Package evaluation of SegmentAnything on Julia 1.12.0-rc1.2 (995ff9db19*) started at 2025-07-14T16:19:42.660


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.6s


################################################################################
# Installation
#

Installing SegmentAnything...
   Resolving package versions...
   Installed SegmentAnything ─ v0.1.0
    Updating `~/.julia/environments/v1.12/Project.toml`
  [daca4e5c] + SegmentAnything v0.1.0
    Updating `~/.julia/environments/v1.12/Manifest.toml`
⌅ [3da002f7] + ColorTypes v0.11.5
  [992eb4ea] + CondaPkg v0.2.29
  [187b0558] + ConstructionBase v1.6.0
  [9a962f9c] + DataAPI v1.16.0
  [e2d170a0] + DataValueInterfaces v1.0.0
  [411431e0] + Extents v0.1.6
  [53c48c17] + FixedPointNumbers v0.8.5
  [68eda718] + GeoFormatTypes v0.4.4
⌃ [cf35fbd7] + GeoInterface v1.4.1
⌅ [5c1252a2] + GeometryBasics v0.4.11
  [c8e1da08] + IterTools v1.10.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [0f8b85d8] + JSON3 v1.14.3
  [1914dd2f] + MacroTools v0.5.16
  [0b3b1443] + MicroMamba v0.1.14
  [bac558e1] + OrderedCollections v1.8.1
  [69de0a69] + Parsers v2.8.3
  [fa939f87] + Pidfile v1.3.0
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.4.3
  [6099a3de] + PythonCall v0.9.25
  [ae029012] + Requires v1.3.1
  [6c6a2e73] + Scratch v1.3.0
  [daca4e5c] + SegmentAnything v0.1.0
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
⌅ [09ab397b] + StructArrays v0.6.21
  [856f2bd8] + StructTypes v1.11.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [e17b2a0c] + UnsafePointers v1.0.0
  [5ae413db] + EarCut_jll v2.2.4+0
  [f8abcde7] + micromamba_jll v1.5.8+0
  [4d7b5844] + pixi_jll v0.41.3+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.11.1+1
  [e37daf67] + LibGit2_jll v1.9.0+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.5.20
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.13.1+0
  [8e850ede] + nghttp2_jll v1.64.0+1
  [3f19e933] + p7zip_jll v17.5.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`
    Building SegmentAnything → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/2ab97b53a7102de401626a629e5584678ff86343/build.log`

Installation completed after 25.61s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 168.32s


################################################################################
# Testing
#

