> pixi_jll && TopologicalNumbers && StyledStringsExt && PythonPlot && FixedPointNumbers && PythonCall && Reexport && Statistics && SparseArraysExt && LazyArtifacts && VersionParsing && StaticArraysStatisticsExt && JLLWrappers && ColorTypes && Colors")
Stacktrace:
  [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool)
    @ Base ./loading.jl:2209
  [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool)
    @ Base ./loading.jl:2217
  [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)
    @ Base ./loading.jl:2479
  [4] _require_prelocked
    @ ./loading.jl:2478 [inlined]
  [5] macro expansion
    @ ./lock.jl:294 [inlined]
  [6] __require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:2476
  [7] #invoke_in_world#2
    @ ./essentials.jl:1091 [inlined]
  [8] invoke_in_world
    @ ./essentials.jl:1087 [inlined]
  [9] require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:2474
 [10] pixi_jll_module()
    @ CondaPkg ~/.julia/packages/CondaPkg/pEObH/src/CondaPkg.jl:37
 [11] backend()
    @ CondaPkg ~/.julia/packages/CondaPkg/pEObH/src/backend.jl:17
 [12] init_context()
    @ PythonCall.C ~/.julia/packages/PythonCall/WMWY0/src/C/context.jl:55
 [13] __init__()
    @ PythonCall.C ~/.julia/packages/PythonCall/WMWY0/src/C/C.jl:23
 [14] run_module_init(mod::Module, i::Int64)
    @ Base ./loading.jl:1419
 [15] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1407
 [16] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool)
    @ Base ./loading.jl:1295
 [17] _include_from_serialized (repeats 2 times)
    @ ./loading.jl:1246 [inlined]
 [18] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
    @ Base ./loading.jl:2108
 [19] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2621
 [20] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2484
 [21] macro expansion
    @ ./loading.jl:2412 [inlined]
 [22] macro expansion
    @ ./lock.jl:294 [inlined]
 [23] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2369
 [24] #invoke_in_world#2
    @ ./essentials.jl:1091 [inlined]
 [25] invoke_in_world
    @ ./essentials.jl:1087 [inlined]
 [26] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2361
 [27] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:301
 [28] top-level scope
    @ none:6
 [29] eval(m::Module, e::Any)
    @ Core ./boot.jl:485
 [30] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:295
 [31] _start()
    @ Base ./client.jl:558
during initialization of module C
in expression starting at /home/pkgeval/.julia/packages/TopologicalNumbers/MLWsm/test/runtests.jl:1

Testing failed after 29.36s

ERROR: LoadError: Package TopologicalNumbers errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2359
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2214 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:481
  [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:159
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:147
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:147 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:146 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:300
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [12] _start()
    @ Base ./client.jl:558
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 270.31s: package tests unexpectedly errored