Package evaluation of SurfaceReactions on Julia 1.12.0-rc1 (228edd6610*) started at 2025-07-15T03:28:24.437 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.49s ################################################################################ # Installation # Installing SurfaceReactions... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [59f5dcf9] + SurfaceReactions v0.1.6 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.15.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [a95523ee] + AlmostBlockDiagonals v0.1.10 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.19.0 [4c555306] + ArrayLayouts v1.11.1 [aae01518] + BandedMatrices v1.9.4 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [764a87c0] + BoundaryValueDiffEq v5.18.0 [7227322d] + BoundaryValueDiffEqAscher v1.8.0 [56b672f2] + BoundaryValueDiffEqCore v1.11.0 [85d9eb09] + BoundaryValueDiffEqFIRK v1.9.0 [1a22d4ce] + BoundaryValueDiffEqMIRK v1.9.0 [9255f1d6] + BoundaryValueDiffEqMIRKN v1.8.0 [ed55bfe0] + BoundaryValueDiffEqShooting v1.9.0 [70df07ce] + BracketingNonlinearSolve v1.3.0 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 [d360d2e6] + ChainRulesCore v1.25.2 [fb6a15b2] + CloseOpenIntervals v0.1.13 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.17.0 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [bcd4f6db] + DelayDiffEq v5.53.1 [2b5f629d] + DiffEqBase v6.177.2 [459566f4] + DiffEqCallbacks v4.8.0 [77a26b50] + DiffEqNoiseProcess v5.24.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [0c46a032] + DifferentialEquations v7.16.1 [a0c0ee7d] + DifferentiationInterface v0.7.2 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.12 [d4d017d3] + ExponentialUtilities v1.27.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [9d29842c] + FastAlmostBandedMatrices v0.1.5 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.0.2 [a4df4552] + FastPower v1.1.3 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [f6369f11] + ForwardDiff v1.0.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [c145ed77] + GenericSchur v0.5.5 [86223c79] + Graphs v1.13.0 [34004b35] + HypergeometricFunctions v0.3.28 [7aa10a8e] + IdealGas v0.1.9 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [ae98c720] + Jieko v0.2.1 [ccbc3e58] + JumpProcesses v9.16.1 [ba0b0d4f] + Krylov v0.10.1 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [5078a376] + LazyArrays v2.6.1 [2d8b4e74] + LevyArea v1.0.0 [9c8b4983] + LightXML v0.9.2 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.4.0 [7ed4a6bd] + LinearSolve v3.18.2 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [a3b82374] + MatrixFactorizations v3.0.1 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [d41bc354] + NLSolversBase v7.10.0 [2774e3e8] + NLsolve v4.5.1 [77ba4419] + NaNMath v1.1.3 [8913a72c] + NonlinearSolve v4.9.0 [be0214bd] + NonlinearSolveBase v1.12.0 [5959db7a] + NonlinearSolveFirstOrder v1.5.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.6.0 [26075421] + NonlinearSolveSpectralMethods v1.2.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [1dea7af3] + OrdinaryDiffEq v6.98.0 [89bda076] + OrdinaryDiffEqAdamsBashforthMoulton v1.2.0 [6ad6398a] + OrdinaryDiffEqBDF v1.6.0 [bbf590c4] + OrdinaryDiffEqCore v1.26.2 [50262376] + OrdinaryDiffEqDefault v1.5.0 [4302a76b] + OrdinaryDiffEqDifferentiation v1.10.0 [9286f039] + OrdinaryDiffEqExplicitRK v1.1.0 [e0540318] + OrdinaryDiffEqExponentialRK v1.4.0 [becaefa8] + OrdinaryDiffEqExtrapolation v1.5.0 [5960d6e9] + OrdinaryDiffEqFIRK v1.12.0 [101fe9f7] + OrdinaryDiffEqFeagin v1.1.0 [d3585ca7] + OrdinaryDiffEqFunctionMap v1.1.1 [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.1.0 [9f002381] + OrdinaryDiffEqIMEXMultistep v1.3.0 [521117fe] + OrdinaryDiffEqLinear v1.3.0 [1344f307] + OrdinaryDiffEqLowOrderRK v1.2.0 [b0944070] + OrdinaryDiffEqLowStorageRK v1.3.0 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.10.0 [c9986a66] + OrdinaryDiffEqNordsieck v1.1.0 [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.3.1 [5b33eab2] + OrdinaryDiffEqPRK v1.1.0 [04162be5] + OrdinaryDiffEqQPRK v1.1.0 [af6ede74] + OrdinaryDiffEqRKN v1.1.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.11.0 [2d112036] + OrdinaryDiffEqSDIRK v1.3.0 [669c94d9] + OrdinaryDiffEqSSPRK v1.3.0 [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.3.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.1.0 [fa646aed] + OrdinaryDiffEqSymplecticRK v1.3.