Package evaluation of Lale on Julia 1.12.0-DEV.1805 (a080deafdd*) started at 2025-03-24T19:16:07.998 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.76s ################################################################################ # Installation # Installing Lale... Resolving package versions... Installed Conda ── v1.10.2 Installed Lale ─── v0.1.9 Installed PyCall ─ v1.96.4 Updating `~/.julia/environments/v1.12/Project.toml` [25676c37] + Lale v0.1.9 Updating `~/.julia/environments/v1.12/Manifest.toml` [e3c3008a] + AMLPipelineBase v0.1.18 [1520ce14] + AbstractTrees v0.4.5 [66dad0bd] + AliasTables v1.1.3 [336ed68f] + CSV v0.10.15 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.16.0 [8f4d0f93] + Conda v1.10.2 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [e7dc6d0d] + DataValues v0.4.13 [7806a523] + DecisionTree v0.12.4 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.3 [48062228] + FilePathsBase v0.9.24 [842dd82b] + InlineStrings v1.4.3 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [25676c37] + Lale v0.1.9 [50d2b5c4] + Lazy v0.15.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [f0e99cf1] + MLBase v0.9.2 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.0 [eadc2687] + Pandas v1.6.1 [69de0a69] + Parsers v2.8.1 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [438e738f] + PyCall v1.96.4 [189a3867] + Reexport v1.2.2 [6e75b9c4] + ScikitLearnBase v0.5.0 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [382cd787] + TableTraitsUtils v1.0.2 [bd369af6] + Tables v1.12.0 [3bb67fe8] + TranscodingStreams v0.11.3 [81def892] + VersionParsing v1.3.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [dc6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.2.0+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.8.0+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+1 [14a3606d] + MozillaCACerts_jll v2024.11.26 [4536629a] + OpenBLAS_jll v0.3.28+3 [bea87d4a] + SuiteSparse_jll v7.8.0+1 [83775a58] + Zlib_jll v1.3.1+1 [8e850b90] + libblastrampoline_jll v5.11.2+0 [8e850ede] + nghttp2_jll v1.63.0+1 [3f19e933] + p7zip_jll v17.5.0+1 Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building Lale ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/2c5ab4907cb5e76a1eb2c31312dd3e21ebc9ce81/build.log` Installation completed after 107.4s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 109.47s ################################################################################ # Testing # Testing Lale Status `/tmp/jl_dtyJFP/Project.toml` [e3c3008a] AMLPipelineBase v0.1.18 [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.7.0 [25676c37] Lale v0.1.9 [eadc2687] Pandas v1.6.1 [438e738f] PyCall v1.96.4 [10745b16] Statistics v1.11.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_dtyJFP/Manifest.toml` [e3c3008a] AMLPipelineBase v0.1.18 [1520ce14] AbstractTrees v0.4.5 [66dad0bd] AliasTables v1.1.3 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.16.0 [8f4d0f93] Conda v1.10.2 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [e7dc6d0d] DataValues v0.4.13 [7806a523] DecisionTree v0.12.4 [8bb1440f] DelimitedFiles v1.9.1 [ffbed154] DocStringExtensions v0.9.3 [48062228] FilePathsBase v0.9.24 [842dd82b] InlineStrings v1.4.3 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [25676c37] Lale v0.1.9 [50d2b5c4] Lazy v0.15.1 [2ab3a3ac] LogExpFunctions v0.3.29 [f0e99cf1] MLBase v0.9.2 [1914dd2f] MacroTools v0.5.15 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.0 [eadc2687] Pandas v1.6.1 [69de0a69] Parsers v2.8.1 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [43287f4e] PtrArrays v1.3.0 [438e738f] PyCall v1.96.4 [189a3867] Reexport v1.2.2 [6e75b9c4] ScikitLearnBase v0.5.0 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [382cd787] TableTraitsUtils v1.0.2 [bd369af6] Tables v1.12.0 [3bb67fe8] TranscodingStreams v0.11.3 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [dc6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.2.0+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.8.0+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+1 [14a3606d] MozillaCACerts_jll v2024.11.26 [4536629a] OpenBLAS_jll v0.3.28+3 [bea87d4a] SuiteSparse_jll v7.8.0+1 [83775a58] Zlib_jll v1.3.1+1 [8e850b90] libblastrampoline_jll v5.11.2+0 [8e850ede] nghttp2_jll v1.63.0+1 [3f19e933] p7zip_jll v17.5.0+1 Testing Running tests... [ Info: suppressing PyCall warnings LinearSVC QuadraticDiscriminantAnalysis MLPClassifier RandomForestClassifier lale classifiers: Error During Test at /home/pkgeval/.julia/packages/Lale/o77OV/test/test_sklearn.jl:46 Got exception outside of a @test PyError ($(Expr(:escape, :(ccall(#= /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:43 =# @pysym(:PyObject_Call), PyPtr, (PyPtr, PyPtr, PyPtr), o, pyargsptr, kw))))) AttributeError('`np.string_` was