     Testing SegmentAnything
      Status `/tmp/jl_Df3xwD/Project.toml`
⌅ [3da002f7] ColorTypes v0.11.5
  [992eb4ea] CondaPkg v0.2.29
⌅ [5c1252a2] GeometryBasics v0.4.11
  [6099a3de] PythonCall v0.9.25
  [daca4e5c] SegmentAnything v0.1.0
  [f43a241f] Downloads v1.6.0
      Status `/tmp/jl_Df3xwD/Manifest.toml`
⌅ [3da002f7] ColorTypes v0.11.5
  [992eb4ea] CondaPkg v0.2.29
  [187b0558] ConstructionBase v1.6.0
  [9a962f9c] DataAPI v1.16.0
  [e2d170a0] DataValueInterfaces v1.0.0
  [411431e0] Extents v0.1.6
  [53c48c17] FixedPointNumbers v0.8.5
  [68eda718] GeoFormatTypes v0.4.4
⌃ [cf35fbd7] GeoInterface v1.4.1
⌅ [5c1252a2] GeometryBasics v0.4.11
  [c8e1da08] IterTools v1.10.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [0f8b85d8] JSON3 v1.14.3
  [1914dd2f] MacroTools v0.5.16
  [0b3b1443] MicroMamba v0.1.14
  [bac558e1] OrderedCollections v1.8.1
  [69de0a69] Parsers v2.8.3
  [fa939f87] Pidfile v1.3.0
  [aea7be01] PrecompileTools v1.3.2
  [21216c6a] Preferences v1.4.3
  [6099a3de] PythonCall v0.9.25
  [ae029012] Requires v1.3.1
  [6c6a2e73] Scratch v1.3.0
  [daca4e5c] SegmentAnything v0.1.0
  [90137ffa] StaticArrays v1.9.13
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
⌅ [09ab397b] StructArrays v0.6.21
  [856f2bd8] StructTypes v1.11.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [e17b2a0c] UnsafePointers v1.0.0
  [5ae413db] EarCut_jll v2.2.4+0
  [f8abcde7] micromamba_jll v1.5.8+0
  [4d7b5844] pixi_jll v0.41.3+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.11.1+1
  [e37daf67] LibGit2_jll v1.9.0+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.5.20
  [4536629a] OpenBLAS_jll v0.3.29+0
  [458c3c95] OpenSSL_jll v3.5.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.13.1+0
  [8e850ede] nghttp2_jll v1.64.0+1
  [3f19e933] p7zip_jll v17.5.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
    CondaPkg Found dependencies: /home/pkgeval/.julia/packages/SegmentAnything/uDUsK/CondaPkg.toml
    CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/L4cjh/CondaPkg.toml
    CondaPkg Resolving changes
             + libstdcxx-ng
             + numpy
             + opencv
             + openssl
             + python
             + pytorch
             + pytorch-cuda
             + segment-anything (pip)
             + torchaudio
             + torchvision
             + uv
    CondaPkg Initialising pixi
             │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi
             │ init
             │ --format pixi
             └ /tmp/jl_Df3xwD/.CondaPkg
✔ Created /tmp/jl_Df3xwD/.CondaPkg/pixi.toml
    CondaPkg Wrote /tmp/jl_Df3xwD/.CondaPkg/pixi.toml
             │ [dependencies]
             │ pytorch-cuda = "*"
             │ opencv = "*"
             │ openssl = ">=3, <3.6"
             │ uv = ">=0.4"
             │ libstdcxx-ng = ">=3.4,<15.0"
             │ pytorch = "*"
             │ torchvision = "*"
             │ numpy = "*"
             │ torchaudio = "*"
             │ 
             │     [dependencies.python]
             │     channel = "conda-forge"
             │     build = "*cpython*"
             │     version = ">=3.8,<4"
             │ 
             │ [project]
             │ name = ".CondaPkg"
             │ platforms = ["linux-64"]
             │ channels = ["conda-forge", "nvidia", "pytorch"]
             │ channel-priority = "strict"
             │ description = "automatically generated by CondaPkg.jl"
             │ 
             │ [pypi-dependencies.segment-anything]
             └ git = "https://github.com/facebookresearch/segment-anything.git"
    CondaPkg Installing packages
             │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi
             │ install
             └ --manifest-path /tmp/jl_Df3xwD/.CondaPkg/pixi.toml
✔ The default environment has been installed.
ERROR: LoadError: InitError: Python: OSError: libmkl_gnu_thread.so.2: cannot open shared object file: No such file or directory
Python stacktrace:
 [1] __init__
   @ ctypes /tmp/jl_Df3xwD/.CondaPkg/.pixi/envs/default/lib/python3.12/ctypes/__init__.py:379
 [2] _load_global_deps
   @ /tmp/jl_Df3xwD/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/torch/__init__.py:312
 [3] _load_global_deps
   @ /tmp/jl_Df3xwD/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/torch/__init__.py:364
 [4] <module>
   @ /tmp/jl_Df3xwD/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/torch/__init__.py:408
 [5] <module>
   @ /tmp/jl_Df3xwD/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/segment_anything/build_sam.py:7
 [6] <module>
   @ /tmp/jl_Df3xwD/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/segment_anything/__init__.py:7
Stacktrace:
  [1] pythrow()
    @ PythonCall.Core ~/.julia/packages/PythonCall/L4cjh/src/Core/err.jl:92
  [2] errcheck
    @ ~/.julia/packages/PythonCall/L4cjh/src/Core/err.jl:10 [inlined]
  [3] pyimport(m::String)
    @ PythonCall.Core ~/.julia/packages/PythonCall/L4cjh/src/Core/builtins.jl:1561
  [4] __init__()
    @ SegmentAnything ~/.julia/packages/SegmentAnything/uDUsK/src/SegmentAnything.jl:25
  [5] run_module_init(mod::Module, i::Int64)
    @ Base ./loading.jl:1411
  [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1399
  [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool)
    @ Base ./loading.jl:1287
  [8] _include_from_serialized
    @ ./loading.jl:1246 [inlined]
  [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
    @ Base ./loading.jl:2083
 [10] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2595
 [11] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2461
 [12] macro expansion
    @ ./loading.jl:2389 [inlined]
 [13] macro expansion
    @ ./lock.jl:376 [inlined]
 [14] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2354
 [15] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2330
 [16] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:306
 [17] top-level scope
    @ none:6
 [18] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [19] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:287
 [20] _start()
    @ Base ./client.jl:554
during initialization of module SegmentAnything
in expression starting at /home/pkgeval/.julia/packages/SegmentAnything/uDUsK/test/runtests.jl:1

Testing failed after 99.17s

ERROR: LoadError: Package SegmentAnything errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2458
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2313 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:511
  [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:305
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:321
 [12] _start()
    @ Base ./client.jl:554
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 359.98s: package requires a missing binary dependency