Package evaluation of LaplaceRedux on Julia 1.12.0-DEV.1805 (a080deafdd*) started at 2025-03-24T23:44:18.609 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.17s ################################################################################ # Installation # Installing LaplaceRedux... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [c52c1a26] + LaplaceRedux v1.2.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [a9b6321e] + Atomix v1.1.1 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [fa961155] + CEnum v0.5.0 [324d7699] + CategoricalArrays v0.10.8 [af321ab8] + CategoricalDistributions v0.1.15 [082447d4] + ChainRules v1.72.3 [d360d2e6] + ChainRulesCore v1.25.1 [3da002f7] + ColorTypes v0.12.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [ed09eef8] + ComputationalResources v0.3.2 [187b0558] + ConstructionBase v1.5.8 [6add18c4] + ContextVariablesX v0.1.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.118 [ffbed154] + DocStringExtensions v0.9.3 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [587475ba] + Flux v0.14.25 [f6369f11] + ForwardDiff v0.10.38 ⌅ [d9f16b24] + Functors v0.4.12 [0c68f7d7] + GPUArrays v11.2.2 [46192b85] + GPUArraysCore v0.2.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.14 [22cec73e] + InitialValues v0.3.1 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b14d175d] + JuliaVariables v0.2.4 [63c18a36] + KernelAbstractions v0.9.34 [929cbde3] + LLVM v9.2.0 [b964fa9f] + LaTeXStrings v1.4.0 [c52c1a26] + LaplaceRedux v1.2.0 ⌅ [92ad9a40] + LearnAPI v0.1.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [c2834f40] + MLCore v1.0.0 ⌃ [7e8f7934] + MLDataDevices v1.5.3 [a7f614a8] + MLJBase v1.7.0 [e80e1ace] + MLJModelInterface v1.11.0 [d8e11817] + MLStyle v0.4.17 [f1d291b0] + MLUtils v0.4.8 [1914dd2f] + MacroTools v0.5.15 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [872c559c] + NNlib v0.9.29 [77ba4419] + NaNMath v1.1.2 [71a1bf82] + NameResolution v0.1.5 [0b1bfda6] + OneHotArrays v0.2.6 ⌅ [3bd65402] + Optimisers v0.3.4 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.32 [d96e819e] + Parameters v0.12.3 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v2.4.0 [33c8b6b6] + ProgressLogging v0.1.4 [92933f4c] + ProgressMeter v1.10.2 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [321657f4] + ScientificTypes v3.1.0 [30f210dd] + ScientificTypesBase v3.0.0 [7e506255] + ScopedValues v1.3.0 [efcf1570] + Setfield v1.1.2 [605ecd9f] + ShowCases v0.1.0 [699a6c99] + SimpleTraits v0.9.4 [a2af1166] + SortingAlgorithms v1.2.1 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.5.0 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [c062fc1d] + StatisticalMeasuresBase v0.1.2 [64bff920] + StatisticalTraits v3.4.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 [892a3eda] + StringManipulation v0.4.1 [09ab397b] + StructArrays v0.7.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [28d57a85] + Transducers v0.4.84 [bc48ee85] + Tullio v0.3.8 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.0 ⌅ [e88e6eb3] + Zygote v0.6.75 [700de1a5] + ZygoteRules v0.2.7 [dad2f222] + LLVMExtra_jll v0.0.35+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [dc6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.2.0+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.8.0+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+1 [14a3606d] + MozillaCACerts_jll v2024.11.26 [4536629a] + OpenBLAS_jll v0.3.28+3 [05823500] + OpenLibm_jll v0.8.1+3 [bea87d4a] + SuiteSparse_jll v7.8.0+1 [83775a58] + Zlib_jll v1.3.1+1 [8e850b90] + libblastrampoline_jll v5.11.2+0 [8e850ede] + nghttp2_jll v1.63.0+1 [3f19e933] + p7zip_jll v17.5.0+1 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 5.77s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 42.27s ################################################################################ # Testing # Testing LaplaceRedux Status `/tmp/jl_mtqDOo/Project.toml` [4c88cf16] Aqua v0.8.11 [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.7.