Package evaluation of MuseInference on Julia 1.12.0-DEV.1805 (a080deafdd*) started at 2025-03-24T21:11:32.806 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.1s ################################################################################ # Installation # Installing MuseInference... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [43b88160] + MuseInference v0.2.4 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.14.0 ⌅ [c29ec348] + AbstractDifferentiation v0.5.3 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.18.0 [d360d2e6] + ChainRulesCore v1.25.1 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 ⌅ [b0b7db55] + ComponentArrays v0.13.15 [187b0558] + ConstructionBase v1.5.8 [587fd27a] + CovarianceEstimation v0.2.13 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.48 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.3 [e2ba6199] + ExprTools v0.1.10 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [26cc04aa] + FiniteDifferences v0.12.32 [f6369f11] + ForwardDiff v0.10.38 ⌅ [d9f16b24] + Functors v0.4.12 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.4 [42fd0dbc] + IterativeSolvers v0.9.4 [692b3bcd] + JLLWrappers v1.7.0 [d3d80556] + LineSearches v7.3.0 [7a12625a] + LinearMaps v3.11.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [43b88160] + MuseInference v0.2.4 [d41bc354] + NLSolversBase v7.9.0 [77ba4419] + NaNMath v1.1.2 [d9ec5142] + NamedTupleTools v0.14.3 [429524aa] + Optim v1.11.0 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.32 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.2 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [708f8203] + Richardson v1.4.2 [79098fc4] + Rmath v0.8.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 [9449cd9e] + TSVD v0.4.4 [3a884ed6] + UnPack v1.0.2 [efce3f68] + WoodburyMatrices v1.0.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [dc6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.2.0+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.8.0+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+1 [14a3606d] + MozillaCACerts_jll v2024.11.26 [4536629a] + OpenBLAS_jll v0.3.28+3 [05823500] + OpenLibm_jll v0.8.1+3 [bea87d4a] + SuiteSparse_jll v7.8.0+1 [83775a58] + Zlib_jll v1.3.1+1 [8e850b90] + libblastrampoline_jll v5.11.2+0 [8e850ede] + nghttp2_jll v1.63.0+1 [3f19e933] + p7zip_jll v17.5.0+1 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.31s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.11/activate_set.jl:63 Precompiling package dependencies... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 7 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#551 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait_readnb at ./stream.jl:416 eof at ./stream.jl:106 [inlined] eof at ./io.jl:472 [inlined] monitor_std at ./precompilation.jl:763 monitor_std at ./precompilation.jl:759 unknown function (ip: 0x736b3496d2e5) at (unknown file) _jl_invoke at /source/src/gf.c:3359 [inlined] ijl_apply_generic at /source/src/gf.c:3547 #_precompilepkgs##49 at ./precompilation.jl:928 jfptr_YY._precompilepkgsYY.YY.49_105726.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3359 [inlined] ijl_apply_generic at /source/src/gf.c:3547 jl_apply at /source/src/julia.h:2244 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1353 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000736af41faed0 Total snapshots: 268. Utilization: 0% ╎268 @Base/precompilation.jl:928 (::Base.Precompilation.var"#_precompilepkg… ╎ 268 @Base/precompilation.jl:759 kwcall(::@NamedTuple{single_requested_pkg… ╎ 268 @Base/…ecompilation.jl:763 (::Base.Precompilation.var"#monitor_std#_… ╎ 268 @Base/io.jl:472 eof ╎ 268 @Base/stream.jl:106 eof ╎ 268 @Base/stream.jl:416 wait_readnb(x::Base.PipeEndpoint, nb::Int64) ╎ ╎ 268 @Base/condition.jl:136 wait ╎ ╎ 268 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threa… ╎ ╎ 268 @Base/task.jl:1199 wait() 267╎ ╎ 268 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchro… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 task_done_hook at ./task.jl:839 jfptr_task_done_hook_97764.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3359 [inlined] ijl_apply_generic at /source/src/gf.c:3547 jl_apply at /source/src/julia.h:2244 [inlined] jl_finish_task at /source/src/task.c:345 start_task at /source/src/task.c:1292 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1353 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000733126a8d220 Total snapshots: 405. Utilization: 0% ╎405 @Base/task.jl:839 task_done_hook(t::Task) ╎ 405 @Base/task.jl:1199 wait() 404╎ 405 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [7] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:152 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 poptask at ./task.jl:1187 wait at ./task.jl:1199 wait at ./task.jl:1199 #wait#551 at ./condition.jl:141 #wait#551 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait_readnb at ./stream.jl:416 eof at ./stream.jl:106 [inlined] eof at ./io.jl:472 [inlined] monitor_std at ./precompilation.jl:763 monitor_std at ./precompilation.jl:759 unknown function (ip: 0x736b3496d2e5) at (unknown file) _jl_invoke at /source/src/gf.c:3359 [inlined] ijl_apply_generic at /source/src/gf.c:3547 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:145 #_precompilepkgs##49 at ./precompilation.jl:928 profile_printing_listener at ./Base.jl:326 jfptr_YY._precompilepkgsYY.YY.49_105726.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3359 [inlined] ijl_apply_generic at /source/src/gf.c:3547 jl_apply at /source/src/julia.h:2244 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) Allocations: 35208043 (Pool: 35207038; Big: 1005); GC: 30 #start_profile_listener##0 at ./Base.jl:346 jfptr_YY.start_profile_listenerYY.YY.0_111230.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3359 [inlined] ijl_apply_generic at /source/src/gf.c:3547 jl_apply at /source/src/julia.h:2244 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) Allocations: 13826323 (Pool: 13825803; Big: 520); GC: 11 PkgEval terminated after 2757.97s: test duration exceeded the time limit