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.1.0 [79d7bb75] + OrdinaryDiffEqVerner v1.2.0 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.5 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [85a6dd25] + PositiveFactorizations v0.2.4 [d236fae5] + PreallocationTools v0.4.28 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [3fc4dfc6] + ReactionCommons v0.2.2 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.34.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.1.1 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [58b8660e] + RxnHelperUtils v1.0.3 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.103.0 [19f34311] + SciMLJacobianOperators v0.1.6 [c0aeaf25] + SciMLOperators v1.3.1 [53ae85a6] + SciMLStructures v1.7.0 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.5.0 [699a6c99] + SimpleTraits v0.9.4 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.1 [9f842d2f] + SparseConnectivityTracer v0.6.21 [0a514795] + SparseMatrixColorings v0.4.21 [276daf66] + SpecialFunctions v2.5.1 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [9672c7b4] + SteadyStateDiffEq v2.5.0 [789caeaf] + StochasticDiffEq v6.80.0 [7792a7ef] + StrideArraysCore v0.5.7 [892a3eda] + StringManipulation v0.4.1 [c3572dad] + Sundials v4.28.0 [59f5dcf9] + SurfaceReactions v0.1.6 [2efcf032] + SymbolicIndexingInterface v0.3.41 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.0.1+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [fb77eaff] + Sundials_jll v5.2.3+0 [02c8fc9c] + XML2_jll v2.14.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.35s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 1839.76s ################################################################################ # Testing # Testing SurfaceReactions Status `/tmp/jl_j993zB/Project.toml` [0c46a032] DifferentialEquations v7.16.1 [7aa10a8e] IdealGas v0.1.9 [9c8b4983] LightXML v0.9.2 [3fc4dfc6] ReactionCommons v0.2.2 [58b8660e] RxnHelperUtils v1.0.3 [59f5dcf9] SurfaceReactions v0.1.6 [8dfed614] Test v1.11.0 Status `/tmp/jl_j993zB/Manifest.toml` [47edcb42] ADTypes v1.15.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [a95523ee] AlmostBlockDiagonals v0.1.10 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.19.0 [4c555306] ArrayLayouts v1.11.1 [aae01518] BandedMatrices v1.9.4 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [764a87c0] BoundaryValueDiffEq v5.18.0 [7227322d] BoundaryValueDiffEqAscher v1.8.0 [56b672f2] BoundaryValueDiffEqCore v1.11.0 [85d9eb09] BoundaryValueDiffEqFIRK v1.9.0 [1a22d4ce] BoundaryValueDiffEqMIRK v1.9.0 [9255f1d6] BoundaryValueDiffEqMIRKN v1.8.0 [ed55bfe0] BoundaryValueDiffEqShooting v1.9.0 [70df07ce] BracketingNonlinearSolve v1.3.0 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.6 [d360d2e6] ChainRulesCore v1.25.2 [fb6a15b2] CloseOpenIntervals v0.1.13 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.17.0 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [bcd4f6db] DelayDiffEq v5.53.1 [2b5f629d] DiffEqBase v6.177.2 [459566f4] DiffEqCallbacks v4.8.0 [77a26b50] DiffEqNoiseProcess v5.24.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [0c46a032] DifferentialEquations v7.16.1 [a0c0ee7d] DifferentiationInterface v0.7.2 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.12 [d4d017d3] ExponentialUtilities v1.27.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [9d29842c] FastAlmostBandedMatrices v0.1.5 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.0.2 [a4df4552] FastPower v1.1.3 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [f6369f11] ForwardDiff v1.0.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [c145ed77] GenericSchur v0.5.5 [86223c79] Graphs v1.13.0 [34004b35] HypergeometricFunctions v0.3.28 [7aa10a8e] IdealGas v0.1.9 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [ae98c720] Jieko v0.2.1 [ccbc3e58] JumpProcesses v9.16.1 [ba0b0d4f] Krylov v0.10.1 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [5078a376] LazyArrays v2.6.1 [2d8b4e74] LevyArea v1.0.0 [9c8b4983] LightXML v0.9.2 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.4.0 [7ed4a6bd] LinearSolve v3.18.2 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [a3b82374] MatrixFactorizations v3.0.1 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 [d41bc354] NLSolversBase v7.10.0 [2774e3e8] NLsolve v4.5.1 [77ba4419] NaNMath v1.1.3 [8913a72c] NonlinearSolve v4.9.0 [be0214bd] NonlinearSolveBase