Package evaluation of CrystalInfoContainers on Julia 1.12.0-DEV.1805 (a080deafdd*) started at 2025-03-24T15:40:35.317 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.76s ################################################################################ # Installation # Installing CrystalInfoContainers... Resolving package versions... Installed CrystalInfoContainers ─ v0.1.0 Updating `~/.julia/environments/v1.12/Project.toml` [0536147b] + CrystalInfoContainers v0.1.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [34da2185] + Compat v4.16.0 [a8cc5b0e] + Crayons v4.1.1 [0536147b] + CrystalInfoContainers v0.1.0 [6007d9b0] + CrystalInfoFramework v0.8.0 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [842dd82b] + InlineStrings v1.4.3 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b964fa9f] + LaTeXStrings v1.4.0 [d42ef402] + Lerche v0.5.6 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.0 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.1 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [5c2747f8] + URIs v1.5.1 ⌅ [a51ab1cf] + ICU_jll v69.1.0+0 [76ed43ae] + SQLite_jll v3.48.0+0 [6fcef0ae] + cif_api_jll v0.4.2+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [dc6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.2.0+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.8.0+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+1 [14a3606d] + MozillaCACerts_jll v2024.11.26 [4536629a] + OpenBLAS_jll v0.3.28+3 [83775a58] + Zlib_jll v1.3.1+1 [8e850b90] + libblastrampoline_jll v5.11.2+0 [8e850ede] + nghttp2_jll v1.63.0+1 [3f19e933] + p7zip_jll v17.5.0+1 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 3.03s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 119.0s ################################################################################ # Testing # Testing CrystalInfoContainers Status `/tmp/jl_KYxiWw/Project.toml` [0536147b] CrystalInfoContainers v0.1.0 [6007d9b0] CrystalInfoFramework v0.8.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_KYxiWw/Manifest.toml` [34da2185] Compat v4.16.0 [a8cc5b0e] Crayons v4.1.1 [0536147b] CrystalInfoContainers v0.1.0 [6007d9b0] CrystalInfoFramework v0.8.0 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [842dd82b] InlineStrings v1.4.3 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [b964fa9f] LaTeXStrings v1.4.0 [d42ef402] Lerche v0.5.6 [1914dd2f] MacroTools v0.5.15 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.0 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [189a3867] Reexport v1.2.2 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.1 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [5c2747f8] URIs v1.5.1 ⌅ [a51ab1cf] ICU_jll v69.1.0+0 [76ed43ae] SQLite_jll v3.48.0+0 [6fcef0ae] cif_api_jll v0.4.2+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [dc6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.2.0+0 [deac9b47] LibCURL_jll v8.6.0+0 [e37daf67] LibGit2_jll v1.8.0+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.6+1 [14a3606d] MozillaCACerts_jll v2024.11.26 [4536629a] OpenBLAS_jll v0.3.28+3 [83775a58] Zlib_jll v1.3.1+1 [8e850b90] libblastrampoline_jll v5.11.2+0 [8e850ede] nghttp2_jll v1.63.0+1 [3f19e933] p7zip_jll v17.5.0+1 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Test simple dict as DataSource | 6 6 3.2s Test 1: q is C Test 3: ["O", "C", "H"] Test Summary: | Pass Total Time Test CIF block as DataSource | 4 4 14.9s cif_img.dic _diffrn_scan.date_end Testing definition _diffrn_radiation.inhomogeneity float _diffrn_radiation.inhomogeneity Block{Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T}("_item.name" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T["_diffrn_radiation.inhomogeneity"], "_item_aliases.version" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T["2.0.1"], "_item_description.description" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T[" Half-width in millimetres of the incident beam in the\n direction perpendicular to the diffraction plane."], "_item_range.minimum" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T["0.0", "0.0"], "_item_type.code" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T["float"], "_item.category_id" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T["diffrn_radiation"], "_item_units.code" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T["millimetres"], "_item_aliases.dictionary" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T["cif_core.dic"], "_item.mandatory_code" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T["no"], "_item_range.maximum" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T[nothing, "0.0"], "_item_aliases.alias_name" => Union{Missing, Nothing, Dict{String, T}, Vector{T}, String} where T["_diffrn_radiation_inhomogeneity"]) Test Summary: | Pass Total Time Test multi data block as DataSource | 4 4 8.8s ┌ Warning: `delete!(df::DataFrame, inds)` is deprecated, use `deleteat!(df::DataFrame, inds)` instead. │ caller = resolve_templated_imports!(d::Dict{Symbol, DataFrames.DataFrame}, original_dir::String, cached_dicts::Dict{Any, Any}) at ddlm_dictionary_ng.jl:1528 └ @ Core ~/.julia/packages/CrystalInfoFramework/Mk0lT/src/ddlm_dictionary_ng.jl:1528 Getting all linked values for _atom_site.fract_x -> _atom_site.label) Getting all linked values for _atom_site.fract_x -> _atom_site.label) Test Summary: | Pass Total Time Test TypedDataSources | 9 9 2m12.4s ┌ Warning: Must create key data name for cell └ @ CrystalInfoContainers ~/.julia/packages/CrystalInfoContainers/2lVTF/src/Relations.jl:271 ┌ Warning: Must create key data name for cell └ @ CrystalInfoContainers ~/.julia/packages/CrystalInfoContainers/2lVTF/src/Relations.jl:271 Test Summary: | Pass Total Time Test construction of RelationalContainers from Datasources and dictionaries | 7 7 1m24.4s Test Summary: | Pass Total Time Test construction of a CifCategory | 5 5 1m17.9s Test Summary: | Pass Total Time Test child categories | 1 1 1m16.7s Test Summary: | Pass Total Time Test behaviour of plain CatPackets | 11 11 1m15.8s ┌ Warning: Must create key data name for atom_site └ @ CrystalInfoContainers ~/.julia/packages/CrystalInfoContainers/2lVTF/src/Relations.jl:271 Test Summary: | Pass Total Time Test namespace operations | 9 9 1m24.7s Testing CrystalInfoContainers tests passed Testing completed after 578.84s PkgEval succeeded after 720.76s