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.118 ⌅ [587475ba] Flux v0.14.25 [682c06a0] JSON v0.21.4 [c52c1a26] LaplaceRedux v1.2.0 [a7f614a8] MLJBase v1.7.0 [e80e1ace] MLJModelInterface v1.11.0 [72560011] MLJTestInterface v0.2.8 [f1d291b0] MLUtils v0.4.8 [91a5bcdd] Plots v1.40.11 [860ef19b] StableRNGs v1.0.2 ⌃ [a19d573c] StatisticalMeasures v0.1.7 [10745b16] Statistics v1.11.1 [9d524318] TaijaData v1.1.5 [592b5752] Trapz v2.0.3 [bc48ee85] Tullio v0.3.8 ⌅ [e88e6eb3] Zygote v0.6.75 [37e2e46d] LinearAlgebra v1.11.0 [9a3f8284] Random v1.11.0 [9e88b42a] Serialization v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_mtqDOo/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Training networks. Running workflows. [ Info: Running workflow for: (regression, 0, GGN, all) [ Info: Running workflow for: (regression, 0, EmpiricalFisher, all) [ Info: Running workflow for: (regression, 32, GGN, all) [ Info: Running workflow for: (regression, 32, EmpiricalFisher, all) [ Info: Running workflow for: (regression, 0, GGN, last_layer) [ Info: Running workflow for: (regression, 0, EmpiricalFisher, last_layer) [ Info: Running workflow for: (regression, 32, GGN, last_layer) [ Info: Running workflow for: (regression, 32, EmpiricalFisher, last_layer) [ Info: Running workflow for: (regression, 0, GGN, subnetwork) [ Info: Running workflow for: (regression, 0, EmpiricalFisher, subnetwork) [ Info: Running workflow for: (regression, 32, GGN, subnetwork) [ Info: Running workflow for: (regression, 32, EmpiricalFisher, subnetwork) [ Info: Running workflow for: (classification_multi, 0, GGN, all) [ Info: Running workflow for: (classification_multi, 0, EmpiricalFisher, all) [ Info: Running workflow for: (classification_multi, 32, GGN, all) [ Info: Running workflow for: (classification_multi, 32, EmpiricalFisher, all) [ Info: Running workflow for: (classification_multi, 0, GGN, last_layer) [ Info: Running workflow for: (classification_multi, 0, EmpiricalFisher, last_layer) [ Info: Running workflow for: (classification_multi, 32, GGN, last_layer) [ Info: Running workflow for: (classification_multi, 32, EmpiricalFisher, last_layer) [ Info: Running workflow for: (classification_multi, 0, GGN, subnetwork) [ Info: Running workflow for: (classification_multi, 0, EmpiricalFisher, subnetwork) [ Info: Running workflow for: (classification_multi, 32, GGN, subnetwork) [ Info: Running workflow for: (classification_multi, 32, EmpiricalFisher, subnetwork) [ Info: Running workflow for: (classification_binary, 0, GGN, all) [ Info: Running workflow for: (classification_binary, 0, EmpiricalFisher, all) [ Info: Running workflow for: (classification_binary, 32, GGN, all) [ Info: Running workflow for: (classification_binary, 32, EmpiricalFisher, all) [ Info: Running workflow for: (classification_binary, 0, GGN, last_layer) [ Info: Running workflow for: (classification_binary, 0, EmpiricalFisher, last_layer) [ Info: Running workflow for: (classification_binary, 32, GGN, last_layer) [ Info: Running workflow for: (classification_binary, 32, EmpiricalFisher, last_layer) [ Info: Running workflow for: (classification_binary, 0, GGN, subnetwork) [ Info: Running workflow for: (classification_binary, 0, EmpiricalFisher, subnetwork) [ Info: Running workflow for: (classification_binary, 32, GGN, subnetwork) [ Info: Running workflow for: (classification_binary, 32, EmpiricalFisher, subnetwork) [ Info: Running workflow for: (regression, GGN, all) [ Info: Running workflow for: (classification_multi, GGN, all) [ Info: Running workflow for: (classification_binary, GGN, all) [ Info: Running workflow for: (regression, EmpiricalFisher, all) [ Info: Running workflow for: (classification_multi, EmpiricalFisher, all) [ Info: Running workflow for: (classification_binary, EmpiricalFisher, all) [ Info: Running workflow for: (regression, GGN, last_layer) [ Info: Running workflow for: (classification_multi, GGN, last_layer) [ Info: Running workflow for: (classification_binary, GGN, last_layer) [ Info: Running workflow for: (regression, EmpiricalFisher, last_layer) [ Info: Running workflow for: (classification_multi, EmpiricalFisher, last_layer) [ Info: Running workflow for: (classification_binary, EmpiricalFisher, last_layer) [ Info: Running workflow for: (regression, GGN, subnetwork) [ Info: Running workflow for: (classification_multi, GGN, subnetwork) [ Info: Running workflow for: (classification_binary, GGN, subnetwork) [ Info: Running workflow for: (regression, EmpiricalFisher, subnetwork) [ Info: Running workflow for: (classification_multi, EmpiricalFisher, subnetwork) [ Info: Running workflow for: (classification_binary, EmpiricalFisher, subnetwork) [ Info: testing sharpness_regression with distributions [ Info: testing empirical_frequency_regression with distributions [ Info: testing sharpness_classification with distributions [ Info: testing empirical_frequency_classification with distributions [ Info: testing sigma scaling technique ┌ Warning: Layer with Float32 parameters got Float64 input. │ The input will be converted, but any earlier layers may be very slow. │ layer = Dense(2 => 3, σ) # 9 parameters │ summary(x) = "2-element Vector{Float64}" └ @ Flux ~/.julia/packages/Flux/vwk6M/src/layers/stateless.jl:59 [ Info: testing interface for LaplaceRegressor The number of epochs inserted is lower than the number of epochs already been trained. No update is necessary updating only the laplace optimization part [ Info: Training machine(LaplaceRegressor(model = nothing, …), …). ┌ Warning: Warning: no Flux model has been provided in the model. LaplaceRedux will use a standard MLP with 2 hidden layers with 20 neurons each and input and output layers compatible with the dataset. └ @ LaplaceRedux ~/.julia/packages/LaplaceRedux/1bSKz/src/direct_mlj.jl:161 [ Info: Iteration 10: P₀=0.9507453084404416, σ=0.8636653304276862 loss(exp.(logP₀), exp.(logσ)) = 233.40690780558415 Log likelihood: -156.05340160252587 Log det ratio: 108.83697058451439 Scatter: 45.87004182160217 [ Info: Iteration 20: P₀=0.9721926561094985, σ=0.7790970828720825 loss(exp.(logP₀), exp.(logσ)) = 233.28016161005317 Log likelihood: -155.95247149864338 Log det ratio: 107.7505810105595 Scatter: 46.90479921226008 [ Info: Iteration 30: P₀=0.9922137321973001, σ=0.8273680251190529 loss(exp.(logP₀), exp.(logσ)) = 233.00325739338967 Log likelihood: -155.68566099498798 Log det ratio: 106.76444866816252 Scatter: 47.87074412864087 [ Info: Iteration 40: P₀=0.9993406246897789, σ=0.8268184239264026 loss(exp.(logP₀), exp.(logσ)) = 233.0006286543592 Log likelihood: -155.68348102290275 Log det ratio: 106.41970420304253 Scatter: 48.214591059870344 [ Info: Iteration 50: P₀=0.999644140149176, σ=0.8098835212052352 loss(exp.(logP₀), exp.(logσ)) = 232.9886633684639 Log likelihood: -155.67149895488043 Log det ratio: 106.40509423795967 Scatter: 48.22923458920724 [ Info: Iteration 60: P₀=0.9982600458283402, σ=0.8124845879347848 loss(exp.(logP₀), exp.(logσ)) = 232.9832879441371 Log likelihood: -155.66617636477213 Log det ratio: 106.47176614267312 Scatter: 48.16245701605683 [ Info: Iteration 70: P₀=0.9969939164551215, σ=0.8175487640580326 loss(exp.(logP₀), exp.