Package evaluation of Polymer on Julia 1.12.0-DEV.1805 (a080deafdd*) started at 2025-03-24T13:37:34.635 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.12s ################################################################################ # Installation # Installing Polymer... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [3c6f16a5] + Polymer v0.8.11 Updating `~/.julia/environments/v1.12/Manifest.toml` [dce04be8] + ArgCheck v2.5.0 [5218b696] + Configurations v0.17.6 [187b0558] + ConstructionBase v1.5.8 [55351af7] + ExproniconLite v0.10.14 [692b3bcd] + JLLWrappers v1.7.0 [b964fa9f] + LaTeXStrings v1.4.0 [1914dd2f] + MacroTools v0.5.15 [bac558e1] + OrderedCollections v1.8.0 [3c6f16a5] + Polymer v0.8.11 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [efcf1570] + Setfield v1.1.2 [1e83bf80] + StaticArraysCore v1.4.3 [69024149] + StringEncodings v0.3.7 [ddb6d928] + YAML v0.4.13 [94ce4f54] + Libiconv_jll v1.18.0+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [dc6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.2.0+0 [4536629a] + OpenBLAS_jll v0.3.28+3 [8e850b90] + libblastrampoline_jll v5.11.2+0 Installation completed after 2.22s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 38.38s ################################################################################ # Testing # Testing Polymer Status `/tmp/jl_q7lkXa/Project.toml` [3c6f16a5] Polymer v0.8.11 [8dfed614] Test v1.11.0 Status `/tmp/jl_q7lkXa/Manifest.toml` [dce04be8] ArgCheck v2.5.0 [5218b696] Configurations v0.17.6 [187b0558] ConstructionBase v1.5.8 [55351af7] ExproniconLite v0.10.14 [692b3bcd] JLLWrappers v1.7.0 [b964fa9f] LaTeXStrings v1.4.0 [1914dd2f] MacroTools v0.5.15 [bac558e1] OrderedCollections v1.8.0 [3c6f16a5] Polymer v0.8.11 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [efcf1570] Setfield v1.1.2 [1e83bf80] StaticArraysCore v1.4.3 [69024149] StringEncodings v0.3.7 [ddb6d928] YAML v0.4.13 [94ce4f54] Libiconv_jll v1.18.0+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [dc6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.2.0+0 [4536629a] OpenBLAS_jll v0.3.28+3 [8e850b90] libblastrampoline_jll v5.11.2+0 Testing Running tests... Test Summary: | Pass Total Time utils.jl | 8 8 2.1s Test Summary: | Pass Total Time parameters.jl: AbstractParameter | 8 8 0.1s Test Summary: | Pass Total Time chiN.jl: _species | 2 2 0.2s Test Summary: | Pass Total Time chiN.jl: _check_consistency | 3 3 0.1s Test Summary: | Pass Total Time chiN.jl: _χNmap_to_matrix | 3 3 0.9s Test Summary: | Pass Total Time chiN.jl: χNMatrix | 5 5 7.0s Test Summary: | Pass Total Time chiN.jl: getindex | 11 11 0.1s Test Summary: | Pass Total Time chiN.jl: setindex | 13 13 0.9s Test Summary: | Pass Total Time types.jl: Confinement | 6 6 0.0s Test Summary: | Pass Total Time types.jl: Charge | 3 3 0.0s Test Summary: | Pass Total Time types.jl: Specie | 2 2 0.0s Test Summary: | Pass Total Time types.jl: Block | 1 1 0.0s Test Summary: | Pass Total Time types.jl: Component | 6 6 0.5s Test Summary: | Pass Total Time types.jl: Polymer System AB+S | 15 15 1.1s Test Summary: | Pass Total Time types.jl: Polymer System AB+A | 13 13 0.7s Test Summary: | Pass Total Time properties.jl | 61 61 5.3s Test Summary: | Pass Total Time properties.jl: label | 12 12 0.5s Test Summary: | Pass Total Time properties.jl: specie, species | 9 9 0.1s Test Summary: | Pass Total Time update.jl: χNParam | 3 3 0.8s Test Summary: | Pass Total Time update.jl: molecule | 3 3 0.1s Test Summary: | Pass Total Time update.jl: ϕParam | 8 8 0.5s Test Summary: | Pass Total Time update.jl: αParam | 14 14 0.4s Test Summary: | Pass Total Time update.jl: fParam | 13 13 1.1s Test Summary: | Pass Total Time update.jl: bParam | 16 16 0.8s Test Summary: | Pass Total Time update.jl: AbstractControlParameter | 19 19 1.6s Test Summary: | Pass Total Time systems.jl: Components | 5 5 0.0s Test Summary: | Pass Total Time systems.jl: Systems | 15 15 0.0s Test Summary: | Pass Total Time config.jl: load_config | 1 1 19.9s config.jl: save_config: Error During Test at /home/pkgeval/.julia/packages/Polymer/wUG9S/test/test_config.jl:7 Got exception outside of a @test SystemError: opening file "/home/pkgeval/.julia/packages/Polymer/wUG9S/test/ABS_save.yml": Permission denied Stacktrace: [1] systemerror(p::String, errno::Int32; extrainfo::Nothing) @ Base ./error.jl:186 [2] open(fname::String; lock::Bool, read::Nothing, write::Nothing, create::Nothing, truncate::Bool, append::Nothing) @ Base ./iostream.jl:317 [3] open @ ./iostream.jl:296 [inlined] [4] open(fname::String, mode::String; lock::Bool) @ Base ./iostream.jl:380 [5] open(fname::String, mode::String) @ Base ./iostream.jl:379 [6] open(::YAML.var"#write_file##0#write_file##1"{OrderedCollections.OrderedDict{String, Any}, String}, ::String, ::Vararg{String}; kwargs::@Kwargs{}) @ Base ./io.jl:408 [7] open @ ./io.jl:407 [inlined] [8] write_file (repeats 2 times) @ ~/.julia/packages/YAML/ZnjQE/src/writer.jl:13 [inlined] [9] save_config(yamlfile::String, config::PolymerSystemConfig) @ Polymer ~/.julia/packages/Polymer/wUG9S/src/config.jl:53 [10] top-level scope @ ~/.julia/packages/Polymer/wUG9S/test/test_config.jl:8 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1724 [inlined] [12] macro expansion @ ~/.julia/packages/Polymer/wUG9S/test/test_config.jl:11 [inlined] [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:301 [14] top-level scope @ ~/.julia/packages/Polymer/wUG9S/test/runtests.jl:11 [15] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:301 [16] top-level scope @ none:6 [17] eval(m::Module, e::Any) @ Core ./boot.jl:485 [18] exec_options(opts::Base.JLOptions) @ Base ./client.jl:295 [19] _start() @ Base ./client.jl:558 Test Summary: | Error Total Time config.jl: save_config | 1 1 6.1s ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/Polymer/wUG9S/test/test_config.jl:7 in expression starting at /home/pkgeval/.julia/packages/Polymer/wUG9S/test/runtests.jl:11 Testing failed after 64.23s ERROR: LoadError: Package Polymer errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2359 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2214 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:159 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:147 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:147 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:146 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:300 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [12] _start() @ Base ./client.jl:558 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 128.13s: package tests unexpectedly errored