removed in the NumPy 2.0 release. Use `np.bytes_` instead.') File "/home/pkgeval/.local/lib/python3.12/site-packages/lale/operators.py", line 2836, in fit self._validate_hyperparam_data_constraints(X, y) File "/home/pkgeval/.local/lib/python3.12/site-packages/lale/operators.py", line 2826, in _validate_hyperparam_data_constraints data_schema = fold_schema(X, y) ^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.local/lib/python3.12/site-packages/lale/helpers.py", line 248, in fold_schema schema_y = fold_schema_aux(y, n_rows_fold) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.local/lib/python3.12/site-packages/lale/helpers.py", line 228, in fold_schema_aux orig_schema = lale.datasets.data_schemas._to_schema(data) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.local/lib/python3.12/site-packages/lale/datasets/data_schemas.py", line 721, in _to_schema result = _list_tensor_to_schema(obj) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.local/lib/python3.12/site-packages/lale/datasets/data_schemas.py", line 430, in _list_tensor_to_schema result = _shape_and_dtype_to_schema(*shape_and_dtype) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.local/lib/python3.12/site-packages/lale/datasets/data_schemas.py", line 387, in _shape_and_dtype_to_schema result = _dtype_to_schema(dtype) ^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.local/lib/python3.12/site-packages/lale/datasets/data_schemas.py", line 363, in _dtype_to_schema elif issubdtype(typ, np.string_) or issubdtype(typ, np.unicode_): ^^^^^^^^^^ File "/home/pkgeval/.local/lib/python3.12/site-packages/numpy/__init__.py", line 400, in __getattr__ raise AttributeError( Stacktrace: [1] pyerr_check(msg::String, val::Nothing) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/exception.jl:75 [2] pyerr_check(msg::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/exception.jl:79 [3] _handle_error(msg::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/exception.jl:96 [4] macro expansion @ ~/.julia/packages/PyCall/1gn3u/src/exception.jl:110 [inlined] [5] #__pycall!##0 @ ~/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:43 [inlined] [6] disable_sigint @ ./c.jl:167 [inlined] [7] __pycall! @ ~/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:42 [inlined] [8] _pycall!(ret::PyCall.PyObject, o::PyCall.PyObject, args::Tuple{Matrix{Float64}, Vector{InlineStrings.String15}}, nargs::Int64, kw::Ptr{Nothing}) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:29 [9] _pycall!(ret::PyCall.PyObject, o::PyCall.PyObject, args::Tuple{Matrix{Float64}, Vector{InlineStrings.String15}}, kwargs::@Kwargs{}) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:11 [10] (::PyCall.PyObject)(::Matrix{Float64}, ::Vararg{Any}; kwargs::@Kwargs{}) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:86 [11] fit!(lale::Lale.LaleOps.LaleOp, xx::DataFrames.DataFrame, y::Vector{InlineStrings.String15}) @ Lale.LaleOps ~/.julia/packages/Lale/o77OV/src/laleop.jl:233 [12] fit_test(learner::String, in::DataFrames.DataFrame, out::Vector{InlineStrings.String15}) @ Main.TestLale.TestSkLearn ~/.julia/packages/Lale/o77OV/test/test_sklearn.jl:41 [13] macro expansion @ ~/.julia/packages/Lale/o77OV/test/test_sklearn.jl:50 [inlined] [14] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1724 [inlined] [15] top-level scope @ ~/.julia/packages/Lale/o77OV/test/test_sklearn.jl:47 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:301 [17] top-level scope @ ~/.julia/packages/Lale/o77OV/test/runtests.jl:11 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:301 [19] top-level scope @ none:6 [20] eval(m::Module, e::Any) @ Core ./boot.jl:485 [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:295 [22] _start() @ Base ./client.jl:558 Test Summary: | Pass Error Total Time lale classifiers | 3 1 4 13.7s ERROR: LoadError: Some tests did not pass: 3 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/Lale/o77OV/test/test_sklearn.jl:1 in expression starting at /home/pkgeval/.julia/packages/Lale/o77OV/test/runtests.jl:1 Testing failed after 87.69s ERROR: LoadError: Package Lale errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2359 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2214 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:481 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:159 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:147 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:147 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:146 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:300 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [12] _start() @ Base ./client.jl:558 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 382.04s: package tests unexpectedly errored