Package evaluation of SequenceVariation on Julia 1.12.0-DEV.1805 (a080deafdd*) started at 2025-03-24T12:36:51.737


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.14s


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# Installation
#

Installing SequenceVariation...
   Resolving package versions...
    Updating `~/.julia/environments/v1.12/Project.toml`
  [eef6e190] + SequenceVariation v0.2.2
    Updating `~/.julia/environments/v1.12/Manifest.toml`
  [00701ae9] + BioAlignments v3.1.0
  [47718e42] + BioGenerics v0.1.5
  [7e6ae17a] + BioSequences v3.4.1
  [3c28c6f8] + BioSymbols v5.1.3
  [524e6230] + IntervalTrees v1.1.0
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [eef6e190] + SequenceVariation v0.2.2
  [3bb67fe8] + TranscodingStreams v0.11.3
  [7200193e] + Twiddle v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [fa267f1f] + TOML v1.0.3
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.2.0+0
  [4536629a] + OpenBLAS_jll v0.3.28+3
  [8e850b90] + libblastrampoline_jll v5.11.2+0

Installation completed after 1.62s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 18.99s


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# Testing
#

     Testing SequenceVariation
      Status `/tmp/jl_rfD2dt/Project.toml`
⌅ [4c88cf16] Aqua v0.6.7
  [00701ae9] BioAlignments v3.1.0
  [47718e42] BioGenerics v0.1.5
  [7e6ae17a] BioSequences v3.4.1
  [3c28c6f8] BioSymbols v5.1.3
  [eef6e190] SequenceVariation v0.2.2
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_rfD2dt/Manifest.toml`
⌅ [4c88cf16] Aqua v0.6.7
  [00701ae9] BioAlignments v3.1.0
  [47718e42] BioGenerics v0.1.5
  [7e6ae17a] BioSequences v3.4.1
  [3c28c6f8] BioSymbols v5.1.3
  [34da2185] Compat v4.16.0
  [524e6230] IntervalTrees v1.1.0
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [eef6e190] SequenceVariation v0.2.2
  [3bb67fe8] TranscodingStreams v0.11.3
  [7200193e] Twiddle v1.1.2
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [dc6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.12.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.2.0+0
  [deac9b47] LibCURL_jll v8.6.0+0
  [e37daf67] LibGit2_jll v1.8.0+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+1
  [14a3606d] MozillaCACerts_jll v2024.11.26
  [4536629a] OpenBLAS_jll v0.3.28+3
  [83775a58] Zlib_jll v1.3.1+1
  [8e850b90] libblastrampoline_jll v5.11.2+0
  [8e850ede] nghttp2_jll v1.63.0+1
  [3f19e933] p7zip_jll v17.5.0+1
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Test Summary: | Pass  Total  Time
EditSorting   |    2      2  0.1s
Test Summary:       | Pass  Total  Time
HaplotypeValidation |   11     11  0.8s
Test Summary:      | Pass  Total  Time
HaplotypeRoundtrip |    8      8  0.4s
Test Summary:           | Pass  Total  Time
HaplotypeReconstruction |    1      1  0.7s
Test Summary:    | Pass  Total  Time
VariationSorting |    1      1  0.0s
Test Summary:        | Pass  Total  Time
HaplotypeTranslation |    1      1  0.8s
Test Summary:     | Pass  Total  Time
VariationPosition |    1      1  0.4s
Test Summary:    | Pass  Total  Time
VariationParsing |    3      3  0.0s
Test Summary:      | Pass  Total  Time
VariationRetrieval |    1      1  0.0s
Test Summary:        | Pass  Total  Time
VariationTranslation |   10     10  0.1s
Test Summary:  | Pass  Total  Time
VariationBases |   14     14  0.9s
Test Summary:     | Pass  Total  Time
SoftclipHaplotype |    4      4  0.0s
Test Summary: | Pass  Total   Time
Aqua          |    8      8  24.7s
     Testing SequenceVariation tests passed 

Testing completed after 43.87s

PkgEval succeeded after 83.76s