Package evaluation of SpineBasedRecordLinkage on Julia 1.12.0-rc1.2 (995ff9db19*) started at 2025-07-14T16:09:38.602 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.11s ################################################################################ # Installation # Installing SpineBasedRecordLinkage... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [c1ccfb80] + SpineBasedRecordLinkage v0.4.2 Updating `~/.julia/environments/v1.12/Manifest.toml` ⌅ [336ed68f] + CSV v0.9.11 [324d7699] + CategoricalArrays v0.10.8 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.17.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [48062228] + FilePathsBase v0.9.24 [842dd82b] + InlineStrings v1.4.4 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [b4d66a32] + Schemata v3.0.2 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.1 [c1ccfb80] + SpineBasedRecordLinkage v0.4.2 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [88034a9c] + StringDistances v0.11.3 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [ea10d353] + WeakRefStrings v1.4.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 3.75s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: SpineBasedRecordLinkage Failed to precompile SpineBasedRecordLinkage [c1ccfb80-616c-11e9-2032-47e8246e4458] to "/home/pkgeval/.julia/compiled/v1.12/SpineBasedRecordLinkage/jl_RjHjg2". ERROR: LoadError: InitError: TypeError: in typeassert, expected Tuple{Vector{UInt8}, Int64, Int64, Union{Nothing, String}}, got a value of type Nothing Stacktrace: [1] getsource(x::Any, buffer_in_memory::Bool) @ CSV ~/.julia/packages/CSV/9LsxT/src/utils.jl:295 [2] macro expansion @ ~/.julia/packages/CSV/9LsxT/src/context.jl:324 [inlined] [3] Context @ ./none:0 [inlined] [4] CSV.Context(source::CSV.Arg, header::CSV.Arg, normalizenames::CSV.Arg, datarow::CSV.Arg, skipto::CSV.Arg, footerskip::CSV.Arg, transpose::CSV.Arg, comment::CSV.Arg, ignoreemptyrows::CSV.Arg, ignoreemptylines::CSV.Arg, select::CSV.Arg, drop::CSV.Arg, limit::CSV.Arg, buffer_in_memory::CSV.Arg, threaded::CSV.Arg, ntasks::CSV.Arg, tasks::CSV.Arg, rows_to_check::CSV.Arg, lines_to_check::CSV.Arg, missingstrings::CSV.Arg, missingstring::CSV.Arg, delim::CSV.Arg, ignorerepeated::CSV.Arg, quoted::CSV.Arg, quotechar::CSV.Arg, openquotechar::CSV.Arg, closequotechar::CSV.Arg, escapechar::CSV.Arg, dateformat::CSV.Arg, dateformats::CSV.Arg, decimal::CSV.Arg, truestrings::CSV.Arg, falsestrings::CSV.Arg, type::CSV.Arg, types::CSV.Arg, typemap::CSV.Arg, pool::CSV.Arg, downcast::CSV.Arg, lazystrings::CSV.Arg, stringtype::CSV.Arg, strict::CSV.Arg, silencewarnings::CSV.Arg, maxwarnings::CSV.Arg, debug::CSV.Arg, parsingdebug::CSV.Arg, validate::CSV.Arg, streaming::CSV.Arg) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:0 [5] CSV.Context(source::IOBuffer; header::Int64, normalizenames::Bool, datarow::Int64, skipto::Int64, footerskip::Int64, transpose::Bool, comment::Nothing, ignoreemptyrows::Bool, ignoreemptylines::Nothing, select::Nothing, drop::Nothing, limit::Nothing, buffer_in_memory::Bool, threaded::Nothing, ntasks::Nothing, tasks::Nothing, rows_to_check::Int64, lines_to_check::Nothing, missingstrings::Vector{String}, missingstring::String, delim::Nothing, ignorerepeated::Bool, quoted::Bool, quotechar::Char, openquotechar::Nothing, closequotechar::Nothing, escapechar::Char, dateformat::Nothing, dateformats::Nothing, decimal::UInt8, truestrings::Vector{String}, falsestrings::Vector{String}, type::Nothing, types::Nothing, typemap::Dict{Type, Type}, pool::Float64, downcast::Bool, lazystrings::Bool, stringtype::Type{InlineStrings.InlineString}, strict::Bool, silencewarnings::Bool, maxwarnings::Int64, debug::Bool, parsingdebug::Bool, validate::Bool) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:199 [6] CSV.Context(source::IOBuffer) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:147 [7] __init__() @ CSV ~/.julia/packages/CSV/9LsxT/src/CSV.jl:98 [8] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1411 [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1399 [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base ./loading.jl:1287 [11] _include_from_serialized @ ./loading.jl:1246 [inlined] [12] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2083 [13] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2595 [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2461 [15] macro expansion @ ./loading.jl:2389 [inlined] [16] macro expansion @ ./lock.jl:376 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2354 [18] require(into::Module, mod::Symbol) @ Base ./loading.jl:2330 [19] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:6 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [21] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:10 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [23] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/Schemata.jl:9 [24] include(mod::Module, _path::String) @ Base ./Base.jl:305 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2991 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2837 [29] include_string @ ./loading.jl:2847 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [31] _start() @ Base ./client.jl:554 during initialization of module CSV in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/Schemata.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Schemata [b4d66a32-c6c0-5461-b6fa-34bb9cecaf85] to "/home/pkgeval/.julia/compiled/v1.12/Schemata/jl_chwVXd". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3278 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2647 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3849 [10] maybe_cachefile_lock @ ./loading.jl:3846 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2633 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2461 [13] macro expansion @ ./loading.jl:2389 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2354 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2330 [17] top-level scope @ ~/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/unexported/config.jl:6 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [19] top-level scope @ ~/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/SpineBasedRecordLinkage.jl:7 [20] include(mod::Module, _path::String) @ Base ./Base.jl:305 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2991 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2837 [25] include_string @ ./loading.jl:2847 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [27] _start() @ Base ./client.jl:554 in expression starting at /home/pkgeval/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/unexported/config.jl:1 in expression starting at /home/pkgeval/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/SpineBasedRecordLinkage.jl:1 in expression starting at stdin:5 Schemata Failed to precompile Schemata [b4d66a32-c6c0-5461-b6fa-34bb9cecaf85] to "/home/pkgeval/.julia/compiled/v1.12/Schemata/jl_CSvs1y". ERROR: LoadError: InitError: TypeError: in typeassert, expected Tuple{Vector{UInt8}, Int64, Int64, Union{Nothing, String}}, got a value of type Nothing Stacktrace: [1] getsource(x::Any, buffer_in_memory::Bool) @ CSV ~/.julia/packages/CSV/9LsxT/src/utils.jl:295 [2] macro expansion @ ~/.julia/packages/CSV/9LsxT/src/context.jl:324 [inlined] [3] Context @ ./none:0 [inlined] [4] CSV.Context(source::CSV.Arg, header::CSV.Arg, normalizenames::CSV.Arg, datarow::CSV.Arg, skipto::CSV.Arg, footerskip::CSV.Arg, transpose::CSV.Arg, comment::CSV.Arg, ignoreemptyrows::CSV.Arg, ignoreemptylines::CSV.Arg, select::CSV.Arg, drop::CSV.Arg, limit::CSV.Arg, buffer_in_memory::CSV.Arg, threaded::CSV.Arg, ntasks::CSV.Arg, tasks::CSV.Arg, rows_to_check::CSV.Arg, lines_to_check::CSV.Arg, missingstrings::CSV.Arg, missingstring::CSV.Arg, delim::CSV.Arg, ignorerepeated::CSV.Arg, quoted::CSV.Arg, quotechar::CSV.Arg, openquotechar::CSV.Arg, closequotechar::CSV.Arg, escapechar::CSV.Arg, dateformat::CSV.Arg, dateformats::CSV.Arg, decimal::CSV.Arg, truestrings::CSV.Arg, falsestrings::CSV.Arg, type::CSV.Arg, types::CSV.Arg, typemap::CSV.Arg, pool::CSV.Arg, downcast::CSV.Arg, lazystrings::CSV.Arg, stringtype::CSV.Arg, strict::CSV.Arg, silencewarnings::CSV.Arg, maxwarnings::CSV.Arg, debug::CSV.Arg, parsingdebug::CSV.Arg, validate::CSV.Arg, streaming::CSV.Arg) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:0 [5] CSV.Context(source::IOBuffer; header::Int64, normalizenames::Bool, datarow::Int64, skipto::Int64, footerskip::Int64, transpose::Bool, comment::Nothing, ignoreemptyrows::Bool, ignoreemptylines::Nothing, select::Nothing, drop::Nothing, limit::Nothing, buffer_in_memory::Bool, threaded::Nothing, ntasks::Nothing, tasks::Nothing, rows_to_check::Int64, lines_to_check::Nothing, missingstrings::Vector{String}, missingstring::String, delim::Nothing, ignorerepeated::Bool, quoted::Bool, quotechar::Char, openquotechar::Nothing, closequotechar::Nothing, escapechar::Char, dateformat::Nothing, dateformats::Nothing, decimal::UInt8, truestrings::Vector{String}, falsestrings::Vector{String}, type::Nothing, types::Nothing, typemap::Dict{Type, Type}, pool::Float64, downcast::Bool, lazystrings::Bool, stringtype::Type{InlineStrings.InlineString}, strict::Bool, silencewarnings::Bool, maxwarnings::Int64, debug::Bool, parsingdebug::Bool, validate::Bool) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:199 [6] CSV.Context(source::IOBuffer) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:147 [7] __init__() @ CSV ~/.julia/packages/CSV/9LsxT/src/CSV.jl:98 [8] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1411 [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1399 [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base ./loading.jl:1287 [11] _include_from_serialized @ ./loading.jl:1246 [inlined] [12] _tryrequire_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing) @ Base ./loading.jl:1971 [13] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2662 [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2461 [15] macro expansion @ ./loading.jl:2389 [inlined] [16] macro expansion @ ./lock.jl:376 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2354 [18] require(into::Module, mod::Symbol) @ Base ./loading.jl:2330 [19] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:6 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [21] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:10 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [23] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/Schemata.jl:9 [24] include(mod::Module, _path::String) @ Base ./Base.jl:305 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2991 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2837 [29] include_string @ ./loading.jl:2847 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [31] _start() @ Base ./client.jl:554 during initialization of module CSV in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/Schemata.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 80.13s ################################################################################ # Testing # Testing SpineBasedRecordLinkage Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_xxa4pz/Project.toml` ⌅ [336ed68f] ↑ CSV v0.9.2 ⇒ v0.9.11 [a93c6f00] ↑ DataFrames v1.2.2 ⇒ v1.7.0 [c1ccfb80] + SpineBasedRecordLinkage v0.4.2 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_xxa4pz/Manifest.toml` ⌅ [336ed68f] ↑ CSV v0.9.2 ⇒ v0.9.11 [324d7699] ↑ CategoricalArrays v0.10.0 ⇒ v0.10.8 [944b1d66] ↑ CodecZlib v0.7.0 ⇒ v0.7.8 [34da2185] ↑ Compat v3.37.0 ⇒ v4.17.0 [a8cc5b0e] ↑ Crayons v4.0.4 ⇒ v4.1.1 [9a962f9c] ↑ DataAPI v1.8.0 ⇒ v1.16.0 [a93c6f00] ↑ DataFrames v1.2.2 ⇒ v1.7.0 [864edb3b] ↑ DataStructures v0.18.10 ⇒ v0.18.22 [8bb1440f] - DelimitedFiles [b4f34e82] + Distances v0.10.12 [48062228] ↑ FilePathsBase v0.9.10 ⇒ v0.9.24 [59287772] - Formatting