v1.12.0 [5959db7a] NonlinearSolveFirstOrder v1.5.0 [9a2c21bd] NonlinearSolveQuasiNewton v1.6.0 [26075421] NonlinearSolveSpectralMethods v1.2.0 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 [1dea7af3] OrdinaryDiffEq v6.98.0 [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.2.0 [6ad6398a] OrdinaryDiffEqBDF v1.6.0 [bbf590c4] OrdinaryDiffEqCore v1.26.2 [50262376] OrdinaryDiffEqDefault v1.5.0 [4302a76b] OrdinaryDiffEqDifferentiation v1.10.0 [9286f039] OrdinaryDiffEqExplicitRK v1.1.0 [e0540318] OrdinaryDiffEqExponentialRK v1.4.0 [becaefa8] OrdinaryDiffEqExtrapolation v1.5.0 [5960d6e9] OrdinaryDiffEqFIRK v1.12.0 [101fe9f7] OrdinaryDiffEqFeagin v1.1.0 [d3585ca7] OrdinaryDiffEqFunctionMap v1.1.1 [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.1.0 [9f002381] OrdinaryDiffEqIMEXMultistep v1.3.0 [521117fe] OrdinaryDiffEqLinear v1.3.0 [1344f307] OrdinaryDiffEqLowOrderRK v1.2.0 [b0944070] OrdinaryDiffEqLowStorageRK v1.3.0 [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.10.0 [c9986a66] OrdinaryDiffEqNordsieck v1.1.0 [5dd0a6cf] OrdinaryDiffEqPDIRK v1.3.1 [5b33eab2] OrdinaryDiffEqPRK v1.1.0 [04162be5] OrdinaryDiffEqQPRK v1.1.0 [af6ede74] OrdinaryDiffEqRKN v1.1.0 [43230ef6] OrdinaryDiffEqRosenbrock v1.11.0 [2d112036] OrdinaryDiffEqSDIRK v1.3.0 [669c94d9] OrdinaryDiffEqSSPRK v1.3.0 [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.3.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.1.0 [fa646aed] OrdinaryDiffEqSymplecticRK v1.3.0 [b1df2697] OrdinaryDiffEqTsit5 v1.1.0 [79d7bb75] OrdinaryDiffEqVerner v1.2.0 [90014a1f] PDMats v0.11.35 [d96e819e] Parameters v0.12.3 [e409e4f3] PoissonRandom v0.4.5 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [85a6dd25] PositiveFactorizations v0.2.4 [d236fae5] PreallocationTools v0.4.28 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [3fc4dfc6] ReactionCommons v0.2.2 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.34.1 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [ae5879a3] ResettableStacks v1.1.1 [79098fc4] Rmath v0.8.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.15 [58b8660e] RxnHelperUtils v1.0.3 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.103.0 [19f34311] SciMLJacobianOperators v0.1.6 [c0aeaf25] SciMLOperators v1.3.1 [53ae85a6] SciMLStructures v1.7.0 [efcf1570] Setfield v1.1.2 [727e6d20] SimpleNonlinearSolve v2.5.0 [699a6c99] SimpleTraits v0.9.4 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.1 [9f842d2f] SparseConnectivityTracer v0.6.21 [0a514795] SparseMatrixColorings v0.4.21 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [9672c7b4] SteadyStateDiffEq v2.5.0 [789caeaf] StochasticDiffEq v6.80.0 [7792a7ef] StrideArraysCore v0.5.7 [892a3eda] StringManipulation v0.4.1 [c3572dad] Sundials v4.28.0 [59f5dcf9] SurfaceReactions v0.1.6 [2efcf032] SymbolicIndexingInterface v0.3.41 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [781d530d] TruncatedStacktraces v1.4.0 [3a884ed6] UnPack v1.0.2 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.0.1+1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 ⌅ [fb77eaff] Sundials_jll v5.2.3+0 [02c8fc9c] XML2_jll v2.14.1+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... Info Given SurfaceReactions was explicitly requested, output will be shown live   ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 383 running 1 of 1  signal (10): User defined signal 1 obviously_egal at /source/src/subtype.c:399 obviously_in_union at /source/src/subtype.c:538 obviously_in_union at /source/src/subtype.c:534 obviously_in_union at /source/src/subtype.c:534 obviously_in_union at /source/src/subtype.c:534 subtype at /source/src/subtype.c:1416 exists_subtype at /source/src/subtype.c:1791 [inlined] forall_exists_subtype at /source/src/subtype.c:1820 ijl_subtype_env at /source/src/subtype.c:2279 local_forall_exists_subtype at /source/src/subtype.c:1628 subtype_ccheck at /source/src/subtype.c:698 equal_var at /source/src/subtype.c:1718 forall_exists_equal at /source/src/subtype.c:1768 subtype at /source/src/subtype.c:1554 subtype_unionall at /source/src/subtype.c:965 subtype at /source/src/subtype.c:1511 exists_subtype at /source/src/subtype.c:1791 [inlined] forall_exists_subtype at /source/src/subtype.c:1820 ijl_subtype_env at /source/src/subtype.c:2279 subtype_tuple_tail at /source/src/subtype.c:1292 [inlined] subtype_tuple at /source/src/subtype.c:1374 [inlined] subtype