Package evaluation of MolecularTrajectories on Julia 1.12.0-DEV.1805 (a080deafdd*) started at 2025-03-24T12:28:04.963


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.4s


################################################################################
# Installation
#

Installing MolecularTrajectories...
   Resolving package versions...
    Updating `~/.julia/environments/v1.12/Project.toml`
  [c3751834] + MolecularTrajectories v2.1.0
    Updating `~/.julia/environments/v1.12/Manifest.toml`
  [aea3f91d] + MolecularBoxes v1.0.1
  [c3751834] + MolecularTrajectories v2.1.0
⌅ [90137ffa] + StaticArrays v0.12.6
  [10745b16] + Statistics v1.11.1
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [dc6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.11.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [8dfed614] + Test v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.2.0+0
  [4536629a] + OpenBLAS_jll v0.3.28+3
  [8e850b90] + libblastrampoline_jll v5.11.2+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 1.07s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
ERROR: LoadError: The following 1 direct dependency failed to precompile:

MolecularTrajectories 

Failed to precompile MolecularTrajectories [c3751834-3f3f-50ce-917e-73bb091d662c] to "/home/pkgeval/.julia/compiled/v1.12/MolecularTrajectories/jl_7o4CNI".
ERROR: LoadError: UndefVarError: `Printf` not defined in `Base`
Stacktrace:
  [1] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:301
  [2] top-level scope
    @ ~/.julia/packages/MolecularTrajectories/7h18N/src/MolecularTrajectories.jl:29
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:300
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2995
  [5] top-level scope
    @ stdin:6
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:485
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2846
  [8] include_string
    @ ./loading.jl:2856 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:327
 [10] _start()
    @ Base ./client.jl:558
in expression starting at /home/pkgeval/.julia/packages/MolecularTrajectories/7h18N/src/Gromacs.jl:5
in expression starting at /home/pkgeval/.julia/packages/MolecularTrajectories/7h18N/src/MolecularTrajectories.jl:2
in expression starting at stdin:
in expression starting at /PkgEval.jl/scripts/precompile.jl:37

Precompilation failed after 22.6s



################################################################################
# Testing
#

     Testing MolecularTrajectories
      Status `/tmp/jl_ggBwhn/Project.toml`
  [aea3f91d] MolecularBoxes v1.0.1
  [57484d9e] MolecularTopologies v1.1.2
  [c3751834] MolecularTrajectories v2.1.0
⌅ [90137ffa] StaticArrays v0.12.6
  [de0858da] Printf v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_ggBwhn/Manifest.toml`
  [aea3f91d] MolecularBoxes v1.0.1
  [57484d9e] MolecularTopologies v1.1.2
  [c3751834] MolecularTrajectories v2.1.0
⌅ [90137ffa] StaticArrays v0.12.6
  [10745b16] Statistics v1.11.1
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [dc6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [f489334b] StyledStrings v1.11.0
  [8dfed614] Test v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.2.0+0
  [4536629a] OpenBLAS_jll v0.3.28+3
  [8e850b90] libblastrampoline_jll v5.11.2+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Precompiling packages...
Info Given MolecularTrajectories was explicitly requested, output will be shown live 
ERROR: LoadError: UndefVarError: `Printf` not defined in `Base`
Stacktrace:
  [1] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:301
  [2] top-level scope
    @ ~/.julia/packages/MolecularTrajectories/7h18N/src/MolecularTrajectories.jl:29
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:300
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2995
  [5] top-level scope
    @ stdin:6
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:485
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2846
  [8] include_string
    @ ./loading.jl:2856 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:327
 [10] _start()
    @ Base ./client.jl:558
in expression starting at /home/pkgeval/.julia/packages/MolecularTrajectories/7h18N/src/Gromacs.jl:5
in expression starting at /home/pkgeval/.julia/packages/MolecularTrajectories/7h18N/src/MolecularTrajectories.jl:2
in expression starting at stdin:6
           ✗ MolecularTrajectories
  0 dependencies successfully precompiled in 5 seconds. 11 already precompiled.

ERROR: LoadError: The following 1 direct dependency failed to precompile:

MolecularTrajectories 

Failed to precompile MolecularTrajectories [c3751834-3f3f-50ce-917e-73bb091d662c] to "/home/pkgeval/.julia/compiled/v1.12/MolecularTrajectories/jl_bidpmN".
ERROR: LoadError: UndefVarError: `Printf` not defined in `Base`
Stacktrace:
  [1] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:301
  [2] top-level scope
    @ ~/.julia/packages/MolecularTrajectories/7h18N/src/MolecularTrajectories.jl:29
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:300
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2995
  [5] top-level scope
    @ stdin:6
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:485
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2846
  [8] include_string
    @ ./loading.jl:2856 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:327
 [10] _start()
    @ Base ./client.jl:558
in expression starting at /home/pkgeval/.julia/packages/MolecularTrajectories/7h18N/src/Gromacs.jl:5
in expression starting at /home/pkgeval/.julia/packages/MolecularTrajectories/7h18N/src/MolecularTrajectories.jl:2
in expression starting at stdin:
in expression starting at /home/pkgeval/.julia/packages/MolecularTrajectories/7h18N/test/runtests.jl:4

Testing failed after 12.46s

ERROR: LoadError: Package MolecularTrajectories errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2359
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2214 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:481
  [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:159
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:147
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:147 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:146 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:300
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [12] _start()
    @ Base ./client.jl:558
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 61.86s: package fails to precompile