(logσ)) = 232.98052866736967 Log likelihood: -155.66341216232033 Log det ratio: 106.53286218272508 Scatter: 48.101370827373586 [ Info: Iteration 80: P₀=0.9965056549647198, σ=0.8183007492401478 loss(exp.(logP₀), exp.(logσ)) = 232.9809752702102 Log likelihood: -155.6638432380804 Log det ratio: 106.55645009778846 Scatter: 48.07781396647112 [ Info: Iteration 90: P₀=0.9969409861237789, σ=0.8173360017662478 loss(exp.(logP₀), exp.(logσ)) = 232.9804471215338 Log likelihood: -155.6633293002002 Log det ratio: 106.5354185134195 Scatter: 48.09881712924775 [ Info: Iteration 100: P₀=0.9977454597544558, σ=0.8165890408476854 loss(exp.(logP₀), exp.(logσ)) = 232.98028287235263 Log likelihood: -155.66317543783478 Log det ratio: 106.49658478035929 Scatter: 48.13763008867645 [ Info: Updating machine(LaplaceRegressor(model = Chain(Dense(4 => 20, relu), Dense(20 => 20, relu), Dense(20 => 20, relu), Dense(20 => 1)), …), …). Epoch 100: Loss: 62.0977430646542 [ Info: Iteration 10: P₀=1.1069679211794654, σ=0.6347385111101538 loss(exp.(logP₀), exp.(logσ)) = 306.9223936474177 Log likelihood: -136.26169387044024 Log det ratio: 265.9548055599002 Scatter: 75.36659399405484 [ Info: Iteration 20: P₀=1.2164694100485116, σ=0.7405266408439823 loss(exp.(logP₀), exp.(logσ)) = 306.1974226512235 Log likelihood: -135.61240791100587 Log det ratio: 258.34815688666765 Scatter: 82.82187259376772 [ Info: Iteration 30: P₀=1.196296975030748, σ=0.6726830135383639 loss(exp.(logP₀), exp.(logσ)) = 305.84053380990144 Log likelihood: -135.27157689515107 Log det ratio: 259.6894574755057 Scatter: 81.44845635399507 [ Info: Iteration 40: P₀=1.1656040639376481, σ=0.7066466931015057 loss(exp.(logP₀), exp.(logσ)) = 305.7292783955371 Log likelihood: -135.15966836841218 Log det ratio: 261.78045403778924 Scatter: 79.35876601646066 [ Info: Iteration 50: P₀=1.1742203891370186, σ=0.6938364708856879 loss(exp.(logP₀), exp.(logσ)) = 305.69406139219325 Log likelihood: -135.12776724917612 Log det ratio: 261.18719001890304 Scatter: 79.9453982671313 [ Info: Iteration 60: P₀=1.1839472472751473, σ=0.6921753821982651 loss(exp.(logP₀), exp.(logσ)) = 305.69540813134165 Log likelihood: -135.12989769153904 Log det ratio: 260.5233810478286 Scatter: 80.60763983177668 [ Info: Iteration 70: P₀=1.1853396498858086, σ=0.6996909491941182 loss(exp.(logP₀), exp.(logσ)) = 305.6975720877396 Log likelihood: -135.13191999505273 Log det ratio: 260.428864278341 Scatter: 80.70243990703281 [ Info: Iteration 80: P₀=1.183810872968514, σ=0.6930200179518355 loss(exp.(logP₀), exp.(logσ)) = 305.6941286580219 Log likelihood: -135.12862869299246 Log det ratio: 260.53264498070985 Scatter: 80.5983549493491 [ Info: Iteration 90: P₀=1.1825268343275124, σ=0.6954531885812366 loss(exp.(logP₀), exp.(logσ)) = 305.6925435931137 Log likelihood: -135.12711247012157 Log det ratio: 260.61992953993376 Scatter: 80.51093270605053 [ Info: Iteration 100: P₀=1.1819153281202348, σ=0.6963019635669977 loss(exp.(logP₀), exp.(logσ)) = 305.6927407371653 Log likelihood: -135.12732344801364 Log det ratio: 260.6615355448887 Scatter: 80.46929903341471 ┌ Warning: Warning: no Flux model has been provided in the model. LaplaceRedux will use a standard MLP with 2 hidden layers with 20 neurons each and input and output layers compatible with the dataset. └ @ LaplaceRedux ~/.julia/packages/LaplaceRedux/1bSKz/src/direct_mlj.jl:161 [ Info: testing interface for LaplaceClassifier The number of epochs inserted is lower than the number of epochs already been trained. No update is necessary updating only the laplace optimization part Test Summary: | Pass Total Time LaplaceRedux.jl | 143 143 31m54.4s Testing LaplaceRedux tests passed Testing completed after 1947.07s PkgEval succeeded after 2026.1s