at /source/src/subtype.c:1548 exists_subtype at /source/src/subtype.c:1791 [inlined] forall_exists_subtype at /source/src/subtype.c:1820 ijl_subtype_env at /source/src/subtype.c:2279 intersect at /source/src/subtype.c:4149 intersect_all at /source/src/subtype.c:4355 jl_type_intersection_env_s at /source/src/subtype.c:4603 jl_typemap_intersection_node_visitor at /source/src/typemap.c:543 jl_typemap_intersection_visitor at /source/src/typemap.c:810 jl_typemap_intersection_memory_visitor at /source/src/typemap.c:500 jl_typemap_intersection_visitor at /source/src/typemap.c:701 ml_mtable_visitor at /source/src/gf.c:4244 [inlined] ml_matches at /source/src/gf.c:4623 ml_matches at /source/src/gf.c:4533 [inlined] ijl_matching_methods at /source/src/gf.c:2913 [inlined] ijl_matching_methods at /source/src/gf.c:2900 _methods_by_ftype at ./runtime_internals.jl:1414 [inlined] verify_call at ./staticdata.jl:337 [inlined] verify_method at ./staticdata.jl:187 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method at ./staticdata.jl:248 verify_method_graph at ./staticdata.jl:68 _insert_backedges at ./staticdata.jl:42 _insert_backedges at ./staticdata.jl:39 [inlined] insert_backedges at ./staticdata.jl:32 [inlined] #_include_from_serialized#863 at ./loading.jl:1285 _include_from_serialized at ./loading.jl:1246 [inlined] #_require_search_from_serialized#879 at ./loading.jl:2070 _require_search_from_serialized at ./loading.jl:1977 jfptr__require_search_from_serialized_89760.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 __require_prelocked at ./loading.jl:2595 _require_prelocked at ./loading.jl:2461 macro expansion at ./loading.jl:2389 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2354 jfptr___require_81934.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:894 require at ./loading.jl:2330 jfptr_require_76958.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] call_require at /source/src/toplevel.c:494 [inlined] eval_import_path at /source/src/toplevel.c:532 jl_toplevel_eval_flex at /source/src/toplevel.c:830 ijl_toplevel_eval at /source/src/toplevel.c:1047 eval_body at /source/src/interpreter.c:655 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_eval_module_expr at /source/src/toplevel.c:197 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:814 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 _include at ./loading.jl:2897 include at ./Base.jl:303 include_package_for_output at ./loading.jl:2991 jfptr_include_package_for_output_104662.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 include_string at ./loading.jl:2847 [inlined] exec_options at ./client.jl:319 _start at ./client.jl:554 jfptr__start_99273.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x769c3954e249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================   ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 287 running 0 of 1  signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#399 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 [inlined] success at ./process.jl:556 jfptr_success_50432.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 #compilecache#890 at ./loading.jl:3200 compilecache at ./loading.jl:3156 compilecache at ./loading.jl:3156 unknown function (ip: 0x7e8f378bc343) at (unknown file) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 #__require_prelocked##0 at ./loading.jl:2647 #mkpidlock#8 at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 unknown function (ip: 0x7e8f378bb79d) at (unknown file) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 mkpidlock at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:90 #mkpidlock#7 at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] mkpidlock at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 jfptr_mkpidlock_89340.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] jl_f__apply_iterate at /source/src/builtins.c:862 #trymkpidlock#13 at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] jl_f__apply_iterate at /source/src/builtins.c:862 trymkpidlock at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:112 _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:894 #invokelatest_gr#233 at ./reflection.jl:1282 [inlined] invokelatest_gr at ./reflection.jl:1274 [inlined] #maybe_cachefile_lock#900 at ./loading.jl:3849 jfptr_YY.maybe_cachefile_lockYY.900_82021.