v0.4.2 [842dd82b] + InlineStrings v1.4.4 [41ab1584] ↑ InvertedIndices v1.1.0 ⇒ v1.3.1 [682c06a0] - JSON v0.21.2 [b964fa9f] + LaTeXStrings v1.4.0 [e1d29d7a] ↑ Missings v1.0.2 ⇒ v1.2.0 [bac558e1] ↑ OrderedCollections v1.4.1 ⇒ v1.8.1 [69de0a69] ↑ Parsers v2.0.3 ⇒ v2.8.3 [2dfb63ee] ↑ PooledArrays v1.3.0 ⇒ v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] ↑ PrettyTables v1.1.0 ⇒ v2.4.0 [3cdcf5f2] - RecipesBase v1.1.2 [ae029012] + Requires v1.3.1 [91c51154] ↑ SentinelArrays v1.3.7 ⇒ v1.4.8 [a2af1166] ↑ SortingAlgorithms v1.0.1 ⇒ v1.2.1 [c1ccfb80] + SpineBasedRecordLinkage v0.4.2 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [88034a9c] + StringDistances v0.11.3 [892a3eda] + StringManipulation v0.4.1 [856f2bd8] - StructTypes v1.7.3 [bd369af6] ↑ Tables v1.5.2 ⇒ v1.12.1 [3bb67fe8] ↑ TranscodingStreams v0.9.6 ⇒ v0.11.3 [ea10d353] ↑ WeakRefStrings v1.3.0 ⇒ v1.4.2 [c8ffd9c3] - MbedTLS_jll [0dad84c5] - ArgTools [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] - Distributed [f43a241f] - Downloads [9fa8497b] ~ Future ⇒ v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] - LibCURL [76f85450] - LibGit2 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.12.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] ~ Mmap ⇒ v1.11.0 [ca575930] - NetworkOptions [44cfe95a] - Pkg [de0858da] ~ Printf ⇒ v1.11.0 [3fa0cd96] - REPL [9a3f8284] ~ Random ⇒ v1.11.0 [ea8e919c] ~ SHA ⇒ v0.7.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [1a1011a3] - SharedArrays [6462fe0b] - Sockets [2f01184e] - SparseArrays [f489334b] + StyledStrings v1.11.0 [fa267f1f] ~ TOML ⇒ v1.0.3 [a4e569a6] - Tar [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] - LibCURL_jll [29816b5a] - LibSSH2_jll [14a3606d] - MozillaCACerts_jll [4536629a] + OpenBLAS_jll v0.3.29+0 [83775a58] ~ Zlib_jll ⇒ v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] - nghttp2_jll [3f19e933] - p7zip_jll Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_xxa4pz/Project.toml` ⌅ [336ed68f] CSV v0.9.11 [a93c6f00] DataFrames v1.7.0 [b4d66a32] Schemata v3.0.2 [c1ccfb80] SpineBasedRecordLinkage v0.4.2 [8dfed614] Test v1.11.0 Status `/tmp/jl_xxa4pz/Manifest.toml` ⌅ [336ed68f] CSV v0.9.11 [324d7699] CategoricalArrays v0.10.8 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.17.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [b4f34e82] Distances v0.10.12 [48062228] FilePathsBase v0.9.24 [842dd82b] InlineStrings v1.4.4 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [b964fa9f] LaTeXStrings v1.4.0 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [b4d66a32] Schemata v3.0.2 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.1 [c1ccfb80] SpineBasedRecordLinkage v0.4.2 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [88034a9c] StringDistances v0.11.3 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [ea10d353] WeakRefStrings v1.4.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.29+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... ✗ Schemata Info Given SpineBasedRecordLinkage was explicitly requested, output will be shown live  ERROR: LoadError: InitError: TypeError: in typeassert, expected Tuple{Vector{UInt8}, Int64, Int64, Union{Nothing, String}}, got a value of type Nothing Stacktrace:  [1] getsource(x::Any, buffer_in_memory::Bool)  @ CSV ~/.julia/packages/CSV/9LsxT/src/utils.jl:295  [2] macro expansion  @ ~/.julia/packages/CSV/9LsxT/src/context.jl:324 [inlined]  [3] Context  @ ./none:0 [inlined]  [4] CSV.Context(source::CSV.Arg, header::CSV.Arg, normalizenames::CSV.Arg, datarow::CSV.Arg, skipto::CSV.Arg, footerskip::CSV.Arg, transpose::CSV.Arg, comment::CSV.Arg, ignoreemptyrows::CSV.Arg, ignoreemptylines::CSV.Arg, select::CSV.Arg, drop::CSV.Arg, limit::CSV.Arg, buffer_in_memory::CSV.Arg, threaded::CSV.Arg, ntasks::CSV.Arg, tasks::CSV.Arg, rows_to_check::CSV.Arg, lines_to_check::CSV.Arg, missingstrings::CSV.Arg, missingstring::CSV.Arg, delim::CSV.Arg, ignorerepeated::CSV.Arg, quoted::CSV.Arg, quotechar::CSV.Arg, openquotechar::CSV.Arg, closequotechar::CSV.Arg, escapechar::CSV.Arg, dateformat::CSV.Arg, dateformats::CSV.Arg, decimal::CSV.Arg, truestrings::CSV.Arg, falsestrings::CSV.Arg, type::CSV.Arg, types::CSV.Arg, typemap::CSV.Arg, pool::CSV.Arg, downcast::CSV.Arg, lazystrings::CSV.Arg, stringtype::CSV.Arg, strict::CSV.Arg, silencewarnings::CSV.Arg, maxwarnings::CSV.Arg, debug::CSV.Arg, parsingdebug::CSV.Arg, validate::CSV.Arg, streaming::CSV.Arg)  @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:0  [5] CSV.Context(source::IOBuffer; header::Int64, normalizenames::Bool, datarow::Int64, skipto::Int64, footerskip::Int64, transpose::Bool, comment::Nothing, ignoreemptyrows::Bool, ignoreemptylines::Nothing, select::Nothing, drop::Nothing, limit::Nothing, buffer_in_memory::Bool, threaded::Nothing, ntasks::Nothing, tasks::Nothing, rows_to_check::Int64, lines_to_check::Nothing, missingstrings::Vector{String}, missingstring::String, delim::Nothing, ignorerepeated::Bool, quoted::Bool, quotechar::Char, openquotechar::Nothing, closequotechar::Nothing, escapechar::Char, dateformat::Nothing, dateformats::Nothing, decimal::UInt8, truestrings::Vector{String}, falsestrings::Vector{String}, type::Nothing, types::Nothing, typemap::Dict{Type, Type}, pool::Float64, downcast::Bool, lazystrings::Bool, stringtype::Type{InlineStrings.InlineString}, strict::Bool, silencewarnings::Bool, maxwarnings::Int64, debug::Bool, parsingdebug::Bool, validate::Bool)  @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:199  [6] CSV.Context(source::IOBuffer)  @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:147  [7] __init__()  @ CSV ~/.julia/packages/CSV/9LsxT/src/CSV.jl:98  [8] run_module_init(mod::Module, i::Int64)  @ Base ./loading.jl:1411  [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)  @ Base ./loading.jl:1399  [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool)  @ Base ./loading.jl:1287  [11] _include_from_serialized  @ ./loading.jl:1246 [inlined]  [12] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2083  [13] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2595  [14] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2461  [15] macro expansion  @ ./loading.jl:2389 [inlined]  [16] macro expansion  @ ./lock.jl:376 [inlined]  [17] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2354  [18] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2330  [19] top-level scope  @ ~/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:6  [20] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:306  [21] top-level scope  @ ~/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:10  [22] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:306  [23] top-level scope  @ ~/.julia/packages/Schemata/fWoTd/src/Schemata.jl:9  [24] include(mod::Module, _path::String)  @ Base ./Base.jl:305  [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:2991  [26] top-level scope  @ stdin:5  [27] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2837  [29] include_string  @ ./loading.jl:2847 [inlined]  [30] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:319  [31] _start()  @ Base ./client.jl:554 during initialization of module CSV in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/Schemata.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Schemata [b4d66a32-c6c0-5461-b6fa-34bb9cecaf85] to "/home/pkgeval/.julia/compiled/v1.12/Schemata/jl_pIEeU6". Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3278  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2647  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114  [7] #invokelatest_gr#232  @ ./reflection.jl:1282 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1274 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3849  [10] maybe_cachefile_lock  @ ./loading.jl:3846 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2633  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2461  [13] macro expansion  @ ./loading.jl:2389 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2354  [16] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2330  [17] top-level scope  @ ~/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/unexported/config.jl:6  [18] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:306  [19] top-level scope  @ ~/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/SpineBasedRecordLinkage.jl:7  [20] include(mod::Module, _path::String)  @ Base ./Base.jl:305  [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2991  [22] top-level scope  @ stdin:5  [23] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2837  [25] include_string  @ ./loading.jl:2847 [inlined]  [26] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:319  [27] _start()  @ Base ./client.jl:554 in expression starting at /home/pkgeval/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/unexported/config.jl:1 in expression starting at /home/pkgeval/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/SpineBasedRecordLinkage.jl:1 in expression starting at stdin:5 ✗ SpineBasedRecordLinkage 0 dependencies successfully precompiled in 47 seconds. 52 already precompiled. ERROR: LoadError: The following 2 direct dependencies failed to precompile: SpineBasedRecordLinkage Failed to precompile SpineBasedRecordLinkage [c1ccfb80-616c-11e9-2032-47e8246e4458] to "/home/pkgeval/.julia/compiled/v1.12/SpineBasedRecordLinkage/jl_ZKumil". ERROR: LoadError: InitError: TypeError: in typeassert, expected Tuple{Vector{UInt8}, Int64, Int64, Union{Nothing, String}}, got a value of type Nothing Stacktrace: [1] getsource(x::Any, buffer_in_memory::Bool) @ CSV ~/.julia/packages/CSV/9LsxT/src/utils.jl:295 [2] macro expansion @ ~/.julia/packages/CSV/9LsxT/src/context.jl:324 [inlined] [3] Context @ ./none:0 [inlined] [4] CSV.Context(source::CSV.Arg, header::CSV.Arg, normalizenames::CSV.Arg, datarow::CSV.Arg, skipto::CSV.Arg, footerskip::CSV.Arg, transpose::CSV.Arg, comment::CSV.Arg, ignoreemptyrows::CSV.Arg, ignoreemptylines::CSV.Arg, select::CSV.Arg, drop::CSV.Arg, limit::CSV.Arg, buffer_in_memory::CSV.Arg, threaded::CSV.Arg, ntasks::CSV.Arg, tasks::CSV.Arg, rows_to_check::CSV.Arg, lines_to_check::CSV.Arg, missingstrings::CSV.Arg, missingstring::CSV.Arg, delim::CSV.Arg, ignorerepeated::CSV.Arg, quoted::CSV.Arg, quotechar::CSV.Arg, openquotechar::CSV.Arg, closequotechar::CSV.Arg, escapechar::CSV.Arg, dateformat::CSV.Arg, dateformats::CSV.Arg, decimal::CSV.Arg, truestrings::CSV.Arg, falsestrings::CSV.Arg, type::CSV.Arg, types::CSV.Arg, typemap::CSV.Arg, pool::CSV.Arg, downcast::CSV.Arg, lazystrings::CSV.Arg, stringtype::CSV.Arg, strict::CSV.Arg, silencewarnings::CSV.Arg, maxwarnings::CSV.Arg, debug::CSV.Arg, parsingdebug::CSV.Arg, validate::CSV.Arg, streaming::CSV.Arg) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:0 [5] CSV.Context(source::IOBuffer; header::Int64, normalizenames::Bool, datarow::Int64, skipto::Int64, footerskip::Int64, transpose::Bool, comment::Nothing, ignoreemptyrows::Bool, ignoreemptylines::Nothing, select::Nothing, drop::Nothing, limit::Nothing, buffer_in_memory::Bool, threaded::Nothing, ntasks::Nothing, tasks::Nothing, rows_to_check::Int64, lines_to_check::Nothing, missingstrings::Vector{String}, missingstring::String, delim::Nothing, ignorerepeated::Bool, quoted::Bool, quotechar::Char, openquotechar::Nothing, closequotechar::Nothing, escapechar::Char, dateformat::Nothing, dateformats::Nothing, decimal::UInt8, truestrings::Vector{String}, falsestrings::Vector{String}, type::Nothing, types::Nothing, typemap::Dict{Type, Type}, pool::Float64, downcast::Bool, lazystrings::Bool, stringtype::Type{InlineStrings.InlineString}, strict::Bool, silencewarnings::Bool, maxwarnings::Int64, debug::Bool, parsingdebug::Bool, validate::Bool) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:199 [6] CSV.Context(source::IOBuffer) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:147 [7] __init__() @ CSV ~/.julia/packages/CSV/9LsxT/src/CSV.jl:98 [8] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1411 [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1399 [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base ./loading.jl:1287 [11] _include_from_serialized @ ./loading.jl:1246 [inlined] [12] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2083 [13] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2595 [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2461 [15] macro expansion @ ./loading.jl:2389 [inlined] [16] macro expansion @ ./lock.jl:376 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2354 [18] require(into::Module, mod::Symbol) @ Base ./loading.jl:2330 [19] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:6 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [21] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:10 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [23] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/Schemata.jl:9 [24] include(mod::Module, _path::String) @ Base ./Base.jl:305 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2991 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2837 [29] include_string @ ./loading.jl:2847 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [31] _start() @ Base ./client.jl:554 during initialization of module CSV in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/Schemata.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Schemata [b4d66a32-c6c0-5461-b6fa-34bb9cecaf85] to "/home/pkgeval/.julia/compiled/v1.12/Schemata/jl_pIEeU6". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3278 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2647 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3849 [10] maybe_cachefile_lock @ ./loading.jl:3846 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2633 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2461 [13] macro expansion @ ./loading.jl:2389 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2354 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2330 [17] top-level scope @ ~/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/unexported/config.jl:6 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [19] top-level scope @ ~/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/SpineBasedRecordLinkage.jl:7 [20] include(mod::Module, _path::String) @ Base ./Base.jl:305 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2991 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2837 [25] include_string @ ./loading.jl:2847 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [27] _start() @ Base ./client.jl:554 in expression starting at /home/pkgeval/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/unexported/config.jl:1 in expression starting at /home/pkgeval/.julia/packages/SpineBasedRecordLinkage/fKjGO/src/SpineBasedRecordLinkage.jl:1 in expression starting at stdin:5 Schemata Failed to precompile Schemata [b4d66a32-c6c0-5461-b6fa-34bb9cecaf85] to "/home/pkgeval/.julia/compiled/v1.12/Schemata/jl_5kel3r". ERROR: LoadError: InitError: TypeError: in typeassert, expected Tuple{Vector{UInt8}, Int64, Int64, Union{Nothing, String}}, got a value of type Nothing Stacktrace: [1] getsource(x::Any, buffer_in_memory::Bool) @ CSV ~/.julia/packages/CSV/9LsxT/src/utils.jl:295 [2] macro expansion @ ~/.julia/packages/CSV/9LsxT/src/context.jl:324 [inlined] [3] Context @ ./none:0 [inlined] [4] CSV.Context(source::CSV.Arg, header::CSV.Arg, normalizenames::CSV.Arg, datarow::CSV.Arg, skipto::CSV.Arg, footerskip::CSV.Arg, transpose::CSV.Arg, comment::CSV.Arg, ignoreemptyrows::CSV.Arg, ignoreemptylines::CSV.Arg, select::CSV.Arg, drop::CSV.Arg, limit::CSV.Arg, buffer_in_memory::CSV.Arg, threaded::CSV.Arg, ntasks::CSV.Arg, tasks::CSV.Arg, rows_to_check::CSV.Arg, lines_to_check::CSV.Arg, missingstrings::CSV.Arg, missingstring::CSV.Arg, delim::CSV.Arg, ignorerepeated::CSV.Arg, quoted::CSV.Arg, quotechar::CSV.Arg, openquotechar::CSV.Arg, closequotechar::CSV.Arg, escapechar::CSV.Arg, dateformat::CSV.Arg, dateformats::CSV.Arg, decimal::CSV.Arg, truestrings::CSV.Arg, falsestrings::CSV.Arg, type::CSV.Arg, types::CSV.Arg, typemap::CSV.Arg, pool::CSV.Arg, downcast::CSV.Arg, lazystrings::CSV.Arg, stringtype::CSV.Arg, strict::CSV.Arg, silencewarnings::CSV.Arg, maxwarnings::CSV.Arg, debug::CSV.Arg, parsingdebug::CSV.Arg, validate::CSV.Arg, streaming::CSV.Arg) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:0 [5] CSV.Context(source::IOBuffer; header::Int64, normalizenames::Bool, datarow::Int64, skipto::Int64, footerskip::Int64, transpose::Bool, comment::Nothing, ignoreemptyrows::Bool, ignoreemptylines::Nothing, select::Nothing, drop::Nothing, limit::Nothing, buffer_in_memory::Bool, threaded::Nothing, ntasks::Nothing, tasks::Nothing, rows_to_check::Int64, lines_to_check::Nothing, missingstrings::Vector{String}, missingstring::String, delim::Nothing, ignorerepeated::Bool, quoted::Bool, quotechar::Char, openquotechar::Nothing, closequotechar::Nothing, escapechar::Char, dateformat::Nothing, dateformats::Nothing, decimal::UInt8, truestrings::Vector{String}, falsestrings::Vector{String}, type::Nothing, types::Nothing, typemap::Dict{Type, Type}, pool::Float64, downcast::Bool, lazystrings::Bool, stringtype::Type{InlineStrings.InlineString}, strict::Bool, silencewarnings::Bool, maxwarnings::Int64, debug::Bool, parsingdebug::Bool, validate::Bool) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:199 [6] CSV.Context(source::IOBuffer) @ CSV ~/.julia/packages/CSV/9LsxT/src/context.jl:147 [7] __init__() @ CSV ~/.julia/packages/CSV/9LsxT/src/CSV.jl:98 [8] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1411 [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1399 [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base ./loading.jl:1287 [11] _include_from_serialized @ ./loading.jl:1246 [inlined] [12] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2083 [13] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2595 [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2461 [15] macro expansion @ ./loading.jl:2389 [inlined] [16] macro expansion @ ./lock.jl:376 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2354 [18] require(into::Module, mod::Symbol) @ Base ./loading.jl:2330 [19] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:6 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [21] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:10 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [23] top-level scope @ ~/.julia/packages/Schemata/fWoTd/src/Schemata.jl:9 [24] include(mod::Module, _path::String) @ Base ./Base.jl:305 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2991 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2837 [29] include_string @ ./loading.jl:2847 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [31] _start() @ Base ./client.jl:554 during initialization of module CSV in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare/ondisk_table.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/compare_table_to_schema.jl:1 in expression starting at /home/pkgeval/.julia/packages/Schemata/fWoTd/src/Schemata.jl:1 in expression starting at stdin:5 in expression starting at /home/pkgeval/.julia/packages/SpineBasedRecordLinkage/fKjGO/test/runtests.jl:2 Testing failed after 57.69s ERROR: LoadError: Package SpineBasedRecordLinkage errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2458 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2313 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:511 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:305 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:321 [12] _start() @ Base ./client.jl:554 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 168.13s: package fails to precompile