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 maybe_cachefile_lock at ./loading.jl:3846 __require_prelocked at ./loading.jl:2633 _require_prelocked at ./loading.jl:2461 _require_prelocked at ./loading.jl:2455 run_extension_callbacks at ./loading.jl:1575 run_extension_callbacks at ./loading.jl:1612 run_package_callbacks at ./loading.jl:1428 _tryrequire_from_serialized at ./loading.jl:1926 _tryrequire_from_serialized at ./loading.jl:1964 __require_prelocked at ./loading.jl:2662 _require_prelocked at ./loading.jl:2461 macro expansion at ./loading.jl:2389 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2354 jfptr___require_81934.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:894 require at ./loading.jl:2330 jfptr_require_76958.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] call_require at /source/src/toplevel.c:494 [inlined] eval_import_path at /source/src/toplevel.c:532 eval_import_from at /source/src/toplevel.c:670 [inlined] eval_import_from at /source/src/toplevel.c:661 jl_toplevel_eval_flex at /source/src/toplevel.c:820 ijl_toplevel_eval at /source/src/toplevel.c:1047 eval_body at /source/src/interpreter.c:655 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_eval_module_expr at /source/src/toplevel.c:197 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:814 jl_toplevel_eval_flex at /source/src/toplevel.c:975 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 _include at ./loading.jl:2897 include at ./Base.jl:303 include_package_for_output at ./loading.jl:2991 jfptr_include_package_for_output_104662.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 include_string at ./loading.jl:2847 [inlined] exec_options at ./client.jl:319 _start at ./client.jl:554 jfptr__start_99273.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e8f388b9249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2756 │ [3] require_stdlib │ @ ./loading.jl:2752 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:330 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:349 └ @ Base Base.jl:340  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 235 running 0 of 1  signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#399 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #633 at ./asyncevent.jl:359 jfptr_YY.633_53970.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2756 │ [3] require_stdlib │ @ ./loading.jl:2752 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:330 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:349 └ @ Base Base.jl:340  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 231 running 0 of 1  signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#399 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #633 at ./asyncevent.jl:359 jfptr_YY.633_53970.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2756 │ [3] require_stdlib │ @ ./loading.jl:2752 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:330 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:349 └ @ Base Base.jl:340 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 227 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#399 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #633 at ./asyncevent.jl:359 jfptr_YY.633_53970.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007d4357134c40 Total snapshots: 444. Utilization: 0% ╎444 @Base/asyncevent.jl:359 (::Base.var"#633#634"{FileWatching.Pidfile.var… ╎ 444 @Base/asyncevent.jl:185 _trywait(t::Timer) ╎ 444 @Base/condition.jl:136 wait ╎ 444 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.S… ╎ 444 @Base/task.jl:1199 wait() 443╎ 444 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronize… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#399 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 jfptr_wait_82598.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2476 unknown function (ip: 0x7e6605186c73) at (unknown file) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 #213 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2416 withenv at ./env.jl:265 #198 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2237 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2087 #194 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2196 #mktempdir#21 at ./file.jl:899 unknown function (ip: 0x7e660517367c) at (unknown file) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 mktempdir at ./file.jl:895 mktempdir at ./file.jl:895 #sandbox#190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2143 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2135 unknown function (ip: 0x7e66051720c9) at (unknown file) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 #test#201 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2401 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2313 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:511 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:490 unknown function (ip: 0x7e6605171d01) at (unknown file) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 unknown function (ip: 0x7e660516f538) at (unknown file) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 unknown function (ip: 0x7e6605166f9f) at (unknown file) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 _include at ./loading.jl:2897 include at ./Base.jl:303 exec_options at ./client.jl:321 _start at ./client.jl:554 jfptr__start_99273.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e660dcb0249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007e65f3200010 Total snapshots: 375. Utilization: 0% ╎375 @Base/client.jl:554 _start() ╎ 375 @Base/client.jl:321 exec_options(opts::Base.JLOptions) ╎ 375 @Base/Base.jl:303 include(mod::Module, _path::String) ╎ 375 @Base/loading.jl:2897 _include(mapexpr::Function, mod::Module, _pat… ╎ 375 @Base/loading.jl:2837 include_string(mapexpr::typeof(identity), mo… ╎ 375 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 375 @Pkg/src/API.jl:151 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ 375 @Pkg/src/API.jl:151 #test#81 ╎ ╎ 375 @Pkg/src/API.jl:152 test ╎ ╎ 375 @Pkg/src/API.jl:152 test(pkgs::Vector{String}; kwargs::Base.P… ╎ ╎ 375 @Pkg/src/API.jl:153 kwcall(::@NamedTuple{julia_args::Cmd}, :… ╎ ╎ ╎ 375 @Pkg/src/API.jl:164 test(pkgs::Vector{PackageSpec}; io::IOC… ╎ ╎ ╎ 375 @Pkg/src/API.jl:490 kwcall(::@NamedTuple{julia_args::Cmd, … ╎ ╎ ╎ 375 @Pkg/src/API.jl:511 test(ctx::Pkg.Types.Context, pkgs::Ve… ╎ ╎ ╎ 375 @Pkg/…erations.jl:2313 test ╎ ╎ ╎ 375 @Pkg/…erations.jl:2401 test(ctx::Pkg.Types.Context, pkg… ╎ ╎ ╎ ╎ 375 @Pkg/…rations.jl:2135 kwcall(::@NamedTuple{preferences… ╎ ╎ ╎ ╎ 375 @Pkg/…rations.jl:2143 #sandbox#190 ╎ ╎ ╎ ╎ 375 @Base/file.jl:895 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 375 @Base/file.jl:895 mktempdir(fn::Function, parent::S… ╎ ╎ ╎ ╎ 375 @Base/file.jl:899 mktempdir(fn::Pkg.Operations.var… ╎ ╎ ╎ ╎ ╎ 375 @Pkg/…tions.jl:2196 (::Pkg.Operations.var"#194#19… ╎ ╎ ╎ ╎ ╎ 375 @Pkg/…tions.jl:2087 with_temp_env(fn::Pkg.Operat… ╎ ╎ ╎ ╎ ╎ 375 @Pkg/…tions.jl:2237 (::Pkg.Operations.var"#198#… ╎ ╎ ╎ ╎ ╎ 375 @Base/env.jl:265 withenv(::Pkg.Operations.var"… ╎ ╎ ╎ ╎ ╎ 375 @Pkg/…ions.jl:2416 (::Pkg.Operations.var"#213… ╎ ╎ ╎ ╎ ╎ ╎ 375 @Pkg/…ons.jl:2476 subprocess_handler(cmd::Cm… ╎ ╎ ╎ ╎ ╎ ╎ 375 @Base/…ss.jl:687 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 375 @Base/…ss.jl:694 wait(x::Base.Process, syn… ╎ ╎ ╎ ╎ ╎ ╎ 375 @Base/…on.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 375 @Base/…on.jl:141 wait(c::Base.GenericCon… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 375 @Base/…sk.jl:1199 wait() 374╎ ╎ ╎ ╎ ╎ ╎ ╎ 375 @Base/…sk.jl:1187 poptask(W::Base.Intr…  [235] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/DifferentialEquations/eQbP8/src/DifferentialEquations.jl:10 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#399 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #633 at ./asyncevent.jl:359 jfptr_YY.633_53970.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 17023692 (Pool: 17023561; Big: 131); GC: 32 [227] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/SurfaceReactions/sYCEu/test/runtests.jl:1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#399 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #633 at ./asyncevent.jl:359 jfptr_YY.633_53970.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 28470816 (Pool: 28470631; Big: 185); GC: 60 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#399 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:329 #start_profile_listener##0 at ./Base.jl:349 jfptr_YY.start_profile_listenerYY.YY.0_53982.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3800 [inlined] ijl_apply_generic at /source/src/gf.c:4000 jl_apply at /source/src/julia.h:2374 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 27099202 (Pool: 27098613; Big: 589); GC: 25 PkgEval terminated after 2765.44s: test duration exceeded the time limit